Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0233
(344 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X67309-1|CAA47719.1| 249|Homo sapiens ribosomal protein S6 prot... 179 2e-45
M77232-1|AAA60289.1| 249|Homo sapiens ribosomal protein S6 prot... 179 2e-45
BC094826-1|AAH94826.1| 249|Homo sapiens ribosomal protein S6 pr... 179 2e-45
BC071908-1|AAH71908.1| 249|Homo sapiens ribosomal protein S6 pr... 179 2e-45
BC071907-1|AAH71907.1| 249|Homo sapiens ribosomal protein S6 pr... 179 2e-45
BC027620-1|AAH27620.1| 249|Homo sapiens ribosomal protein S6 pr... 179 2e-45
BC013296-1|AAH13296.1| 249|Homo sapiens ribosomal protein S6 pr... 179 2e-45
BC000524-1|AAH00524.1| 249|Homo sapiens ribosomal protein S6 pr... 179 2e-45
AL391834-6|CAM21143.1| 249|Homo sapiens ribosomal protein S6 pr... 179 2e-45
AB062123-1|BAB93455.1| 249|Homo sapiens ribosomal protein S6 pr... 179 2e-45
M20020-1|AAA60288.1| 249|Homo sapiens RPS6 protein. 176 1e-44
J03537-1|AAA60287.1| 249|Homo sapiens RPS6 protein. 176 1e-44
BC009427-1|AAH09427.2| 247|Homo sapiens RPS6 protein protein. 175 4e-44
AL391834-5|CAM21142.1| 218|Homo sapiens ribosomal protein S6 pr... 125 3e-29
BC052613-1|AAH52613.1| 99|Homo sapiens LOC728131 protein protein. 98 7e-21
AL391834-7|CAM21144.1| 91|Homo sapiens ribosomal protein S6 pr... 80 2e-15
AF274945-1|AAK07522.1| 79|Homo sapiens PNAS-20 protein. 55 7e-08
AB052764-1|BAC53797.1| 345|Homo sapiens shank-interacting prote... 29 5.2
AJ270770-4|CAB97215.1| 619|Homo sapiens T-cell transcription fa... 28 6.8
BC063316-1|AAH63316.1| 369|Homo sapiens FBXL17 protein protein. 28 9.0
>X67309-1|CAA47719.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 179 bits (435), Expect = 2e-45
Identities = 80/98 (81%), Positives = 88/98 (89%)
Frame = +2
Query: 50 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 229
MKLN+S+PATGCQKL EV DE KLR FYEKRM EV AD LG+EWKGYV+R++GGNDKQG
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60
Query: 230 FPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVR 343
FPMKQGVLT+ RVRLL+SKGHSCYRPRR GERKRKSVR
Sbjct: 61 FPMKQGVLTHGRVRLLLSKGHSCYRPRRTGERKRKSVR 98
>M77232-1|AAA60289.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 179 bits (435), Expect = 2e-45
Identities = 80/98 (81%), Positives = 88/98 (89%)
Frame = +2
Query: 50 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 229
MKLN+S+PATGCQKL EV DE KLR FYEKRM EV AD LG+EWKGYV+R++GGNDKQG
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60
Query: 230 FPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVR 343
FPMKQGVLT+ RVRLL+SKGHSCYRPRR GERKRKSVR
Sbjct: 61 FPMKQGVLTHGRVRLLLSKGHSCYRPRRTGERKRKSVR 98
>BC094826-1|AAH94826.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 179 bits (435), Expect = 2e-45
Identities = 80/98 (81%), Positives = 88/98 (89%)
Frame = +2
Query: 50 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 229
MKLN+S+PATGCQKL EV DE KLR FYEKRM EV AD LG+EWKGYV+R++GGNDKQG
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60
Query: 230 FPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVR 343
FPMKQGVLT+ RVRLL+SKGHSCYRPRR GERKRKSVR
Sbjct: 61 FPMKQGVLTHGRVRLLLSKGHSCYRPRRTGERKRKSVR 98
>BC071908-1|AAH71908.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 179 bits (435), Expect = 2e-45
Identities = 80/98 (81%), Positives = 88/98 (89%)
Frame = +2
Query: 50 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 229
MKLN+S+PATGCQKL EV DE KLR FYEKRM EV AD LG+EWKGYV+R++GGNDKQG
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60
Query: 230 FPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVR 343
FPMKQGVLT+ RVRLL+SKGHSCYRPRR GERKRKSVR
Sbjct: 61 FPMKQGVLTHGRVRLLLSKGHSCYRPRRTGERKRKSVR 98
>BC071907-1|AAH71907.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 179 bits (435), Expect = 2e-45
Identities = 80/98 (81%), Positives = 88/98 (89%)
Frame = +2
Query: 50 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 229
MKLN+S+PATGCQKL EV DE KLR FYEKRM EV AD LG+EWKGYV+R++GGNDKQG
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60
Query: 230 FPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVR 343
FPMKQGVLT+ RVRLL+SKGHSCYRPRR GERKRKSVR
Sbjct: 61 FPMKQGVLTHGRVRLLLSKGHSCYRPRRTGERKRKSVR 98
>BC027620-1|AAH27620.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 179 bits (435), Expect = 2e-45
Identities = 80/98 (81%), Positives = 88/98 (89%)
Frame = +2
Query: 50 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 229
MKLN+S+PATGCQKL EV DE KLR FYEKRM EV AD LG+EWKGYV+R++GGNDKQG
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60
Query: 230 FPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVR 343
FPMKQGVLT+ RVRLL+SKGHSCYRPRR GERKRKSVR
Sbjct: 61 FPMKQGVLTHGRVRLLLSKGHSCYRPRRTGERKRKSVR 98
>BC013296-1|AAH13296.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 179 bits (435), Expect = 2e-45
Identities = 80/98 (81%), Positives = 88/98 (89%)
Frame = +2
Query: 50 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 229
MKLN+S+PATGCQKL EV DE KLR FYEKRM EV AD LG+EWKGYV+R++GGNDKQG
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60
Query: 230 FPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVR 343
FPMKQGVLT+ RVRLL+SKGHSCYRPRR GERKRKSVR
Sbjct: 61 FPMKQGVLTHGRVRLLLSKGHSCYRPRRTGERKRKSVR 98
>BC000524-1|AAH00524.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 179 bits (435), Expect = 2e-45
Identities = 80/98 (81%), Positives = 88/98 (89%)
Frame = +2
Query: 50 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 229
MKLN+S+PATGCQKL EV DE KLR FYEKRM EV AD LG+EWKGYV+R++GGNDKQG
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60
Query: 230 FPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVR 343
FPMKQGVLT+ RVRLL+SKGHSCYRPRR GERKRKSVR
Sbjct: 61 FPMKQGVLTHGRVRLLLSKGHSCYRPRRTGERKRKSVR 98
>AL391834-6|CAM21143.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 179 bits (435), Expect = 2e-45
Identities = 80/98 (81%), Positives = 88/98 (89%)
Frame = +2
Query: 50 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 229
MKLN+S+PATGCQKL EV DE KLR FYEKRM EV AD LG+EWKGYV+R++GGNDKQG
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60
Query: 230 FPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVR 343
FPMKQGVLT+ RVRLL+SKGHSCYRPRR GERKRKSVR
Sbjct: 61 FPMKQGVLTHGRVRLLLSKGHSCYRPRRTGERKRKSVR 98
>AB062123-1|BAB93455.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 179 bits (435), Expect = 2e-45
Identities = 80/98 (81%), Positives = 88/98 (89%)
Frame = +2
Query: 50 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 229
MKLN+S+PATGCQKL EV DE KLR FYEKRM EV AD LG+EWKGYV+R++GGNDKQG
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60
Query: 230 FPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVR 343
FPMKQGVLT+ RVRLL+SKGHSCYRPRR GERKRKSVR
Sbjct: 61 FPMKQGVLTHGRVRLLLSKGHSCYRPRRTGERKRKSVR 98
>M20020-1|AAA60288.1| 249|Homo sapiens RPS6 protein.
Length = 249
Score = 176 bits (429), Expect = 1e-44
Identities = 79/98 (80%), Positives = 87/98 (88%)
Frame = +2
Query: 50 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 229
MKLN+S+PATGCQKL EV DE LR FYEKRM EV AD LG+EWKGYV+R++GGNDKQG
Sbjct: 1 MKLNISFPATGCQKLIEVDDERTLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60
Query: 230 FPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVR 343
FPMKQGVLT+ RVRLL+SKGHSCYRPRR GERKRKSVR
Sbjct: 61 FPMKQGVLTHGRVRLLLSKGHSCYRPRRTGERKRKSVR 98
>J03537-1|AAA60287.1| 249|Homo sapiens RPS6 protein.
Length = 249
Score = 176 bits (429), Expect = 1e-44
Identities = 79/98 (80%), Positives = 87/98 (88%)
Frame = +2
Query: 50 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 229
MKLN+S+PATGCQKL EV DE KLR FYEKRM EV AD LG+EWKGYV+R++GGNDK G
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKXG 60
Query: 230 FPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVR 343
FPMKQGVLT+ RVRLL+SKGHSCYRPRR GERKRKSVR
Sbjct: 61 FPMKQGVLTHGRVRLLLSKGHSCYRPRRTGERKRKSVR 98
>BC009427-1|AAH09427.2| 247|Homo sapiens RPS6 protein protein.
Length = 247
Score = 175 bits (425), Expect = 4e-44
Identities = 78/96 (81%), Positives = 86/96 (89%)
Frame = +2
Query: 56 LNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFP 235
LN+S+PATGCQKL EV DE KLR FYEKRM EV AD LG+EWKGYV+R++GGNDKQGFP
Sbjct: 1 LNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQGFP 60
Query: 236 MKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVR 343
MKQGVLT+ RVRLL+SKGHSCYRPRR GERKRKSVR
Sbjct: 61 MKQGVLTHGRVRLLLSKGHSCYRPRRTGERKRKSVR 96
>AL391834-5|CAM21142.1| 218|Homo sapiens ribosomal protein S6
protein.
Length = 218
Score = 125 bits (302), Expect = 3e-29
Identities = 55/67 (82%), Positives = 61/67 (91%)
Frame = +2
Query: 143 MGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGE 322
M EV AD LG+EWKGYV+R++GGNDKQGFPMKQGVLT+ RVRLL+SKGHSCYRPRR GE
Sbjct: 1 MATEVAADALGEEWKGYVVRISGGNDKQGFPMKQGVLTHGRVRLLLSKGHSCYRPRRTGE 60
Query: 323 RKRKSVR 343
RKRKSVR
Sbjct: 61 RKRKSVR 67
>BC052613-1|AAH52613.1| 99|Homo sapiens LOC728131 protein protein.
Length = 99
Score = 97.9 bits (233), Expect = 7e-21
Identities = 47/80 (58%), Positives = 57/80 (71%), Gaps = 5/80 (6%)
Frame = +2
Query: 50 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 229
MKLN S+ A GCQKL +V DE KLR FYEK M E+ A LG+EWKGYV+R++GGN+KQG
Sbjct: 1 MKLNSSFLAIGCQKLIKVEDERKLRTFYEKHMATEIAAYALGEEWKGYVVRISGGNNKQG 60
Query: 230 FPM-----KQGVLTNSRVRL 274
F KQG+LT+ RL
Sbjct: 61 FLFVGGNNKQGILTHGHARL 80
>AL391834-7|CAM21144.1| 91|Homo sapiens ribosomal protein S6
protein.
Length = 91
Score = 79.8 bits (188), Expect = 2e-15
Identities = 35/46 (76%), Positives = 38/46 (82%)
Frame = +2
Query: 50 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWK 187
MKLN+S+PATGCQKL EV DE KLR FYEKRM EV AD LG+EWK
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWK 46
>AF274945-1|AAK07522.1| 79|Homo sapiens PNAS-20 protein.
Length = 79
Score = 54.8 bits (126), Expect = 7e-08
Identities = 23/26 (88%), Positives = 25/26 (96%)
Frame = +2
Query: 266 VRLLMSKGHSCYRPRRDGERKRKSVR 343
+RLL+SKGHSCYRPRR GERKRKSVR
Sbjct: 2 IRLLLSKGHSCYRPRRTGERKRKSVR 27
>AB052764-1|BAC53797.1| 345|Homo sapiens shank-interacting
protein-like 1 alpha protein.
Length = 345
Score = 28.7 bits (61), Expect = 5.2
Identities = 15/50 (30%), Positives = 22/50 (44%)
Frame = +2
Query: 176 DEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGER 325
+E G + R G D++G VL RV L + +C+ P G R
Sbjct: 173 EELAGSLARAIAGGDEKGAAQVAAVLAQHRVALSVQLQEACFPPGPSGCR 222
>AJ270770-4|CAB97215.1| 619|Homo sapiens T-cell transcription
factor-4 long C-terminal isoform 4 protein.
Length = 619
Score = 28.3 bits (60), Expect = 6.8
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = -3
Query: 243 CFIGNPCLSLPPATRST*P 187
CF+ NPCLSLPP T + P
Sbjct: 444 CFL-NPCLSLPPITDANTP 461
>BC063316-1|AAH63316.1| 369|Homo sapiens FBXL17 protein protein.
Length = 369
Score = 27.9 bits (59), Expect = 9.0
Identities = 17/73 (23%), Positives = 29/73 (39%)
Frame = -1
Query: 293 SGPLTSEDEHGCLSGRPVSSGILACRCRQRHEVHSPSIHRLTDQPLLRRPCAFRKRYEAC 114
+ PL+++ +H C S C C + +P I++L LL+ R+R
Sbjct: 284 TAPLSAQQQHECGDADCRESPENPCDCHREPPPETPDINQLPPSILLKVGLGERRRDARF 343
Query: 113 ARPPLRTTSGIPL 75
PP + L
Sbjct: 344 PPPPAPASEAFSL 356
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,894,188
Number of Sequences: 237096
Number of extensions: 1007082
Number of successful extensions: 3074
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 2998
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3074
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1968306988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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