Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0234
(689 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0) 64 1e-10
SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32) 64 1e-10
SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07) 50 2e-06
SB_2655| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 5e-06
SB_2654| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 9e-05
SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0) 44 9e-05
SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27) 42 4e-04
SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0) 42 6e-04
SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0) 40 0.002
SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.006
SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06) 38 0.006
SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0) 37 0.018
SB_13486| Best HMM Match : DUF1530 (HMM E-Value=2.3) 34 0.094
SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41) 31 0.88
SB_21263| Best HMM Match : Thioredoxin (HMM E-Value=0.00093) 31 0.88
SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_6126| Best HMM Match : Thioredoxin (HMM E-Value=0.021) 31 1.2
SB_47047| Best HMM Match : DUF761 (HMM E-Value=3.2) 30 1.5
SB_43665| Best HMM Match : Thioredoxin (HMM E-Value=0.019) 29 2.7
SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33) 29 4.7
SB_33909| Best HMM Match : FH2 (HMM E-Value=0) 28 8.2
>SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0)
Length = 308
Score = 64.1 bits (149), Expect = 1e-10
Identities = 35/97 (36%), Positives = 49/97 (50%), Gaps = 1/97 (1%)
Frame = +2
Query: 89 PKMSIHIKDSDDLKT-RLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXX 265
P+ ++ + + D T L AG KLVV DF A+WCGPCK I P + +E
Sbjct: 5 PRGNVKVLELDSQFTAELTNAGTKLVVADFTASWCGPCKSIAPVYSGL-SEKYKQAVFLK 63
Query: 266 XXXXXXXXXASEYNINSMPTFVFVKNGKKLDEFSGAN 376
A++ + +MPTF F KN K+DE GA+
Sbjct: 64 IDVDVCQELAAKQGVTAMPTFQFFKNKVKVDEVRGAD 100
>SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32)
Length = 456
Score = 64.1 bits (149), Expect = 1e-10
Identities = 33/92 (35%), Positives = 43/92 (46%)
Frame = +2
Query: 101 IHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXX 280
I ++D + AG +LVVIDF ATWCGPCK I P ++ +
Sbjct: 11 IVVEDDSFFSVEIERAGSRLVVIDFTATWCGPCKSIAPVFTNLSMKF-MDVVFLKVDVDQ 69
Query: 281 XXXXASEYNINSMPTFVFVKNGKKLDEFSGAN 376
A I +MPTF F N K+DE GA+
Sbjct: 70 CQLTAESCGIRAMPTFHFYHNKAKIDELRGAD 101
>SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07)
Length = 438
Score = 50.0 bits (114), Expect = 2e-06
Identities = 18/29 (62%), Positives = 24/29 (82%)
Frame = +2
Query: 152 DKLVVIDFMATWCGPCKMIGPKLDEIAAE 238
+++ IDF ATWCGPC+MIGPK +E+A E
Sbjct: 11 NEVAAIDFTATWCGPCRMIGPKFEEMAKE 39
>SB_2655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 80
Score = 49.6 bits (113), Expect = 2e-06
Identities = 20/62 (32%), Positives = 32/62 (51%)
Frame = +2
Query: 185 WCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFVFVKNGKKLDEF 364
WC PCK++ P+LD I AE A + +N++PT + +K GK +++F
Sbjct: 2 WCNPCKVLTPRLDAIIAEQDGKVDLAKVDIDVMGELAFNFGVNAVPTVIGMKGGKVINKF 61
Query: 365 SG 370
G
Sbjct: 62 EG 63
>SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 48.4 bits (110), Expect = 5e-06
Identities = 20/44 (45%), Positives = 28/44 (63%)
Frame = +2
Query: 107 IKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAE 238
I++ + + + DKLVVIDF A WCGPC+ I PK ++A E
Sbjct: 15 IEERAEFNSVINNTKDKLVVIDFYAEWCGPCRQIKPKFKKMALE 58
>SB_2654| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 111
Score = 46.0 bits (104), Expect = 3e-05
Identities = 19/60 (31%), Positives = 30/60 (50%)
Frame = +2
Query: 179 ATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFVFVKNGKKLD 358
A WC PCK++ P+LD I AE A + +N++PT + +K GK ++
Sbjct: 46 ACWCNPCKVLTPRLDAIIAEQDGKVDLAKVDIDVMGELAFNFGVNAVPTVIGMKGGKVME 105
>SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 711
Score = 44.4 bits (100), Expect = 9e-05
Identities = 24/81 (29%), Positives = 34/81 (41%)
Frame = +2
Query: 83 YLPKMSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXX 262
YLP + + + LA + V+DF A WCGPC PK +++A +
Sbjct: 430 YLPSIVSEVNSKNFFTDVLAS--EDAWVVDFYAPWCGPCMRFAPKYEQLAKMLKGKVRAA 487
Query: 263 XXXXXXXXXXASEYNINSMPT 325
SE NI+S PT
Sbjct: 488 KVNCEQDYGLCSEANIHSYPT 508
Score = 31.9 bits (69), Expect = 0.50
Identities = 16/62 (25%), Positives = 24/62 (38%), Gaps = 1/62 (1%)
Frame = +2
Query: 167 IDFMATWCGPCKMIGPKLDEIAAE-MXXXXXXXXXXXXXXXXXASEYNINSMPTFVFVKN 343
+DF A WC PC + P+ + A + +YNI S PT + N
Sbjct: 307 VDFFAPWCPPCMRLLPEYRKAARSFVGKPVGFGTVDCTVHSQLCHQYNIRSYPTTILYNN 366
Query: 344 GK 349
+
Sbjct: 367 SQ 368
>SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 1056
Score = 44.4 bits (100), Expect = 9e-05
Identities = 28/114 (24%), Positives = 48/114 (42%), Gaps = 5/114 (4%)
Frame = +2
Query: 44 FAF*TVILFLVSIYLPKMSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLD 223
+ F V F++ +S + D D + AG +++++F A WCG CK + P+
Sbjct: 519 WTFTQVSAFVLLFVGSTLSSDVLDLGDSNFKSGVAGKDIMLVEFFAPWCGHCKRLAPEY- 577
Query: 224 EIAAEMXXXXXXXXXXXXXXXXXA-----SEYNINSMPTFVFVKNGKKLDEFSG 370
E AAE A S+Y ++ PT +NG+ ++ G
Sbjct: 578 ETAAEALKKNDPPVPLAKVDCTEAGKDTCSKYGVSGYPTLKIFRNGEMSKDYDG 631
Score = 35.5 bits (78), Expect = 0.041
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +2
Query: 155 KLVVIDFMATWCGPCKMIGPKLDEIAAEM 241
K V+I+F A WCG CK + PK +E+ ++
Sbjct: 881 KDVLIEFYAPWCGHCKSLEPKYNELGEKL 909
>SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27)
Length = 472
Score = 42.3 bits (95), Expect = 4e-04
Identities = 25/94 (26%), Positives = 37/94 (39%), Gaps = 8/94 (8%)
Frame = +2
Query: 119 DDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEM--------XXXXXXXXXXX 274
DD A K V++DF A WC CK + P ++A E+
Sbjct: 140 DDSNFEPAVQKHKFVLVDFYAPWCFHCKKMAPDYKDVAKELLILSHNSVRLAKVDCSANN 199
Query: 275 XXXXXXASEYNINSMPTFVFVKNGKKLDEFSGAN 376
+YN+ +PT +GK ++EF G N
Sbjct: 200 MATKKTCKKYNVKFLPTIYLFHDGKFVEEFEGNN 233
Score = 31.9 bits (69), Expect = 0.50
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +2
Query: 152 DKLVVIDFMATWCGPCKMIGPKLDEIAAEM 241
++ V++DF A WC C+ + P D A ++
Sbjct: 68 NEYVLVDFYAPWCSDCQRLSPLFDTAALQL 97
>SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 536
Score = 41.5 bits (93), Expect = 6e-04
Identities = 22/83 (26%), Positives = 34/83 (40%), Gaps = 1/83 (1%)
Frame = +2
Query: 137 LAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINS 316
+A DK V ++F A WCG CK + P D++ + ++S
Sbjct: 397 VARNKDKNVFVEFYAPWCGHCKQLAPIWDQLGEKYKDHADIVVAKMDSTANEVEGVKVHS 456
Query: 317 MPTF-VFVKNGKKLDEFSGANVD 382
PT F K G+ +D G +D
Sbjct: 457 FPTIKYFPKEGEAVDYNGGRTLD 479
Score = 39.5 bits (88), Expect = 0.003
Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 3/80 (3%)
Frame = +2
Query: 140 AEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEM---XXXXXXXXXXXXXXXXXASEYNI 310
A A +K V+++F A WCG CK + P+ + A ++ ++ +
Sbjct: 37 AVAANKHVLVEFYAPWCGHCKALAPEYAKAAGQLKSEKSEIKLAKVDATAETKLGEKFQV 96
Query: 311 NSMPTFVFVKNGKKLDEFSG 370
PT F K+GK E++G
Sbjct: 97 QGYPTIKFFKDGKP-SEYAG 115
>SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 362
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 4/75 (5%)
Frame = +2
Query: 158 LVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTF-VF 334
L +++F A WCG C+ + P+ + A E+ AS Y + PT VF
Sbjct: 99 LWLVEFFAPWCGHCQRLAPEWAKAATELKGKVKVGALDATVHTVTASRYQVQGYPTIKVF 158
Query: 335 ---VKNGKKLDEFSG 370
+KN ++++ G
Sbjct: 159 AAGIKNSHSVEDYQG 173
>SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 645
Score = 38.3 bits (85), Expect = 0.006
Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 3/76 (3%)
Frame = +2
Query: 152 DKLVVIDFMATWCGPCKMIGPKLDEIAAEM---XXXXXXXXXXXXXXXXXASEYNINSMP 322
+ L++++F A WCG CK + P+ ++ A E+ A +Y + P
Sbjct: 193 ESLMLVEFFAPWCGHCKQLAPEYEKAAQELQKHDPPIPLAIVDATIESELAQKYEVQGYP 252
Query: 323 TFVFVKNGKKLDEFSG 370
T + G K E+ G
Sbjct: 253 TLKVFRKG-KATEYKG 267
Score = 34.3 bits (75), Expect = 0.094
Identities = 15/54 (27%), Positives = 30/54 (55%), Gaps = 6/54 (11%)
Frame = +2
Query: 98 SIHIKDSDDLKTRLAEAGDK------LVVIDFMATWCGPCKMIGPKLDEIAAEM 241
S +K+ DD+ ++ D+ +++++F A WCG CK + P+ + A +M
Sbjct: 54 SDEVKEEDDVSVLNSKNFDRVIEENNIILVEFYAPWCGHCKSLAPEYAKAAKKM 107
>SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06)
Length = 70
Score = 38.3 bits (85), Expect = 0.006
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +2
Query: 95 MSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAE 238
+S + D D + AG +++++F A WCG CK + P+ E AAE
Sbjct: 11 LSSDVLDLGDSNFKSGVAGKDIMLVEFFAPWCGHCKRLAPEY-ETAAE 57
>SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 295
Score = 36.7 bits (81), Expect = 0.018
Identities = 18/77 (23%), Positives = 32/77 (41%), Gaps = 3/77 (3%)
Frame = +2
Query: 149 GDKLVVIDFMATWCGPCKMIGPKLDEI--AAEMXXXXXXXXXXXXXXXXXASEYNINSMP 322
G+K +++F A WCG CK + P +++ A S +++ P
Sbjct: 38 GEKFALVEFYAPWCGHCKQLAPTYEQLGEAYTQSSDVIIAKVDADGDRDLGSRFDVKGFP 97
Query: 323 TF-VFVKNGKKLDEFSG 370
T F K +E++G
Sbjct: 98 TIKYFPKGSTTPEEYNG 114
>SB_13486| Best HMM Match : DUF1530 (HMM E-Value=2.3)
Length = 222
Score = 34.3 bits (75), Expect = 0.094
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +2
Query: 137 LAEAGDKLVVIDFMATWCGPCKMIGP 214
L E+ K+ +IDF A+WC PC++ P
Sbjct: 172 LKESMGKVTIIDFWASWCQPCRVENP 197
>SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41)
Length = 271
Score = 31.1 bits (67), Expect = 0.88
Identities = 19/75 (25%), Positives = 28/75 (37%), Gaps = 2/75 (2%)
Frame = +2
Query: 161 VVIDFMATWCGPCKMIGPKLDEIAAEM--XXXXXXXXXXXXXXXXXASEYNINSMPTFVF 334
V++ F A WCG CK PK ++ A + +N PT +
Sbjct: 167 VLVMFYAPWCGHCKNAKPKYEKAAETFKDQPNRVFAKLDCTKFGDVCDKEEVNGYPTLRY 226
Query: 335 VKNGKKLDEFSGANV 379
GK + E+ G V
Sbjct: 227 YLYGKFVVEYDGDRV 241
>SB_21263| Best HMM Match : Thioredoxin (HMM E-Value=0.00093)
Length = 148
Score = 31.1 bits (67), Expect = 0.88
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 4/42 (9%)
Frame = +2
Query: 128 KTRLAEAGD----KLVVIDFMATWCGPCKMIGPKLDEIAAEM 241
K L +AG+ K++ + F A WC PC+ P L + E+
Sbjct: 13 KGELVDAGEAVKGKVIAVYFSAHWCPPCRQFTPILKDFYEEL 54
>SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 488
Score = 30.7 bits (66), Expect = 1.2
Identities = 9/29 (31%), Positives = 19/29 (65%)
Frame = +2
Query: 155 KLVVIDFMATWCGPCKMIGPKLDEIAAEM 241
+++++DF A WC C + PK ++ A ++
Sbjct: 40 EVMLVDFYAPWCSDCDNLRPKYEKAARDL 68
>SB_6126| Best HMM Match : Thioredoxin (HMM E-Value=0.021)
Length = 293
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 152 DKLVVIDFMATWCGPCKMIGPKLDEIAAE 238
+K+V I F A+WC PC+ P L + E
Sbjct: 154 NKVVAIYFSASWCPPCQKFTPLLKDFYEE 182
>SB_47047| Best HMM Match : DUF761 (HMM E-Value=3.2)
Length = 389
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = -3
Query: 234 AAISSSLGPIILHGPHQVAMKSITTSLSPASASLVFRSSESL 109
+A SS + P++ H H V+ + ++ P S++ S E L
Sbjct: 338 SAQSSPINPVVYHDNHDVSTSGVKSATCPVCESVIHGSGEEL 379
>SB_43665| Best HMM Match : Thioredoxin (HMM E-Value=0.019)
Length = 415
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 155 KLVVIDFMATWCGPCKMIGPKLDE 226
K+V + F A WC PC+ PKL E
Sbjct: 30 KIVGLYFSAHWCPPCRGFTPKLVE 53
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 3/28 (10%)
Frame = +2
Query: 146 AGD---KLVVIDFMATWCGPCKMIGPKL 220
AGD K+V I F A WC PC+ P+L
Sbjct: 168 AGDLKGKIVGIYFSAHWCPPCRAFTPEL 195
>SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 564
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/79 (21%), Positives = 31/79 (39%), Gaps = 4/79 (5%)
Frame = +2
Query: 158 LVVIDFMATWCGPCKMIGPKLD----EIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPT 325
++++DF A WC C+ + P+L+ +AA+ + I P+
Sbjct: 39 IMLVDFYAPWCHHCQELLPQLEGAANALAAKGLFQFAKVDCTDPRSKVLCDNFKIEGYPS 98
Query: 326 FVFVKNGKKLDEFSGANVD 382
K GK ++ G D
Sbjct: 99 VKLFKFGKYAGDYIGQRTD 117
>SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33)
Length = 386
Score = 28.7 bits (61), Expect = 4.7
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +2
Query: 155 KLVVIDFMATWCGPCKMIGPKL 220
K V++ F A WCG CK P+L
Sbjct: 213 KHVLVMFYAPWCGHCKKAKPEL 234
Score = 28.3 bits (60), Expect = 6.2
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +2
Query: 89 PKMSIHIKDS--DDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIA 232
P +H++D DD + + V++ F A WCG CK + P+ + A
Sbjct: 81 PSEVVHLRDDMFDDFVAK-----NPSVLVMFYAPWCGHCKAMKPEYVDAA 125
>SB_33909| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1063
Score = 27.9 bits (59), Expect = 8.2
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -2
Query: 556 KHKKLISSNSLQTLKTFFIHLLKT 485
K KL+SSNS+ LK +HLL++
Sbjct: 810 KEGKLVSSNSMSKLKQKVVHLLES 833
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,553,756
Number of Sequences: 59808
Number of extensions: 338425
Number of successful extensions: 874
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 826
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 870
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1793485733
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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