Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0236
         (756 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_04_0658 - 24793219-24794109                                         28   7.0  
07_01_0652 + 4895366-4895483,4895661-4896262                           28   9.2  

>02_04_0658 - 24793219-24794109
          Length = 296

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 18/64 (28%), Positives = 29/64 (45%)
 Frame = +3

Query: 249 IKGTLLYLHKRVKFPSFVTVILLSKAFVYFIEYEFLNAI*AFLSYIKIISPYWALLENLI 428
           IK   L LH    F     +++++    Y + + F   + A L +I I+ PYW +     
Sbjct: 222 IKKFSLRLHLLFSF----ALMIMTLGVTYQLHHMFFILLLALLVFISIVCPYWLIRIQEY 277

Query: 429 VFEI 440
            FEI
Sbjct: 278 KFEI 281


>07_01_0652 + 4895366-4895483,4895661-4896262
          Length = 239

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = +1

Query: 586 YMNVKYEPNNCGEAFSR*MIRIVKKRDSLLHFDSAFE 696
           YM   Y   +C +   R + ++V+KRDS +H  SAF+
Sbjct: 134 YMECAYYRKDCRK-LRRFISKVVEKRDSAMHACSAFK 169


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,473,204
Number of Sequences: 37544
Number of extensions: 271018
Number of successful extensions: 446
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 434
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 446
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2016060588
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)