Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0233
(344 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9U762 Cluster: 40S ribosomal protein S6; n=10; Culicim... 184 5e-46
UniRef50_P62753 Cluster: 40S ribosomal protein S6; n=203; Eukary... 179 1e-44
UniRef50_A7SGC3 Cluster: Predicted protein; n=5; Eumetazoa|Rep: ... 173 5e-43
UniRef50_P29327-2 Cluster: Isoform B of P29327 ; n=3; Drosophila... 165 2e-40
UniRef50_A0CU37 Cluster: Chromosome undetermined scaffold_28, wh... 148 3e-35
UniRef50_A4VD76 Cluster: Putative uncharacterized protein; n=1; ... 144 3e-34
UniRef50_A5K858 Cluster: 40S ribosomal protein S6, putative; n=5... 132 2e-30
UniRef50_A2EFM7 Cluster: Ribosomal protein S6e, putative; n=2; T... 126 1e-28
UniRef50_O15598 Cluster: Ribosomal protein S6; n=6; Entamoeba hi... 123 7e-28
UniRef50_UPI00005A146E Cluster: PREDICTED: similar to 40S riboso... 123 9e-28
UniRef50_Q7QSH4 Cluster: GLP_64_20707_19961; n=1; Giardia lambli... 102 2e-21
UniRef50_Q98SA3 Cluster: 40S ribosomal protein S6; n=1; Guillard... 99 2e-20
UniRef50_Q9NE83 Cluster: 40S ribosomal protein S6; n=9; Trypanos... 93 1e-18
UniRef50_Q8SRY0 Cluster: 40S ribosomal protein S6; n=1; Encephal... 84 5e-16
UniRef50_A2A3R7 Cluster: Ribosomal protein S6; n=1; Homo sapiens... 80 1e-14
UniRef50_Q8U3H8 Cluster: 30S ribosomal protein S6e; n=4; Archaea... 62 3e-09
UniRef50_A0DEZ7 Cluster: Chromosome undetermined scaffold_48, wh... 60 1e-08
UniRef50_Q5JDK8 Cluster: 30S ribosomal protein S6e; n=1; Thermoc... 59 2e-08
UniRef50_UPI00015BAF12 Cluster: SSU ribosomal protein S6E; n=1; ... 58 5e-08
UniRef50_Q2NGM7 Cluster: 30S ribosomal protein S6e; n=2; Methano... 55 4e-07
UniRef50_Q9HMJ5 Cluster: 30S ribosomal protein S6e; n=6; Halobac... 53 1e-06
UniRef50_O29739 Cluster: 30S ribosomal protein S6e; n=7; Euryarc... 53 2e-06
UniRef50_A7IAP8 Cluster: Ribosomal protein S6e; n=2; Candidatus ... 50 1e-05
UniRef50_Q3LVW0 Cluster: Ribosomal protein S6; n=1; Bigelowiella... 48 3e-05
UniRef50_Q980A6 Cluster: 30S ribosomal protein S6e; n=5; Sulfolo... 48 4e-05
UniRef50_A2BJZ7 Cluster: 30S ribosomal protein S6e; n=2; Desulfu... 47 1e-04
UniRef50_Q6LXY7 Cluster: 30S ribosomal protein S6e; n=4; Archaea... 46 2e-04
UniRef50_Q9Y9B6 Cluster: 30S ribosomal protein S6e; n=1; Aeropyr... 45 3e-04
UniRef50_UPI0000DC1AEC Cluster: UPI0000DC1AEC related cluster; n... 43 0.001
UniRef50_A0RYX5 Cluster: Ribosomal protein S6E; n=1; Cenarchaeum... 43 0.002
UniRef50_Q01CM6 Cluster: Chromosome 03 contig 1, DNA sequence; n... 42 0.002
UniRef50_Q74MJ5 Cluster: 30S ribosomal protein S6e; n=1; Nanoarc... 40 0.015
UniRef50_Q8PU79 Cluster: 30S ribosomal protein S6e; n=8; Euryarc... 38 0.035
UniRef50_A7DQN0 Cluster: Ribosomal protein S6e; n=1; Candidatus ... 38 0.046
UniRef50_Q978W7 Cluster: 30S ribosomal protein S6e; n=5; Thermop... 36 0.24
UniRef50_Q87BM0 Cluster: Putative uncharacterized protein; n=1; ... 35 0.32
UniRef50_O86476 Cluster: Clumping factor B precursor; n=31; Stap... 34 0.75
UniRef50_Q6N427 Cluster: Phytoene dehydrogenase-related protein;... 33 1.3
UniRef50_UPI0001552B57 Cluster: PREDICTED: hypothetical protein;... 32 2.3
UniRef50_Q7VKW9 Cluster: Possible uroporphyrinogen III synthase;... 32 2.3
UniRef50_A1SN07 Cluster: ATP-dependent helicase HrpA; n=4; Actin... 32 2.3
UniRef50_Q22SD8 Cluster: Putative uncharacterized protein; n=1; ... 32 2.3
UniRef50_Q8TRJ6 Cluster: Glycosyltransferase; n=1; Methanosarcin... 32 2.3
UniRef50_UPI00015564F7 Cluster: PREDICTED: similar to likely ort... 32 3.0
UniRef50_A6QZZ0 Cluster: Predicted protein; n=1; Ajellomyces cap... 32 3.0
UniRef50_A1FV38 Cluster: Transcriptional regulator, MarR family ... 31 4.0
UniRef50_Q2Y911 Cluster: Putative uncharacterized protein; n=2; ... 31 5.3
UniRef50_A7SIY4 Cluster: Predicted protein; n=1; Nematostella ve... 31 5.3
UniRef50_Q9WU42 Cluster: Nuclear receptor corepressor 2; n=15; A... 31 5.3
UniRef50_UPI000155618C Cluster: PREDICTED: similar to poliovirus... 31 6.9
UniRef50_UPI0000DA429C Cluster: PREDICTED: hypothetical protein;... 31 6.9
UniRef50_UPI0000D9BCD7 Cluster: PREDICTED: hypothetical protein;... 31 6.9
UniRef50_Q60BZ5 Cluster: Selenium-binding family protein; n=4; P... 31 6.9
UniRef50_Q5KUB4 Cluster: Phosphate ABC transporter; n=1; Geobaci... 31 6.9
UniRef50_Q3KE39 Cluster: Helix-turn-helix, AraC type; n=1; Pseud... 31 6.9
UniRef50_A1VF88 Cluster: NLP/P60 protein precursor; n=2; Desulfo... 31 6.9
UniRef50_Q855K7 Cluster: Gp3; n=4; unclassified Siphoviridae|Rep... 31 6.9
UniRef50_Q586S2 Cluster: Putative uncharacterized protein; n=1; ... 31 6.9
UniRef50_Q17G68 Cluster: Formin 1,2/cappuccino; n=2; Culicidae|R... 31 6.9
UniRef50_Q1EY35 Cluster: Major facilitator superfamily MFS_1 pre... 30 9.2
UniRef50_A1ZBA1 Cluster: CG30115-PD, isoform D; n=4; Sophophora|... 30 9.2
UniRef50_Q2H5M1 Cluster: Putative uncharacterized protein; n=1; ... 30 9.2
>UniRef50_Q9U762 Cluster: 40S ribosomal protein S6; n=10;
Culicimorpha|Rep: 40S ribosomal protein S6 - Aedes
albopictus (Forest day mosquito)
Length = 349
Score = 184 bits (447), Expect = 5e-46
Identities = 81/98 (82%), Positives = 90/98 (91%)
Frame = +2
Query: 50 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 229
MKLNVS+PATG QK FEV+D+HKLR FY+KRMGAE+ AD LGDEWKGYV ++AGGNDKQG
Sbjct: 1 MKLNVSFPATGAQKTFEVMDDHKLRHFYDKRMGAEITADHLGDEWKGYVFKIAGGNDKQG 60
Query: 230 FPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVR 343
FPMKQGVLTN+RVRLL+ KGHSCYRPRR GERKRKSVR
Sbjct: 61 FPMKQGVLTNTRVRLLLKKGHSCYRPRRTGERKRKSVR 98
>UniRef50_P62753 Cluster: 40S ribosomal protein S6; n=203;
Eukaryota|Rep: 40S ribosomal protein S6 - Homo sapiens
(Human)
Length = 249
Score = 179 bits (435), Expect = 1e-44
Identities = 80/98 (81%), Positives = 88/98 (89%)
Frame = +2
Query: 50 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 229
MKLN+S+PATGCQKL EV DE KLR FYEKRM EV AD LG+EWKGYV+R++GGNDKQG
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60
Query: 230 FPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVR 343
FPMKQGVLT+ RVRLL+SKGHSCYRPRR GERKRKSVR
Sbjct: 61 FPMKQGVLTHGRVRLLLSKGHSCYRPRRTGERKRKSVR 98
>UniRef50_A7SGC3 Cluster: Predicted protein; n=5; Eumetazoa|Rep:
Predicted protein - Nematostella vectensis
Length = 245
Score = 173 bits (422), Expect = 5e-43
Identities = 75/98 (76%), Positives = 84/98 (85%)
Frame = +2
Query: 50 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 229
MKLN+SYP TGCQKL E+ DE K+R FY+KRM EV + LGDEWKGYV R+ GGNDKQG
Sbjct: 1 MKLNISYPVTGCQKLIEIEDERKVRSFYDKRMAMEVSGECLGDEWKGYVFRITGGNDKQG 60
Query: 230 FPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVR 343
FPMKQG++TN RVRLL+SKGHSCYRPRR GERKRKSVR
Sbjct: 61 FPMKQGIMTNGRVRLLLSKGHSCYRPRRTGERKRKSVR 98
>UniRef50_P29327-2 Cluster: Isoform B of P29327 ; n=3; Drosophila
melanogaster|Rep: Isoform B of P29327 - Drosophila
melanogaster (Fruit fly)
Length = 200
Score = 165 bits (400), Expect = 2e-40
Identities = 78/98 (79%), Positives = 85/98 (86%)
Frame = +2
Query: 50 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 229
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG VEAD LGDEWKGY LR+AGGNDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 230 FPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVR 343
FPMKQGVLT+ R+RLL K HSC+ PR + RK K+VR
Sbjct: 61 FPMKQGVLTHGRLRLL-KKIHSCFHPRCNKVRKCKTVR 97
>UniRef50_A0CU37 Cluster: Chromosome undetermined scaffold_28, whole
genome shotgun sequence; n=6; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_28,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 315
Score = 148 bits (358), Expect = 3e-35
Identities = 65/98 (66%), Positives = 78/98 (79%)
Frame = +2
Query: 50 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 229
MK N+SYP TG QK E+ D+ K IF++KRMG VEAD LG+E+KGYVL++ GGNDKQG
Sbjct: 1 MKFNISYPLTGAQKTVEIDDDKKCSIFFDKRMGQVVEADNLGEEYKGYVLKITGGNDKQG 60
Query: 230 FPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVR 343
FPM+QGVL RVR+LM KGH YRPR+DGE KRKS+R
Sbjct: 61 FPMRQGVLFKGRVRILMRKGHKGYRPRKDGEMKRKSIR 98
>UniRef50_A4VD76 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 293
Score = 144 bits (350), Expect = 3e-34
Identities = 64/98 (65%), Positives = 76/98 (77%)
Frame = +2
Query: 50 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 229
MK N+SYP TG QK E+ D+ K IF +K+MG EVE D LGDE+KGYV ++AGGNDK G
Sbjct: 1 MKFNISYPLTGAQKCIEIDDDKKCNIFMDKKMGQEVEGDTLGDEFKGYVFKIAGGNDKDG 60
Query: 230 FPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVR 343
FPMKQGV+ RVRLL+S+GHSC+ RR G RKRKSVR
Sbjct: 61 FPMKQGVMVRGRVRLLLSEGHSCFTSRRSGFRKRKSVR 98
>UniRef50_A5K858 Cluster: 40S ribosomal protein S6, putative; n=5;
Plasmodium|Rep: 40S ribosomal protein S6, putative -
Plasmodium vivax
Length = 391
Score = 132 bits (319), Expect = 2e-30
Identities = 61/98 (62%), Positives = 72/98 (73%)
Frame = +2
Query: 50 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 229
MKLN+S P QK E+ DE KL F EKR+G V D +G+E+ GYV R+ GGNDKQG
Sbjct: 42 MKLNISNPLNNVQKSIEIDDEKKLLPFMEKRIGNVVPGDSIGEEFLGYVFRITGGNDKQG 101
Query: 230 FPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVR 343
FPM QGVLTN+RVRLL KG CYRPR+ GE++RKSVR
Sbjct: 102 FPMMQGVLTNNRVRLLFKKGMKCYRPRKKGEKRRKSVR 139
>UniRef50_A2EFM7 Cluster: Ribosomal protein S6e, putative; n=2;
Trichomonas vaginalis G3|Rep: Ribosomal protein S6e,
putative - Trichomonas vaginalis G3
Length = 216
Score = 126 bits (304), Expect = 1e-28
Identities = 53/98 (54%), Positives = 74/98 (75%)
Frame = +2
Query: 50 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 229
M++ ++YP G Q + ++ D L YEKR+G ++E ++LG ++KGY+ R+ GG DKQG
Sbjct: 1 MRITLAYPENGTQVVVDIDDPAALNALYEKRVGQDIEGEKLGGQFKGYLFRIGGGFDKQG 60
Query: 230 FPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVR 343
FPMKQGV+T R+RLL+ G SCYRPR+DGERKRK+VR
Sbjct: 61 FPMKQGVITPRRIRLLLKTGASCYRPRKDGERKRKTVR 98
>UniRef50_O15598 Cluster: Ribosomal protein S6; n=6; Entamoeba
histolytica|Rep: Ribosomal protein S6 - Entamoeba
histolytica
Length = 162
Score = 123 bits (297), Expect = 7e-28
Identities = 55/97 (56%), Positives = 73/97 (75%)
Frame = +2
Query: 53 KLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGF 232
K+NV+YPATG K F+ +E R F +KR+G EV+A LGDE+KGY+L++ GG DK GF
Sbjct: 1 KINVAYPATGRIKKFDFEEEKNYRPFLDKRIGQEVDASSLGDEFKGYILKITGGCDKDGF 60
Query: 233 PMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVR 343
PM GV TN+RVRLL+ + CY+P R+GER+RK+VR
Sbjct: 61 PMMTGVATNNRVRLLLDGRNGCYKPLRNGERRRKTVR 97
>UniRef50_UPI00005A146E Cluster: PREDICTED: similar to 40S ribosomal
protein S6; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S6 - Canis familiaris
Length = 154
Score = 123 bits (296), Expect = 9e-28
Identities = 53/77 (68%), Positives = 64/77 (83%)
Frame = +2
Query: 50 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 229
MKLN+S+PATGCQKL E DE K R FYEK M +EV AD LG+EWKGY++R++GGNDKQG
Sbjct: 1 MKLNISFPATGCQKLIEADDERKPRTFYEKHMASEVAADALGEEWKGYMVRISGGNDKQG 60
Query: 230 FPMKQGVLTNSRVRLLM 280
FPMKQ VLT+ R+ LL+
Sbjct: 61 FPMKQDVLTHDRIHLLL 77
>UniRef50_Q7QSH4 Cluster: GLP_64_20707_19961; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_64_20707_19961 - Giardia lamblia
ATCC 50803
Length = 248
Score = 102 bits (244), Expect = 2e-21
Identities = 47/97 (48%), Positives = 62/97 (63%)
Frame = +2
Query: 53 KLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGF 232
K+N+S P TG K + D K + + RM +E + LG+E+ G R+ GGND QGF
Sbjct: 8 KVNISNPVTGANKSLMIEDFRKSQTIHGLRMASEFDGAALGEEYAGCTFRITGGNDAQGF 67
Query: 233 PMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVR 343
PM QGVL + R RLL+ +G CY RR+GERKRKS+R
Sbjct: 68 PMYQGVLKSQRARLLLRQGAKCYLHRRNGERKRKSIR 104
>UniRef50_Q98SA3 Cluster: 40S ribosomal protein S6; n=1; Guillardia
theta|Rep: 40S ribosomal protein S6 - Guillardia theta
(Cryptomonas phi)
Length = 209
Score = 98.7 bits (235), Expect = 2e-20
Identities = 46/100 (46%), Positives = 67/100 (67%), Gaps = 2/100 (2%)
Frame = +2
Query: 50 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 229
MK N++ P+TG Q E+ DE KLRI Y K++ ++++ +G EW + + GG DKQG
Sbjct: 1 MKFNIANPSTGVQHTIEIDDEDKLRILYGKKLTSKIDGKIIGKEWDKSIFIITGGQDKQG 60
Query: 230 FPMKQGVLTNSRVRLLMSKGHSCYR--PRRDGERKRKSVR 343
FPMK+G+L+ SRV++L+ KG + R + GER RKSVR
Sbjct: 61 FPMKEGILSPSRVKILLKKGSTGCRGYKMKKGERCRKSVR 100
>UniRef50_Q9NE83 Cluster: 40S ribosomal protein S6; n=9;
Trypanosomatidae|Rep: 40S ribosomal protein S6 -
Leishmania major
Length = 249
Score = 93.1 bits (221), Expect = 1e-18
Identities = 48/101 (47%), Positives = 65/101 (64%), Gaps = 3/101 (2%)
Frame = +2
Query: 50 MKLNVSYPATGCQKLFEVVDEHKLRI-FYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQ 226
MKLN++YP G K FE+ DE R+ + R+G EV+ G E+KGY+ R+ GG+DK
Sbjct: 1 MKLNIAYPRNGTVKQFEISDEVLRRVQLQDYRLGNEVDGAIFGSEFKGYIFRLRGGSDKD 60
Query: 227 GFPMKQGVLTNSRVRLLMSKGHSCYRPRR--DGERKRKSVR 343
GFPM GVL +SRV LL+ +G + R GER+RK+VR
Sbjct: 61 GFPMVPGVLASSRVSLLVKRGAIGFNTFRGYQGERRRKNVR 101
>UniRef50_Q8SRY0 Cluster: 40S ribosomal protein S6; n=1;
Encephalitozoon cuniculi|Rep: 40S ribosomal protein S6 -
Encephalitozoon cuniculi
Length = 203
Score = 84.2 bits (199), Expect = 5e-16
Identities = 39/84 (46%), Positives = 60/84 (71%)
Frame = +2
Query: 92 LFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVR 271
+FE+ +++R+ Y+K++G + + LG+E++G ++ + GG+D QGFPM G LT RVR
Sbjct: 1 MFEIERRNEVRL-YDKKIGDQFDGGILGEEFEGTIMEITGGDDYQGFPMVSGHLTKKRVR 59
Query: 272 LLMSKGHSCYRPRRDGERKRKSVR 343
L+SKG + YR RR G R+RKSVR
Sbjct: 60 PLLSKGDAGYRCRRKGVRRRKSVR 83
>UniRef50_A2A3R7 Cluster: Ribosomal protein S6; n=1; Homo
sapiens|Rep: Ribosomal protein S6 - Homo sapiens (Human)
Length = 91
Score = 79.8 bits (188), Expect = 1e-14
Identities = 35/46 (76%), Positives = 38/46 (82%)
Frame = +2
Query: 50 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWK 187
MKLN+S+PATGCQKL EV DE KLR FYEKRM EV AD LG+EWK
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWK 46
>UniRef50_Q8U3H8 Cluster: 30S ribosomal protein S6e; n=4;
Archaea|Rep: 30S ribosomal protein S6e - Pyrococcus
furiosus
Length = 125
Score = 61.7 bits (143), Expect = 3e-09
Identities = 40/109 (36%), Positives = 60/109 (55%), Gaps = 9/109 (8%)
Frame = +2
Query: 44 AVMKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQL--------GDEWKGYV- 196
A KL +S P +G K E+ ++ KR+G ++ A +L G E+ V
Sbjct: 2 ATFKLVISDPKSGIAKQVEITGAETEKLI-GKRIGDQIPAKELNINLNELFGKEFPEDVK 60
Query: 197 LRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVR 343
L + GG DK GFPM+ + RVR+L+SKG +RP+ GER++K+VR
Sbjct: 61 LEIRGGTDKDGFPMRPDIHGPRRVRVLLSKGPG-FRPKEKGERRKKTVR 108
>UniRef50_A0DEZ7 Cluster: Chromosome undetermined scaffold_48, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_48,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 304
Score = 59.7 bits (138), Expect = 1e-08
Identities = 30/48 (62%), Positives = 33/48 (68%)
Frame = +2
Query: 200 RVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVR 343
R GGNDKQG VL RVR+LM KGH YRPR+DGE KRKS+R
Sbjct: 62 RFTGGNDKQG------VLFKGRVRILMRKGHKGYRPRKDGEMKRKSIR 103
>UniRef50_Q5JDK8 Cluster: 30S ribosomal protein S6e; n=1;
Thermococcus kodakarensis KOD1|Rep: 30S ribosomal
protein S6e - Pyrococcus kodakaraensis (Thermococcus
kodakaraensis)
Length = 125
Score = 58.8 bits (136), Expect = 2e-08
Identities = 39/108 (36%), Positives = 58/108 (53%), Gaps = 9/108 (8%)
Frame = +2
Query: 44 AVMKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLG---DEWKGYV------ 196
A KL +S P G K E+ ++ +R+G E+ A +LG E G
Sbjct: 2 ATFKLVISNPKNGVAKQVEISGPEADKLI-GRRIGEEIPASELGLNLSEIFGEEIPADAK 60
Query: 197 LRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSV 340
L++ GG DK GFPM+ V RV++L+S+G +RPR GER++K+V
Sbjct: 61 LKITGGTDKDGFPMRPDVHGPRRVKILLSRGPG-FRPRERGERRKKTV 107
>UniRef50_UPI00015BAF12 Cluster: SSU ribosomal protein S6E; n=1;
Ignicoccus hospitalis KIN4/I|Rep: SSU ribosomal protein
S6E - Ignicoccus hospitalis KIN4/I
Length = 236
Score = 57.6 bits (133), Expect = 5e-08
Identities = 35/87 (40%), Positives = 50/87 (57%), Gaps = 2/87 (2%)
Frame = +2
Query: 89 KLFEV-VDEHKLRIFYEKRMGAEVEADQLGDEW-KGYVLRVAGGNDKQGFPMKQGVLTNS 262
K F++ ++ R F KR+G V A LG E KG L + GG+D+ GFPM+ +
Sbjct: 133 KAFQITIEGENARKFIGKRIGETVPASILGIETLKGLQLEIRGGSDESGFPMRPDIPGPV 192
Query: 263 RVRLLMSKGHSCYRPRRDGERKRKSVR 343
+ R L+S G + PR GER+RK+VR
Sbjct: 193 KKRALLS-GPPGFWPREKGERRRKTVR 218
>UniRef50_Q2NGM7 Cluster: 30S ribosomal protein S6e; n=2;
Methanobacteriaceae|Rep: 30S ribosomal protein S6e -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 130
Score = 54.8 bits (126), Expect = 4e-07
Identities = 29/68 (42%), Positives = 43/68 (63%)
Frame = +2
Query: 140 RMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDG 319
++G E LG KGY LR+ GG+DK GFPMK+ V R + L++ G + ++P + G
Sbjct: 30 KIGEEFNGGVLG--LKGYKLRITGGSDKNGFPMKEDVDGTRRFKSLVN-GGTGFKPTKKG 86
Query: 320 ERKRKSVR 343
R+RK+VR
Sbjct: 87 LRRRKTVR 94
>UniRef50_Q9HMJ5 Cluster: 30S ribosomal protein S6e; n=6;
Halobacteriaceae|Rep: 30S ribosomal protein S6e -
Halobacterium salinarium (Halobacterium halobium)
Length = 131
Score = 53.2 bits (122), Expect = 1e-06
Identities = 33/100 (33%), Positives = 55/100 (55%)
Frame = +2
Query: 44 AVMKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDK 223
A ++ V+ P +G FEV D F + +GA V+ +G + GY + + GG+D
Sbjct: 2 ATFQVAVADPESGRTYQFEV-DGQDANRFIGREIGAAVDGGAVGLD--GYTVEITGGSDD 58
Query: 224 QGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVR 343
G PM++ V + + +L+ +G + + P DGERKR +VR
Sbjct: 59 AGRPMREDVDGSDLMEVLL-EGGAGFNPDEDGERKRVTVR 97
>UniRef50_O29739 Cluster: 30S ribosomal protein S6e; n=7;
Euryarchaeota|Rep: 30S ribosomal protein S6e -
Archaeoglobus fulgidus
Length = 129
Score = 52.8 bits (121), Expect = 2e-06
Identities = 36/96 (37%), Positives = 55/96 (57%), Gaps = 2/96 (2%)
Frame = +2
Query: 62 VSYPATG--CQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFP 235
+S P TG QK+ E + ++L K++G +V + + D Y L++ GG D+ GFP
Sbjct: 7 ISDPKTGRAYQKVVEGANANRL---IGKQIG-DVISGTIVDLPPDYELKITGGTDRDGFP 62
Query: 236 MKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVR 343
M+ + +R RLL+S G +RP+ G RKRK VR
Sbjct: 63 MRPDLPGTARRRLLLSGGVG-FRPKEKGLRKRKGVR 97
>UniRef50_A7IAP8 Cluster: Ribosomal protein S6e; n=2; Candidatus
Methanoregula boonei 6A8|Rep: Ribosomal protein S6e -
Methanoregula boonei (strain 6A8)
Length = 143
Score = 49.6 bits (113), Expect = 1e-05
Identities = 26/69 (37%), Positives = 43/69 (62%)
Frame = +2
Query: 137 KRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRD 316
K++G EV+A LG GY + + GG+D+ G P ++ + R +LL+++G + P +
Sbjct: 32 KKIGDEVDAGPLG--LAGYKILITGGSDQTGTPARKSLPGAGRRKLLLAEGVG-FHPVME 88
Query: 317 GERKRKSVR 343
GERKRK +R
Sbjct: 89 GERKRKMIR 97
>UniRef50_Q3LVW0 Cluster: Ribosomal protein S6; n=1; Bigelowiella
natans|Rep: Ribosomal protein S6 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 239
Score = 48.4 bits (110), Expect = 3e-05
Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 2/100 (2%)
Frame = +2
Query: 50 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 229
MK+N++ P G Q + DE I K +G +E LG+++ + GG+DKQG
Sbjct: 1 MKINIADPILGTQYSIKRDDEFIEHIIGRK-IGDTIEGSILGEDFSRNEFLINGGHDKQG 59
Query: 230 FPMKQGVLTNSRVRLLMSKGHSCYRP--RRDGERKRKSVR 343
F +K+ + T R+++ + KG R +R K+++VR
Sbjct: 60 FLLKKNLNTFERLKINVKKGSLGNRSHFKRKNLTKKRTVR 99
>UniRef50_Q980A6 Cluster: 30S ribosomal protein S6e; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S6e -
Sulfolobus solfataricus
Length = 214
Score = 48.0 bits (109), Expect = 4e-05
Identities = 29/81 (35%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Frame = +2
Query: 104 VDEHKLRIFYEKRMGAEVEADQL-GDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLM 280
VD++K ++G EA+QL G K L++ GG+D GFPM+ V+ ++ ++L+
Sbjct: 121 VDQNKATNLVGLKIGDVFEANQLIGLPVK---LKITGGSDNSGFPMRFDVIGAAKRKILL 177
Query: 281 SKGHSCYRPRRDGERKRKSVR 343
S G + P +GER+RK++R
Sbjct: 178 S-GPPGFYPNENGERRRKTIR 197
>UniRef50_A2BJZ7 Cluster: 30S ribosomal protein S6e; n=2;
Desulfurococcales|Rep: 30S ribosomal protein S6e -
Hyperthermus butylicus (strain DSM 5456 / JCM 9403)
Length = 217
Score = 46.8 bits (106), Expect = 1e-04
Identities = 23/52 (44%), Positives = 32/52 (61%)
Frame = +2
Query: 188 GYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVR 343
GY L + GG+D GFPM + + R+L+S G + PR GER+RK+VR
Sbjct: 146 GYKLLIRGGSDNSGFPMLPSIPGPVKKRVLLS-GPPGFHPREKGERRRKTVR 196
>UniRef50_Q6LXY7 Cluster: 30S ribosomal protein S6e; n=4;
Archaea|Rep: 30S ribosomal protein S6e - Methanococcus
maripaludis
Length = 124
Score = 46.0 bits (104), Expect = 2e-04
Identities = 23/69 (33%), Positives = 42/69 (60%)
Frame = +2
Query: 137 KRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRD 316
K++G E+ + E +GY L++ GG+D+ GF M+ + ++R+L+ +G Y +
Sbjct: 28 KKIGDEISGSIV--ELEGYKLKITGGSDRCGFAMRHDIHGAMKMRVLLKEGPG-YNVKEK 84
Query: 317 GERKRKSVR 343
G R+RKS+R
Sbjct: 85 GLRRRKSLR 93
>UniRef50_Q9Y9B6 Cluster: 30S ribosomal protein S6e; n=1; Aeropyrum
pernix|Rep: 30S ribosomal protein S6e - Aeropyrum pernix
Length = 235
Score = 45.2 bits (102), Expect = 3e-04
Identities = 22/52 (42%), Positives = 31/52 (59%)
Frame = +2
Query: 188 GYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVR 343
G ++ GG D G PM GV + R ++L++ G + PR GER+RKSVR
Sbjct: 155 GLKFKIRGGTDATGIPMHPGVPGSGRYKVLLA-GPPGFHPRERGERRRKSVR 205
>UniRef50_UPI0000DC1AEC Cluster: UPI0000DC1AEC related cluster; n=2;
Rattus norvegicus|Rep: UPI0000DC1AEC UniRef100 entry -
Rattus norvegicus
Length = 227
Score = 43.2 bits (97), Expect = 0.001
Identities = 36/98 (36%), Positives = 49/98 (50%), Gaps = 1/98 (1%)
Frame = +2
Query: 53 KLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGF 232
KLN+S+ Q L EV + KLR FYEK M E+ + +E N + F
Sbjct: 2 KLNISFLLIVYQILTEVDGKCKLRAFYEKCMTTEITVNFSCEE-----------NADKIF 50
Query: 233 PMKQGVLTNSRVRLLMSKGHS-CYRPRRDGERKRKSVR 343
MKQ VL + RV LL++ HS Y+P R E S++
Sbjct: 51 SMKQEVLIHFRVHLLLNNLHSYIYKPLRTREMNYTSLQ 88
>UniRef50_A0RYX5 Cluster: Ribosomal protein S6E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein S6E - Cenarchaeum
symbiosum
Length = 133
Score = 42.7 bits (96), Expect = 0.002
Identities = 27/67 (40%), Positives = 38/67 (56%)
Frame = +2
Query: 143 MGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGE 322
+G+E +A LG E K +R+ GG+DK G PM+ V +R +L+S+G R G
Sbjct: 39 IGSEADATALGLEGK---IRITGGSDKSGVPMRPDVHGPARKYVLLSRGVG-LRDAERGG 94
Query: 323 RKRKSVR 343
R RK VR
Sbjct: 95 RTRKLVR 101
>UniRef50_Q01CM6 Cluster: Chromosome 03 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 03 contig 1, DNA
sequence - Ostreococcus tauri
Length = 211
Score = 42.3 bits (95), Expect = 0.002
Identities = 22/53 (41%), Positives = 34/53 (64%)
Frame = -2
Query: 334 FTFSLSIAARSVT*VAL*HQKTNTAVCQDALFHRESLLVVAASDTKYIALPFI 176
FT + ++AA + AL H++ +T V Q AL H E+LLVV D + ++LPF+
Sbjct: 161 FTLASAVAAEAAR--ALGHEQEHTLVRQHALLHAEALLVVTTHDLEDVSLPFL 211
>UniRef50_Q74MJ5 Cluster: 30S ribosomal protein S6e; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S6e -
Nanoarchaeum equitans
Length = 126
Score = 39.5 bits (88), Expect = 0.015
Identities = 23/69 (33%), Positives = 40/69 (57%)
Frame = +2
Query: 44 AVMKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDK 223
+V+K+ VS P +G E + L Y K++G ++ ++G + GY L++ GG+D
Sbjct: 5 SVVKIVVSDPKSGKAIQIETKEPQWL---YGKKIGDTIDGSKIGLD--GYELKITGGSDI 59
Query: 224 QGFPMKQGV 250
GFPM++ V
Sbjct: 60 AGFPMRKEV 68
>UniRef50_Q8PU79 Cluster: 30S ribosomal protein S6e; n=8;
Euryarchaeota|Rep: 30S ribosomal protein S6e -
Methanosarcina mazei (Methanosarcina frisia)
Length = 136
Score = 38.3 bits (85), Expect = 0.035
Identities = 20/52 (38%), Positives = 30/52 (57%)
Frame = +2
Query: 188 GYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVR 343
GY +++ GG D GF MK + R R+L + G Y P+ G+R+RK +R
Sbjct: 47 GYKVQITGGCDGSGFVMKPDLPGPRRQRILTATGVG-YVPKLPGQRRRKMMR 97
>UniRef50_A7DQN0 Cluster: Ribosomal protein S6e; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein S6e
- Candidatus Nitrosopumilus maritimus SCM1
Length = 137
Score = 37.9 bits (84), Expect = 0.046
Identities = 23/67 (34%), Positives = 37/67 (55%)
Frame = +2
Query: 143 MGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGE 322
+G E +A +G K L++ GG+DK G PM+ + +R +L+SKG + G+
Sbjct: 33 LGQETDASVVGLNGK---LKLTGGSDKSGVPMRNDIHGAARKYVLLSKGVG-LQDAEKGQ 88
Query: 323 RKRKSVR 343
R RK +R
Sbjct: 89 RVRKLMR 95
>UniRef50_Q978W7 Cluster: 30S ribosomal protein S6e; n=5;
Thermoplasmatales|Rep: 30S ribosomal protein S6e -
Thermoplasma volcanium
Length = 128
Score = 35.5 bits (78), Expect = 0.24
Identities = 27/94 (28%), Positives = 50/94 (53%)
Frame = +2
Query: 62 VSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMK 241
++ P TG E+ E ++ +++G EV D + + GY +++ GG+ GF M+
Sbjct: 8 IADPKTGKTYKREIPSE-RMSSLIGRKIGEEV--DGVFFDLVGYKMKITGGSSVDGFAMR 64
Query: 242 QGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVR 343
+ T + ++L+ K S YR ++G RKR + R
Sbjct: 65 PDLQTQGKKQILV-KYTSGYR-GKNGIRKRITAR 96
>UniRef50_Q87BM0 Cluster: Putative uncharacterized protein; n=1;
Xylella fastidiosa Temecula1|Rep: Putative
uncharacterized protein - Xylella fastidiosa (strain
Temecula1 / ATCC 700964)
Length = 109
Score = 35.1 bits (77), Expect = 0.32
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 187 GLCTSCRWRQRQARIPDETGRPDKQPCSSSDVKG 288
G C RWR ++ + DE G + PC+ DV+G
Sbjct: 17 GACCMARWRCQEINVTDEVGYGMRLPCTPHDVRG 50
>UniRef50_O86476 Cluster: Clumping factor B precursor; n=31;
Staphylococcus aureus|Rep: Clumping factor B precursor -
Staphylococcus aureus
Length = 913
Score = 33.9 bits (74), Expect = 0.75
Identities = 26/73 (35%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +2
Query: 38 IDAVMKLNVSYPAT-GCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGG 214
++ KL+ SY A L EV D+ K RI+YE A ++ GD K YV+ V G
Sbjct: 436 VNDTSKLSDSYYADPNDSNLKEVTDQFKNRIYYEHPNVASIK---FGDITKTYVVLVEGH 492
Query: 215 NDKQGFPMKQGVL 253
D G +K V+
Sbjct: 493 YDNTGKNLKTQVI 505
>UniRef50_Q6N427 Cluster: Phytoene dehydrogenase-related protein;
n=24; Bacteria|Rep: Phytoene dehydrogenase-related
protein - Rhodopseudomonas palustris
Length = 590
Score = 33.1 bits (72), Expect = 1.3
Identities = 16/34 (47%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Frame = -1
Query: 254 SGRPVSSGILACRCRQ-RHEVHSPSIHRLTDQPL 156
SGRPV+SGILA C Q +++ +P HR + P+
Sbjct: 22 SGRPVTSGILASLCEQWQNQPRTPLSHRSGNLPM 55
>UniRef50_UPI0001552B57 Cluster: PREDICTED: hypothetical protein;
n=2; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 215
Score = 32.3 bits (70), Expect = 2.3
Identities = 20/60 (33%), Positives = 24/60 (40%)
Frame = +2
Query: 146 GAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGER 325
GAE+ GDE G LR G +QG+ R R + HS R R G R
Sbjct: 44 GAEIPPAGAGDEPGGSTLRPCAGTRRQGYVTNARAPPRPRRRCFRAVRHSISRETRPGAR 103
>UniRef50_Q7VKW9 Cluster: Possible uroporphyrinogen III synthase;
n=1; Haemophilus ducreyi|Rep: Possible uroporphyrinogen
III synthase - Haemophilus ducreyi
Length = 251
Score = 32.3 bits (70), Expect = 2.3
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +2
Query: 50 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQL 172
M + ++YPA+ QKL ++ +H++ Y+ E+ AD L
Sbjct: 1 MNVLITYPASRAQKLVDMCQQHRIFAIYQPIFSVELGADLL 41
>UniRef50_A1SN07 Cluster: ATP-dependent helicase HrpA; n=4;
Actinomycetales|Rep: ATP-dependent helicase HrpA -
Nocardioides sp. (strain BAA-499 / JS614)
Length = 1282
Score = 32.3 bits (70), Expect = 2.3
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +2
Query: 101 VVDEHKLRIFYEKRMGAEVEADQLGDEW 184
VVDEH L FY+ R+GA+V + D+W
Sbjct: 774 VVDEHTLFDFYDARVGADVVSGAHFDQW 801
>UniRef50_Q22SD8 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 4408
Score = 32.3 bits (70), Expect = 2.3
Identities = 18/81 (22%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Frame = +2
Query: 41 DAVMKLNVSYPATGCQKLFEVVDEHKLRIFYE-KRMGAEVEADQLGDEWKGYVLRVAGGN 217
DA L YP C KL ++ +++ ++ E + ++E ++ ++W G+ +++ +
Sbjct: 3652 DACPHLKSVYPCLQCGKLIQLGNQNTTQVLTEAHKKPDQLENIKINNQWTGFYIKLE--D 3709
Query: 218 DKQGFPMKQGVLTNSRVRLLM 280
D F + QG + R+ L+
Sbjct: 3710 DMPTFKLDQGTSLDFRIFALI 3730
>UniRef50_Q8TRJ6 Cluster: Glycosyltransferase; n=1; Methanosarcina
acetivorans|Rep: Glycosyltransferase - Methanosarcina
acetivorans
Length = 812
Score = 32.3 bits (70), Expect = 2.3
Identities = 11/32 (34%), Positives = 22/32 (68%)
Frame = +2
Query: 233 PMKQGVLTNSRVRLLMSKGHSCYRPRRDGERK 328
P K+ ++T++R ++L+ +SCY PR G+ +
Sbjct: 405 PAKKNIITSNREKILVLATYSCYPPRGGGQHR 436
>UniRef50_UPI00015564F7 Cluster: PREDICTED: similar to likely
ortholog of H. sapiens myosin XVB (MYO15B); n=1;
Ornithorhynchus anatinus|Rep: PREDICTED: similar to
likely ortholog of H. sapiens myosin XVB (MYO15B) -
Ornithorhynchus anatinus
Length = 1593
Score = 31.9 bits (69), Expect = 3.0
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +2
Query: 128 FYEKRMGAEVEADQLGDEWKGYVLRVAG 211
F E+R AEVE+ G++W G+VL+ G
Sbjct: 876 FTEERYSAEVESWTTGEQWAGWVLQTRG 903
>UniRef50_A6QZZ0 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 372
Score = 31.9 bits (69), Expect = 3.0
Identities = 26/69 (37%), Positives = 36/69 (52%)
Frame = -1
Query: 260 CLSGRPVSSGILACRCRQRHEVHSPSIHRLTDQPLLRRPCAFRKRYEACARPPLRTTSGI 81
C+S P++ A R + RH++H+P + R P RRP A +E P RT+S
Sbjct: 211 CISHPPIA----ATRHQHRHDLHTP-LPRPKFTP--RRPRA--HSFEDNIHPLFRTSSPE 261
Query: 80 PLPGTKRLT 54
P PGT R T
Sbjct: 262 PPPGTTRGT 270
>UniRef50_A1FV38 Cluster: Transcriptional regulator, MarR family
with acetyltransferase activity; n=2; cellular
organisms|Rep: Transcriptional regulator, MarR family
with acetyltransferase activity - Stenotrophomonas
maltophilia R551-3
Length = 304
Score = 31.5 bits (68), Expect = 4.0
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 5/76 (6%)
Frame = +2
Query: 116 KLRIFYEKRMGAEVEADQLGDEW---KGYVLRVAGGNDKQGFPMKQGVLTNSRVRL--LM 280
++RI YE A + L E GYV RV ++QG+ +K ++RV + L
Sbjct: 38 EVRILYELAHHAPLSPSDLCRELGLDAGYVSRVTARFERQGYLIKDRSAEDARVVVLTLT 97
Query: 281 SKGHSCYRPRRDGERK 328
+ GHS + P + R+
Sbjct: 98 ALGHSVFAPLEETSRR 113
>UniRef50_Q2Y911 Cluster: Putative uncharacterized protein; n=2;
Nitrosospira multiformis ATCC 25196|Rep: Putative
uncharacterized protein - Nitrosospira multiformis
(strain ATCC 25196 / NCIMB 11849)
Length = 292
Score = 31.1 bits (67), Expect = 5.3
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -1
Query: 101 LRTTSGIPLPGTKRLTS*LRQSRLQPGDPLV 9
LR + P+P K LTS +Q R PG+P++
Sbjct: 258 LRLPASYPMPSVKTLTSVFQQLRSNPGNPIL 288
>UniRef50_A7SIY4 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 1116
Score = 31.1 bits (67), Expect = 5.3
Identities = 18/60 (30%), Positives = 27/60 (45%)
Frame = -1
Query: 191 SPSIHRLTDQPLLRRPCAFRKRYEACARPPLRTTSGIPLPGTKRLTS*LRQSRLQPGDPL 12
SPS + T P R+P + + + P R + +PLPG + S RQ P P+
Sbjct: 282 SPSSRQPTSPPSPRQPTSTPSPRQPTSPPSPRQPTSLPLPGQQTSLSSPRQRMSSPRSPI 341
>UniRef50_Q9WU42 Cluster: Nuclear receptor corepressor 2; n=15;
Amniota|Rep: Nuclear receptor corepressor 2 - Mus
musculus (Mouse)
Length = 2472
Score = 31.1 bits (67), Expect = 5.3
Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 3/74 (4%)
Frame = -1
Query: 272 DEHGCLSGRPVSSGILAC---RCRQRHEVHSPSIHRLTDQPLLRRPCAFRKRYEACARPP 102
D G L +P G++A R HE+ + R + PL RP K P
Sbjct: 1370 DPLGPLKLKPTHEGVVATVKEAGRSIHEIPREELRRTPELPLAPRPL---KEGSITQGTP 1426
Query: 101 LRTTSGIPLPGTKR 60
L+ SG P GTK+
Sbjct: 1427 LKYDSGAPSTGTKK 1440
>UniRef50_UPI000155618C Cluster: PREDICTED: similar to poliovirus
receptor-related 4, partial; n=1; Ornithorhynchus
anatinus|Rep: PREDICTED: similar to poliovirus
receptor-related 4, partial - Ornithorhynchus anatinus
Length = 345
Score = 30.7 bits (66), Expect = 6.9
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 205 RWRQRQARIPDETGRPDKQPCSSSDVKGP 291
RWRQ + PD RP ++PC +DV P
Sbjct: 20 RWRQGR---PDSLTRPTRRPCGPADVAAP 45
>UniRef50_UPI0000DA429C Cluster: PREDICTED: hypothetical protein;
n=1; Rattus norvegicus|Rep: PREDICTED: hypothetical
protein - Rattus norvegicus
Length = 295
Score = 30.7 bits (66), Expect = 6.9
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +1
Query: 241 TGRPDKQPCSSSDVKGPLMLQTAPRWREKT 330
TGR +PCS + PL+ P W+++T
Sbjct: 243 TGRAGTKPCSREALTAPLIKSQRPAWKKRT 272
>UniRef50_UPI0000D9BCD7 Cluster: PREDICTED: hypothetical protein;
n=1; Macaca mulatta|Rep: PREDICTED: hypothetical protein
- Macaca mulatta
Length = 273
Score = 30.7 bits (66), Expect = 6.9
Identities = 23/71 (32%), Positives = 29/71 (40%), Gaps = 10/71 (14%)
Frame = -1
Query: 248 RPVSSGILACRCRQRHEVHSPSIHR----------LTDQPLLRRPCAFRKRYEACARPPL 99
RP S + C R H H+ S R L DQPL C AC RP
Sbjct: 149 RPPLSAVPYCLPRTPHHAHTLSRRRRCCRRSQFRFLPDQPLFCFRCETADPGAACPRPRP 208
Query: 98 RTTSGIPLPGT 66
RT +G+ + G+
Sbjct: 209 RTLTGVVISGS 219
>UniRef50_Q60BZ5 Cluster: Selenium-binding family protein; n=4;
Proteobacteria|Rep: Selenium-binding family protein -
Methylococcus capsulatus
Length = 459
Score = 30.7 bits (66), Expect = 6.9
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Frame = +2
Query: 80 GCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKG----YVLRVAGGNDKQG 229
G +LF++ D H R YEK +GA+V + + W G Y + DK+G
Sbjct: 348 GKTRLFDISDPHHPRQVYEKTIGAQV--NMVSSSWDGQRLYYTSSLLANWDKKG 399
>UniRef50_Q5KUB4 Cluster: Phosphate ABC transporter; n=1;
Geobacillus kaustophilus|Rep: Phosphate ABC transporter
- Geobacillus kaustophilus
Length = 311
Score = 30.7 bits (66), Expect = 6.9
Identities = 22/65 (33%), Positives = 29/65 (44%)
Frame = -1
Query: 257 LSGRPVSSGILACRCRQRHEVHSPSIHRLTDQPLLRRPCAFRKRYEACARPPLRTTSGIP 78
L+G PV GILA + P+I R+TD L P +R+ A + S I
Sbjct: 156 LTGAPVGDGILAAAIVLSMMI-LPTITRITDDALCAVPNEWREANYALGGTKIEMISKIL 214
Query: 77 LPGTK 63
LP K
Sbjct: 215 LPAAK 219
>UniRef50_Q3KE39 Cluster: Helix-turn-helix, AraC type; n=1;
Pseudomonas fluorescens PfO-1|Rep: Helix-turn-helix,
AraC type - Pseudomonas fluorescens (strain PfO-1)
Length = 278
Score = 30.7 bits (66), Expect = 6.9
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +2
Query: 125 IFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLL 277
I RM + L D+W+ + L +A + M QG +T SR+RLL
Sbjct: 118 IHLASRMRNALLQASLDDDWESWALNLAERVEGHEAAMHQGSITGSRMRLL 168
>UniRef50_A1VF88 Cluster: NLP/P60 protein precursor; n=2;
Desulfovibrio vulgaris subsp. vulgaris|Rep: NLP/P60
protein precursor - Desulfovibrio vulgaris subsp.
vulgaris (strain DP4)
Length = 464
Score = 30.7 bits (66), Expect = 6.9
Identities = 13/33 (39%), Positives = 23/33 (69%)
Frame = -3
Query: 327 FLSPSRRGL*HEWPFDIRRRTRLFVRTPCFIGN 229
F +P+R G +PFD+ +RT +++ TP F+G+
Sbjct: 166 FTAPTRAG--QGYPFDMFQRTAVWMGTPVFVGH 196
>UniRef50_Q855K7 Cluster: Gp3; n=4; unclassified Siphoviridae|Rep:
Gp3 - Mycobacterium phage Che8
Length = 456
Score = 30.7 bits (66), Expect = 6.9
Identities = 21/97 (21%), Positives = 40/97 (41%)
Frame = +2
Query: 35 GIDAVMKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGG 214
G++A++ + + +V E R+ ++ A A G+ W +
Sbjct: 363 GLEAILVKALQIEGESVEDTVDVSFESPDRVTLGEKYSAASLAKAAGESWASIRRNILNY 422
Query: 215 NDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGER 325
N Q +KQ L +R ++ + G+ RP+ DG R
Sbjct: 423 NADQ---IKQDDLDRAREQITLFAGNPVQRPQEDGSR 456
>UniRef50_Q586S2 Cluster: Putative uncharacterized protein; n=1;
Trypanosoma brucei|Rep: Putative uncharacterized protein
- Trypanosoma brucei
Length = 940
Score = 30.7 bits (66), Expect = 6.9
Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Frame = -1
Query: 218 RCRQRHEVHSPSIHRL-TDQPLLRRPCAFRKRYEACARPPLRTTSGIPL 75
R +Q H H P +H++ D P++R P A + AC G PL
Sbjct: 646 RYQQHHHCHQPGLHQVPADGPVVRLPSALLQLRCACPIDQTEEPCGWPL 694
>UniRef50_Q17G68 Cluster: Formin 1,2/cappuccino; n=2; Culicidae|Rep:
Formin 1,2/cappuccino - Aedes aegypti (Yellowfever
mosquito)
Length = 891
Score = 30.7 bits (66), Expect = 6.9
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -2
Query: 130 KDTKLVLVHHFEQLLASRCRVRNV*LHDCVNPACSPG 20
KD + L+H + ++CR + V LH+ V P PG
Sbjct: 691 KDNNITLLHFIIKTYIAQCRKQGVLLHEVVLPVPDPG 727
>UniRef50_Q1EY35 Cluster: Major facilitator superfamily MFS_1
precursor; n=1; Clostridium oremlandii OhILAs|Rep: Major
facilitator superfamily MFS_1 precursor - Clostridium
oremlandii OhILAs
Length = 421
Score = 30.3 bits (65), Expect = 9.2
Identities = 17/61 (27%), Positives = 30/61 (49%)
Frame = -2
Query: 280 HQKTNTAVCQDALFHRESLLVVAASDTKYIALPFIA*LISLYFGAHALFVKDTKLVLVHH 101
++ T T + + + + S LV A +KY+ PFIA LI A+ + D +++
Sbjct: 116 YRATVTDIISEENYAKASGLVQIAGTSKYLISPFIAGLILTVSDIRAILIFDIATIIITA 175
Query: 100 F 98
F
Sbjct: 176 F 176
>UniRef50_A1ZBA1 Cluster: CG30115-PD, isoform D; n=4; Sophophora|Rep:
CG30115-PD, isoform D - Drosophila melanogaster (Fruit
fly)
Length = 1593
Score = 30.3 bits (65), Expect = 9.2
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +1
Query: 181 MEGLCTSCRWRQRQARIPDETGRPDKQPC 267
++ L + R+R+R A + +ET P K+PC
Sbjct: 988 LQKLAAAMRYRKRDAAVKEETKTPVKEPC 1016
>UniRef50_Q2H5M1 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 494
Score = 30.3 bits (65), Expect = 9.2
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 181 MEGLCTSCRWRQRQARIPDETGRPDKQPCSSS 276
+ G C +CR R+ + +P + GRP+ C SS
Sbjct: 6 LSGYCLTCRKRRVKCDVPADKGRPNCGRCISS 37
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 360,638,171
Number of Sequences: 1657284
Number of extensions: 7003396
Number of successful extensions: 21516
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 21003
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21493
length of database: 575,637,011
effective HSP length: 89
effective length of database: 428,138,735
effective search space used: 10703468375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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