Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0234
         (689 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    23   1.8  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   1.8  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   1.8  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       23   2.4  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   4.1  
AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like prote...    22   4.1  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   4.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   7.2  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   7.2  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    21   7.2  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   7.2  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    21   7.2  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    21   7.2  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      21   7.2  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      21   7.2  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    21   9.5  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    21   9.5  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    21   9.5  

>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = -2

Query: 514 KTFFIHLLKTYTCFFFLIP 458
           K   IHLL+ Y C F L P
Sbjct: 270 KRKLIHLLQEYRCIFSLRP 288


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 13/42 (30%), Positives = 24/42 (57%)
 Frame = -1

Query: 551  QKINIFKFITDVKNIFYSFIKNVYMFFFFNSILVSIGGCVQL 426
            +K  I K + +++N      K+V+ FF FN++ V +   +QL
Sbjct: 1253 EKARIAKELIELRN------KSVFAFFMFNALFVLVVFLLQL 1288


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 13/42 (30%), Positives = 24/42 (57%)
 Frame = -1

Query: 551  QKINIFKFITDVKNIFYSFIKNVYMFFFFNSILVSIGGCVQL 426
            +K  I K + +++N      K+V+ FF FN++ V +   +QL
Sbjct: 1253 EKARIAKELIELRN------KSVFAFFMFNALFVLVVFLLQL 1288


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = +3

Query: 48  HFKLXXXXXXQFICPRCPFTSK 113
           H K+      +  CP+CPF ++
Sbjct: 220 HSKVHIREDKRLTCPKCPFITE 241


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -1

Query: 515 KNIFYSFIKNVYMFF 471
           KN+ +S I NV M+F
Sbjct: 745 KNLIFSLIANVAMYF 759


>AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like protein
           protein.
          Length = 160

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 10/39 (25%), Positives = 22/39 (56%)
 Frame = +2

Query: 71  LVSIYLPKMSIHIKDSDDLKTRLAEAGDKLVVIDFMATW 187
           L  +++ + SI+++  + LKT+     DKL +  + + W
Sbjct: 104 LYQVFVFRRSIYLQIKERLKTQGISHLDKLQLGQYFSPW 142


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = +1

Query: 79  NLSAQDVHSHQRFRRPEDKAGGSRRQARRDR 171
           N   ++ H  +   R   ++GG RRQ R  R
Sbjct: 565 NHMVKNSHYKEHIMRSITESGGRRRQTREKR 595


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 144  KQATSSS*STSWRPGA 191
            +  TS S +TSW PG+
Sbjct: 1347 QSTTSVSTTTSWNPGS 1362


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -1

Query: 107 CEWTSWADKLKLKIISQ 57
           C+W   AD+ K K I Q
Sbjct: 517 CDWPEHADREKCKKIEQ 533


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -1

Query: 536 FKFITDVKNIFYSFIKNVYMFFFF 465
           F+F+  V NIF +F+  ++    F
Sbjct: 66  FRFVYAVYNIFGAFVMGLFCILKF 89


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/33 (24%), Positives = 17/33 (51%)
 Frame = -2

Query: 508 FFIHLLKTYTCFFFLIPS*FPSAAAYNFSLYLL 410
           F +HLL     ++F++P  F     Y +  +++
Sbjct: 123 FTVHLLFLLCIYYFVVPLFFLLCIYYFYCAFII 155


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -2

Query: 544 LISSNSLQTLKTFFIHLLKTYTCFFFL 464
           LIS   +Q + T  + LL+    FFFL
Sbjct: 67  LISGFQMQKIATKGLDLLEANRLFFFL 93


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -2

Query: 544 LISSNSLQTLKTFFIHLLKTYTCFFFL 464
           LIS   +Q + T  + LL+    FFFL
Sbjct: 67  LISGFQMQKIATKGLDLLEANRLFFFL 93


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = -1

Query: 632 LTNI*FYLLNCLITTE-PIFFAFQRLQTQKINIFKFITDVK 513
           L +I F +    IT + PI+     ++T K+N+FK I ++K
Sbjct: 378 LRDIIFAIRQHAITAKFPIYLYRMSVET-KLNVFKRIGNIK 417


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = -1

Query: 632 LTNI*FYLLNCLITTE-PIFFAFQRLQTQKINIFKFITDVK 513
           L +I F +    IT + PI+     ++T K+N+FK I ++K
Sbjct: 380 LRDIIFAIRQHAITAKFPIYLYRMSVET-KLNVFKRIGNIK 419


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = +3

Query: 570 CKKYWFCCNQT 602
           C +YW C N T
Sbjct: 112 CTRYWTCWNGT 122


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = -2

Query: 361 FVQFLAILNEDERRHRVNVVLAGDVLALINV 269
           F+Q LAI+ E E   R  V L  D     N+
Sbjct: 328 FIQLLAIVPEKEESSRQAVNLICDKFERSNI 358


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = -2

Query: 361 FVQFLAILNEDERRHRVNVVLAGDVLALINV 269
           F+Q LAI+ E E   R  V L  D     N+
Sbjct: 328 FIQLLAIVPEKEESSRQAVNLICDKFERSNI 358


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,100
Number of Sequences: 336
Number of extensions: 3073
Number of successful extensions: 22
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18114270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)