Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0233
(344 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132902-1|CAB81996.1| 246|Caenorhabditis elegans Hypothetical ... 162 7e-41
AF099919-13|AAC68798.1| 636|Caenorhabditis elegans Hypothetical... 29 1.2
AF078787-7|AAC26954.2| 518|Caenorhabditis elegans Vegf (vascula... 28 2.1
Z70754-2|CAC42308.1| 764|Caenorhabditis elegans Hypothetical pr... 27 3.6
Z70754-1|CAA94771.2| 966|Caenorhabditis elegans Hypothetical pr... 27 3.6
AF164113-1|AAD45535.1| 810|Caenorhabditis elegans zinc finger p... 27 3.6
AF040649-6|AAB95006.1| 1360|Caenorhabditis elegans Hypothetical ... 26 8.3
AF025472-7|AAB71069.1| 1466|Caenorhabditis elegans Hypothetical ... 26 8.3
AC024749-1|AAF60434.1| 1466|Caenorhabditis elegans Hypothetical ... 26 8.3
AC006804-1|AAF60755.1| 340|Caenorhabditis elegans Hypothetical ... 26 8.3
>AL132902-1|CAB81996.1| 246|Caenorhabditis elegans Hypothetical
protein Y71A12B.1 protein.
Length = 246
Score = 162 bits (393), Expect = 7e-41
Identities = 72/98 (73%), Positives = 83/98 (84%)
Frame = +2
Query: 50 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 229
M+LN +YPATG QK FEV +E KLR+F+EKRM EV D LGDEWKGYV+R+ GGNDKQG
Sbjct: 1 MRLNFAYPATGLQKSFEVDEEKKLRLFFEKRMSQEVAIDALGDEWKGYVVRIGGGNDKQG 60
Query: 230 FPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVR 343
FPMKQG+LTN RVRLL+ KG SCYR R++GERKRKSVR
Sbjct: 61 FPMKQGILTNGRVRLLLKKGQSCYRERKNGERKRKSVR 98
>AF099919-13|AAC68798.1| 636|Caenorhabditis elegans Hypothetical
protein F40G9.1 protein.
Length = 636
Score = 28.7 bits (61), Expect = 1.2
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Frame = +2
Query: 68 YPATGCQKLFEVVDEHK---LRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQ 226
Y G ++FE+ E K RIF EK + + ++ ++ L++ G NDK+
Sbjct: 6 YLHVGLNRIFEIAKEKKNGKFRIFLEKNVKNVIFLQEIFEKSLFLCLKINGSNDKK 61
>AF078787-7|AAC26954.2| 518|Caenorhabditis elegans Vegf (vascular
endothelial growthfactor) receptor family protein 2
protein.
Length = 518
Score = 27.9 bits (59), Expect = 2.1
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +2
Query: 83 CQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQ 226
C K F+ + ++ E+++ E E Q D W G LR G DK+
Sbjct: 272 CVKFFKNYMQEEVVQNIERKLQFEREEQQELDSWTGKSLRAEGVEDKE 319
>Z70754-2|CAC42308.1| 764|Caenorhabditis elegans Hypothetical
protein F58E6.1b protein.
Length = 764
Score = 27.1 bits (57), Expect = 3.6
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = -1
Query: 200 EVHSPSIHRLTDQPLLRRPCAFRKRYEACARPPLRTTSGIPLPGTK 63
+ ++ + +++ + LRR KRY C L+T GI L G K
Sbjct: 345 DTNNENSNKVAKKVALRRDSVATKRYCLCYNIQLQTNCGIELVGKK 390
>Z70754-1|CAA94771.2| 966|Caenorhabditis elegans Hypothetical
protein F58E6.1a protein.
Length = 966
Score = 27.1 bits (57), Expect = 3.6
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = -1
Query: 200 EVHSPSIHRLTDQPLLRRPCAFRKRYEACARPPLRTTSGIPLPGTK 63
+ ++ + +++ + LRR KRY C L+T GI L G K
Sbjct: 345 DTNNENSNKVAKKVALRRDSVATKRYCLCYNIQLQTNCGIELVGKK 390
>AF164113-1|AAD45535.1| 810|Caenorhabditis elegans zinc finger
protein STAT-B protein.
Length = 810
Score = 27.1 bits (57), Expect = 3.6
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = -1
Query: 200 EVHSPSIHRLTDQPLLRRPCAFRKRYEACARPPLRTTSGIPLPGTK 63
+ ++ + +++ + LRR KRY C L+T GI L G K
Sbjct: 391 DTNNENSNKVAKKVALRRDSVATKRYCLCYNIQLQTNCGIELVGKK 436
>AF040649-6|AAB95006.1| 1360|Caenorhabditis elegans Hypothetical
protein F33H12.6 protein.
Length = 1360
Score = 25.8 bits (54), Expect = 8.3
Identities = 7/27 (25%), Positives = 14/27 (51%)
Frame = -1
Query: 194 HSPSIHRLTDQPLLRRPCAFRKRYEAC 114
+ P +HR+ ++ RPC + + C
Sbjct: 511 NEPELHRIVTTAMMHRPCGAQNPHSPC 537
>AF025472-7|AAB71069.1| 1466|Caenorhabditis elegans Hypothetical
protein ZK250.9 protein.
Length = 1466
Score = 25.8 bits (54), Expect = 8.3
Identities = 7/27 (25%), Positives = 14/27 (51%)
Frame = -1
Query: 194 HSPSIHRLTDQPLLRRPCAFRKRYEAC 114
+ P +HR+ ++ RPC + + C
Sbjct: 617 NEPELHRIVTTAMMHRPCGAQNPHSPC 643
>AC024749-1|AAF60434.1| 1466|Caenorhabditis elegans Hypothetical
protein Y16E11A.2 protein.
Length = 1466
Score = 25.8 bits (54), Expect = 8.3
Identities = 7/27 (25%), Positives = 14/27 (51%)
Frame = -1
Query: 194 HSPSIHRLTDQPLLRRPCAFRKRYEAC 114
+ P +HR+ ++ RPC + + C
Sbjct: 617 NEPELHRIVTTAMMHRPCGAQNPHSPC 643
>AC006804-1|AAF60755.1| 340|Caenorhabditis elegans Hypothetical
protein Y53G8B.2 protein.
Length = 340
Score = 25.8 bits (54), Expect = 8.3
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +2
Query: 83 CQKLFEVVDEHKLRIFYEK 139
CQKL E+ DEHK + EK
Sbjct: 315 CQKLTELFDEHKEKYGVEK 333
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,183,851
Number of Sequences: 27780
Number of extensions: 165615
Number of successful extensions: 473
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 460
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 473
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 451081596
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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