Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0246
(621 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70311-11|CAA94380.1| 484|Caenorhabditis elegans Hypothetical p... 258 2e-69
Z70306-6|CAA94326.1| 484|Caenorhabditis elegans Hypothetical pr... 258 2e-69
Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical p... 33 0.16
Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical p... 33 0.16
Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical p... 33 0.16
Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical pr... 33 0.16
Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical pr... 33 0.16
Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical pr... 33 0.16
X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein. 33 0.16
AC006708-23|AAF60414.1| 975|Caenorhabditis elegans Paz/piwi dom... 29 3.5
U15167-1|AAB66360.1| 445|Caenorhabditis elegans serotonin recep... 28 6.2
AC084154-13|AAK29875.2| 445|Caenorhabditis elegans Serotonin/oc... 28 6.2
>Z70311-11|CAA94380.1| 484|Caenorhabditis elegans Hypothetical
protein T25B9.9 protein.
Length = 484
Score = 258 bits (633), Expect = 2e-69
Identities = 112/170 (65%), Positives = 143/170 (84%)
Frame = +3
Query: 111 EADIALIGLAVMGQNLILNMNDKGYVVCAFNRTVSKVEEFLKNEAKGTKVIGATSLDDMV 290
EADIA+IGLAVMGQNLILNMND G+ VCAFNRTV V++FL NEAKGTK+IGA S+++M
Sbjct: 3 EADIAVIGLAVMGQNLILNMNDHGFTVCAFNRTVKLVDDFLANEAKGTKIIGAHSIEEMC 62
Query: 291 SKLKRPRKIVLLVKAGFAVDEFVKKLIPLLSKGDIIIDGGNSQYLDTQKWCKELSGTGIL 470
KLKRPR++++L+KAG VD + ++P L +GDIIIDGGNS+Y D+ + ++L+ GI+
Sbjct: 63 KKLKRPRRVMMLIKAGTPVDMMIDAIVPHLEEGDIIIDGGNSEYTDSNRRSEQLAAKGIM 122
Query: 471 YVGMGVSGGEDGARYGPSLMPGGHPAAWPHIKEIFQAICAKANDEPCCDW 620
+VG GVSGGE+GAR+GPSLMPGG+P AWPH+K+IFQ I AK+N EPCCDW
Sbjct: 123 FVGCGVSGGEEGARFGPSLMPGGNPKAWPHLKDIFQKIAAKSNGEPCCDW 172
>Z70306-6|CAA94326.1| 484|Caenorhabditis elegans Hypothetical
protein T25B9.9 protein.
Length = 484
Score = 258 bits (633), Expect = 2e-69
Identities = 112/170 (65%), Positives = 143/170 (84%)
Frame = +3
Query: 111 EADIALIGLAVMGQNLILNMNDKGYVVCAFNRTVSKVEEFLKNEAKGTKVIGATSLDDMV 290
EADIA+IGLAVMGQNLILNMND G+ VCAFNRTV V++FL NEAKGTK+IGA S+++M
Sbjct: 3 EADIAVIGLAVMGQNLILNMNDHGFTVCAFNRTVKLVDDFLANEAKGTKIIGAHSIEEMC 62
Query: 291 SKLKRPRKIVLLVKAGFAVDEFVKKLIPLLSKGDIIIDGGNSQYLDTQKWCKELSGTGIL 470
KLKRPR++++L+KAG VD + ++P L +GDIIIDGGNS+Y D+ + ++L+ GI+
Sbjct: 63 KKLKRPRRVMMLIKAGTPVDMMIDAIVPHLEEGDIIIDGGNSEYTDSNRRSEQLAAKGIM 122
Query: 471 YVGMGVSGGEDGARYGPSLMPGGHPAAWPHIKEIFQAICAKANDEPCCDW 620
+VG GVSGGE+GAR+GPSLMPGG+P AWPH+K+IFQ I AK+N EPCCDW
Sbjct: 123 FVGCGVSGGEEGARFGPSLMPGGNPKAWPHLKDIFQKIAAKSNGEPCCDW 172
>Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical
protein ZK617.1c protein.
Length = 6629
Score = 33.1 bits (72), Expect = 0.16
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +3
Query: 324 LVKAGFAVDEFVKKLIPLLSKGDII-IDGGNSQYLDTQKWCKELSGT 461
++K G +DE ++KL+ ++ K D+ I N Q DT KW EL +
Sbjct: 1004 ILKNGKPIDEEMRKLVEVIIKDDVAEIVFKNPQLADTGKWALELGNS 1050
>Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 33.1 bits (72), Expect = 0.16
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +3
Query: 324 LVKAGFAVDEFVKKLIPLLSKGDII-IDGGNSQYLDTQKWCKELSGT 461
++K G +DE ++KL+ ++ K D+ I N Q DT KW EL +
Sbjct: 1533 ILKNGKPIDEEMRKLVEVIIKDDVAEIVFKNPQLADTGKWALELGNS 1579
>Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical
protein ZK617.1a protein.
Length = 6839
Score = 33.1 bits (72), Expect = 0.16
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +3
Query: 324 LVKAGFAVDEFVKKLIPLLSKGDII-IDGGNSQYLDTQKWCKELSGT 461
++K G +DE ++KL+ ++ K D+ I N Q DT KW EL +
Sbjct: 1214 ILKNGKPIDEEMRKLVEVIIKDDVAEIVFKNPQLADTGKWALELGNS 1260
>Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical protein
ZK617.1c protein.
Length = 6629
Score = 33.1 bits (72), Expect = 0.16
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +3
Query: 324 LVKAGFAVDEFVKKLIPLLSKGDII-IDGGNSQYLDTQKWCKELSGT 461
++K G +DE ++KL+ ++ K D+ I N Q DT KW EL +
Sbjct: 1004 ILKNGKPIDEEMRKLVEVIIKDDVAEIVFKNPQLADTGKWALELGNS 1050
>Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical protein
ZK617.1b protein.
Length = 7158
Score = 33.1 bits (72), Expect = 0.16
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +3
Query: 324 LVKAGFAVDEFVKKLIPLLSKGDII-IDGGNSQYLDTQKWCKELSGT 461
++K G +DE ++KL+ ++ K D+ I N Q DT KW EL +
Sbjct: 1533 ILKNGKPIDEEMRKLVEVIIKDDVAEIVFKNPQLADTGKWALELGNS 1579
>Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical protein
ZK617.1a protein.
Length = 6839
Score = 33.1 bits (72), Expect = 0.16
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +3
Query: 324 LVKAGFAVDEFVKKLIPLLSKGDII-IDGGNSQYLDTQKWCKELSGT 461
++K G +DE ++KL+ ++ K D+ I N Q DT KW EL +
Sbjct: 1214 ILKNGKPIDEEMRKLVEVIIKDDVAEIVFKNPQLADTGKWALELGNS 1260
>X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein.
Length = 6048
Score = 33.1 bits (72), Expect = 0.16
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +3
Query: 324 LVKAGFAVDEFVKKLIPLLSKGDII-IDGGNSQYLDTQKWCKELSGT 461
++K G +DE ++KL+ ++ K D+ I N Q DT KW EL +
Sbjct: 423 ILKNGKPIDEEMRKLVEVIIKDDVAEIVFKNPQLADTGKWALELGNS 469
>AC006708-23|AAF60414.1| 975|Caenorhabditis elegans Paz/piwi
domain-containing protein2 protein.
Length = 975
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/47 (29%), Positives = 27/47 (57%)
Frame = +3
Query: 375 LLSKGDIIIDGGNSQYLDTQKWCKELSGTGILYVGMGVSGGEDGARY 515
+++K ++ + G N YLDT+ + +E L +G+G+S G +Y
Sbjct: 655 VINKTNVKLGGSNYVYLDTKNFLQE-----HLIIGVGISSPPPGTKY 696
>U15167-1|AAB66360.1| 445|Caenorhabditis elegans serotonin receptor
precursor protein.
Length = 445
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -3
Query: 427 SKYCELPPSIIISPLLKSGISFFTNSSTANP 335
SK C LPP+++IS + +G + +S NP
Sbjct: 272 SKKCPLPPAVVISDIQANGGTGGKTNSIKNP 302
>AC084154-13|AAK29875.2| 445|Caenorhabditis elegans
Serotonin/octopamine receptor familyprotein 4 protein.
Length = 445
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -3
Query: 427 SKYCELPPSIIISPLLKSGISFFTNSSTANP 335
SK C LPP+++IS + +G + +S NP
Sbjct: 272 SKKCPLPPAVVISDIQANGGTGGKTNSIKNP 302
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,314,490
Number of Sequences: 27780
Number of extensions: 295113
Number of successful extensions: 704
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 681
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 703
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1353389824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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