Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0229
(476 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82288-5|CAB05324.1| 380|Caenorhabditis elegans Hypothetical pr... 37 0.009
Z68314-7|CAA92662.2| 872|Caenorhabditis elegans Hypothetical pr... 35 0.035
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 33 0.080
Z75545-1|CAB61025.1| 665|Caenorhabditis elegans Hypothetical pr... 32 0.19
AB000913-1|BAA21715.1| 665|Caenorhabditis elegans UNC-14 protein. 32 0.19
Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical pr... 32 0.24
Z81528-4|CAB04281.1| 575|Caenorhabditis elegans Hypothetical pr... 32 0.24
Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical pr... 31 0.32
Z81044-11|CAB02809.2| 476|Caenorhabditis elegans Hypothetical p... 30 0.99
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 29 1.3
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 29 1.3
Z81560-7|CAB76737.2| 188|Caenorhabditis elegans Hypothetical pr... 29 1.7
AC024762-5|AAF59478.2| 335|Caenorhabditis elegans Hypothetical ... 29 2.3
Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical pr... 28 4.0
Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical pr... 28 4.0
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 28 4.0
Z84574-6|CAE17784.1| 174|Caenorhabditis elegans Hypothetical pr... 27 5.3
U67956-2|AAB07691.2| 1254|Caenorhabditis elegans Dumpy : shorter... 27 5.3
U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical pr... 27 5.3
U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical pr... 27 5.3
U28739-9|AAB93451.1| 480|Caenorhabditis elegans Hypothetical pr... 27 7.0
AC024817-16|AAF59585.2| 610|Caenorhabditis elegans Hypothetical... 27 7.0
Z73906-7|CAA98119.2| 428|Caenorhabditis elegans Hypothetical pr... 27 9.2
AF039047-13|AAM15587.1| 402|Caenorhabditis elegans Coexpressed ... 27 9.2
AF039038-1|AAK21435.1| 877|Caenorhabditis elegans Hypothetical ... 27 9.2
AF038612-3|AAB92045.2| 432|Caenorhabditis elegans Hypothetical ... 27 9.2
>Z82288-5|CAB05324.1| 380|Caenorhabditis elegans Hypothetical
protein ZK896.7 protein.
Length = 380
Score = 36.7 bits (81), Expect = 0.009
Identities = 25/76 (32%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Frame = +1
Query: 235 QHAAAFFPNSCRPTLTPSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRALSMPTTTLA 414
+H F S PT T S TT+ R P T T ++TAT PTTT++
Sbjct: 136 EHKELEFVCSYDPTATTSAAPTTIPPTTTTTRAPTTTTVRKTTQTTATTMTTPKPTTTVS 195
Query: 415 LSIITG-QSTTCQDAC 459
+ T TT AC
Sbjct: 196 TTTTTTVPPTTTPKAC 211
>Z68314-7|CAA92662.2| 872|Caenorhabditis elegans Hypothetical
protein F07H5.8 protein.
Length = 872
Score = 34.7 bits (76), Expect = 0.035
Identities = 17/68 (25%), Positives = 33/68 (48%)
Frame = +1
Query: 256 PNSCRPTLTPSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRALSMPTTTLALSIITGQ 435
P+ C+PT +P + ++++ ++ P T +C+ + TP+ + TTT + I
Sbjct: 268 PSQCQPTCSP-QCIQSVTVSIQTTAQPTTASCIPACQPACTPQCVQAVTTT--ETCIPAC 324
Query: 436 STTCQDAC 459
CQ C
Sbjct: 325 QPACQPQC 332
Score = 29.5 bits (63), Expect = 1.3
Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Frame = +1
Query: 262 SCRPTLTPSRFTTTLSLPLRGLRY--PATVTCLSIARSTATPRALSMPTTTLALSIITGQ 435
+C+P P LS G+ P T C+SI + P +++ TTT A Q
Sbjct: 359 ACQPACQPQCVYQYLSSGSSGISTVPPVTKVCISICQPACDPGCVAIYTTTPAPLHCVSQ 418
Query: 436 STTCQDAC 459
CQ AC
Sbjct: 419 ---CQPAC 423
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 33.5 bits (73), Expect = 0.080
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Frame = +1
Query: 271 PTLTPSRFTTTLSLPLRGLRYPATVTCLSIA--RSTATPRALSMPTTTLALSIITGQSTT 444
PT T + TTT ++P P T T + +T TP + P TT + + T +TT
Sbjct: 203 PTTTTTTPTTTTTVPTTTTTTPTTTTTTTTTPTTTTTTPTTTTTPATTTSETTTTTPTTT 262
Query: 445 CQ 450
Q
Sbjct: 263 TQ 264
Score = 32.3 bits (70), Expect = 0.19
Identities = 18/58 (31%), Positives = 24/58 (41%)
Frame = +1
Query: 271 PTLTPSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRALSMPTTTLALSIITGQSTT 444
PT T + TTT + P P T T +T ++PTTT T +TT
Sbjct: 175 PTTTTTTPTTTTTTPTTTTTAPTTTTTTPTTTTTTPTTTTTVPTTTTTTPTTTTTTTT 232
Score = 31.1 bits (67), Expect = 0.43
Identities = 19/67 (28%), Positives = 26/67 (38%)
Frame = +1
Query: 208 TSEPRKGTGQHAAAFFPNSCRPTLTPSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRA 387
T+ P T + + PT T + TTT + P P T T +TA
Sbjct: 140 TTTPTTTTTETTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTAPTTT 199
Query: 388 LSMPTTT 408
+ PTTT
Sbjct: 200 TTTPTTT 206
Score = 30.7 bits (66), Expect = 0.57
Identities = 19/58 (32%), Positives = 26/58 (44%)
Frame = +1
Query: 271 PTLTPSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRALSMPTTTLALSIITGQSTT 444
PT T + TTT + P P T T + +T TP + TTT + T +TT
Sbjct: 189 PTTTTTAPTTTTTTPTTTTTTPTTTTTVP-TTTTTTPTTTTTTTTTPTTTTTTPTTTT 245
Score = 30.7 bits (66), Expect = 0.57
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Frame = +1
Query: 271 PTLTPSRFTTTLSLPLRGLRYPATVTC--LSIARSTATP-RALSMPTTTLALSIITGQST 441
PT T + TTT + P P T T + +T TP + PTTT + T ++T
Sbjct: 196 PTTTTTTPTTTTTTPTTTTTVPTTTTTTPTTTTTTTTTPTTTTTTPTTTTTPATTTSETT 255
Query: 442 T 444
T
Sbjct: 256 T 256
Score = 29.9 bits (64), Expect = 0.99
Identities = 17/58 (29%), Positives = 23/58 (39%)
Frame = +1
Query: 271 PTLTPSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRALSMPTTTLALSIITGQSTT 444
PT T + TTT + P P T T +T + PTTT + T + T
Sbjct: 168 PTTTTTTPTTTTTTPTTTTTTPTTTTTAPTTTTTTPTTTTTTPTTTTTVPTTTTTTPT 225
Score = 29.9 bits (64), Expect = 0.99
Identities = 17/58 (29%), Positives = 23/58 (39%)
Frame = +1
Query: 271 PTLTPSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRALSMPTTTLALSIITGQSTT 444
PT T + TTT + P P T T +T + PTTT + +TT
Sbjct: 182 PTTTTTTPTTTTTAPTTTTTTPTTTTTTPTTTTTVPTTTTTTPTTTTTTTTTPTTTTT 239
Score = 29.5 bits (63), Expect = 1.3
Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 4/65 (6%)
Frame = +1
Query: 262 SCRPTLTPSRFTTTLSLPLRGLRYPATVTC--LSIARSTATP--RALSMPTTTLALSIIT 429
S T TP+ TTT + P P T T + +T TP + PTTT + T
Sbjct: 71 STTTTTTPTTPTTTTTTPTTTTTTPTTTTTTPTTTTETTTTPTTETTTTPTTTTPTTTTT 130
Query: 430 GQSTT 444
+TT
Sbjct: 131 TPTTT 135
Score = 29.1 bits (62), Expect = 1.7
Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 3/61 (4%)
Frame = +1
Query: 271 PTLTPSRFTTTLSLPLRGLRYPAT---VTCLSIARSTATPRALSMPTTTLALSIITGQST 441
PT T + TTT + P P T T +T TP + TTT + T ++T
Sbjct: 81 PTTTTTTPTTTTTTPTTTTTTPTTTTETTTTPTTETTTTPTTTTPTTTTTTPTTTTTETT 140
Query: 442 T 444
T
Sbjct: 141 T 141
Score = 29.1 bits (62), Expect = 1.7
Identities = 17/58 (29%), Positives = 22/58 (37%)
Frame = +1
Query: 271 PTLTPSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRALSMPTTTLALSIITGQSTT 444
PT T + TTT + P P T T +T + PTTT T + T
Sbjct: 154 PTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTAPTTTTTTPTTTTTTPT 211
Score = 27.9 bits (59), Expect = 4.0
Identities = 20/64 (31%), Positives = 26/64 (40%), Gaps = 7/64 (10%)
Frame = +1
Query: 274 TLTPSRFTTTLSLPLRGLRYPATVTCLSIARS-------TATPRALSMPTTTLALSIITG 432
T TP+ TTT + P P T T + S T T + + PTTT T
Sbjct: 221 TTTPTTTTTTTTTPTTTTTTPTTTTTPATTTSETTTTTPTTTTQTTTKPTTTTTTPTTTP 280
Query: 433 QSTT 444
+TT
Sbjct: 281 TTTT 284
Score = 26.6 bits (56), Expect = 9.2
Identities = 18/59 (30%), Positives = 26/59 (44%)
Frame = +1
Query: 274 TLTPSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRALSMPTTTLALSIITGQSTTCQ 450
T TP+ TTT + P T T + +T T + PTTT + T +TT +
Sbjct: 92 TTTPTTTTTTPTTTTETTTTPTTETTTTPTTTTPT-TTTTTPTTTTTETTTTPTTTTTE 149
>Z75545-1|CAB61025.1| 665|Caenorhabditis elegans Hypothetical
protein K10D3.2 protein.
Length = 665
Score = 32.3 bits (70), Expect = 0.19
Identities = 16/47 (34%), Positives = 28/47 (59%)
Frame = +1
Query: 283 PSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRALSMPTTTLALSI 423
P+R +T P R R P + + +SI+ +T+TPR+ P+TT + +
Sbjct: 567 PARLSTA---PSRRSRIPLSTSRISISSTTSTPRSARSPSTTSRIRV 610
>AB000913-1|BAA21715.1| 665|Caenorhabditis elegans UNC-14 protein.
Length = 665
Score = 32.3 bits (70), Expect = 0.19
Identities = 16/47 (34%), Positives = 28/47 (59%)
Frame = +1
Query: 283 PSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRALSMPTTTLALSI 423
P+R +T P R R P + + +SI+ +T+TPR+ P+TT + +
Sbjct: 567 PARLSTA---PSRRSRIPLSTSRISISSTTSTPRSARSPSTTSRIRV 610
>Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical
protein H02I12.1 protein.
Length = 1319
Score = 31.9 bits (69), Expect = 0.24
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = +1
Query: 271 PTLTPSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRALSMPTTTLALSIITGQSTT 444
PT T S T+T++ P ++ T + +T TP ++ TTT +T +TT
Sbjct: 244 PTTTVSYSTSTITTPQEDDSEYSSTTSADVISTTTTPSIDAIETTTTGFDAVTTTTTT 301
>Z81528-4|CAB04281.1| 575|Caenorhabditis elegans Hypothetical
protein F35E2.5 protein.
Length = 575
Score = 31.9 bits (69), Expect = 0.24
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +1
Query: 256 PNSCRP-TLTPSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRALSMPTTTLALSIITG 432
PN +P T + ++ TTT S R AT T L+ TP ++PTT+LAL T
Sbjct: 321 PNVTKPITRSTTKRTTTRSTTKRLTTTKAT-TVLTTTPVKVTPATTTLPTTSLALETTTT 379
Query: 433 QSTT 444
+ T
Sbjct: 380 ATRT 383
>Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical
protein F56H9.6 protein.
Length = 245
Score = 31.5 bits (68), Expect = 0.32
Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Frame = +1
Query: 271 PTLTPSRFTTTLSLPLRGLRY-PATVTCLSIARSTATPRALSMPTTTLALSIITGQSTT 444
PT T + TTT + P P T T + +T TP + TTT + T TT
Sbjct: 65 PTTTSTTSTTTTTTPTTTTTTTPTTTTSTTSTTTTTTPTTTTSTTTTTTTTTTTATPTT 123
Score = 26.6 bits (56), Expect = 9.2
Identities = 19/63 (30%), Positives = 25/63 (39%), Gaps = 5/63 (7%)
Frame = +1
Query: 271 PTLTPSRFTTTLSLP-----LRGLRYPATVTCLSIARSTATPRALSMPTTTLALSIITGQ 435
PT T + TTT + + P T T ST + + PTTT + T
Sbjct: 32 PTTTTTEATTTTEITTTTEEVTTTTEPVTTTTTPTTTSTTSTTTTTTPTTTTTTTPTTTT 91
Query: 436 STT 444
STT
Sbjct: 92 STT 94
>Z81044-11|CAB02809.2| 476|Caenorhabditis elegans Hypothetical
protein C30H6.4 protein.
Length = 476
Score = 29.9 bits (64), Expect = 0.99
Identities = 17/63 (26%), Positives = 26/63 (41%)
Frame = +1
Query: 256 PNSCRPTLTPSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRALSMPTTTLALSIITGQ 435
P + +PT T TTT ++P +T T S+ +T T+T + T
Sbjct: 255 PETTKPTTTTPTTTTTTTIPSTTSSTTSTSTTTSVVTTTTVTSTTEPTTSTSTPTTTTTM 314
Query: 436 STT 444
TT
Sbjct: 315 QTT 317
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 29.5 bits (63), Expect = 1.3
Identities = 19/56 (33%), Positives = 28/56 (50%)
Frame = +1
Query: 274 TLTPSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRALSMPTTTLALSIITGQST 441
T T + FTTT+ L P+T T + ST++ + PTTTL S + +T
Sbjct: 388 TTTSTTFTTTM-LTSTTTEEPSTSTTTTEVTSTSSTVTTTEPTTTLTTSTASTSTT 442
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 29.5 bits (63), Expect = 1.3
Identities = 19/56 (33%), Positives = 28/56 (50%)
Frame = +1
Query: 274 TLTPSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRALSMPTTTLALSIITGQST 441
T T + FTTT+ L P+T T + ST++ + PTTTL S + +T
Sbjct: 388 TTTSTTFTTTM-LTSTTTEEPSTSTTTTEVTSTSSTVTTTEPTTTLTTSTASTSTT 442
>Z81560-7|CAB76737.2| 188|Caenorhabditis elegans Hypothetical
protein K02E2.8a protein.
Length = 188
Score = 29.1 bits (62), Expect = 1.7
Identities = 18/56 (32%), Positives = 21/56 (37%)
Frame = +1
Query: 241 AAAFFPNSCRPTLTPSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRALSMPTTT 408
AAA P L P TTT ++ P T T +T T PTTT
Sbjct: 11 AAACIPTQFVTPLNPGTITTTTTISAPTTTVPITTTNPVSTTTTTTTTTTEAPTTT 66
>AC024762-5|AAF59478.2| 335|Caenorhabditis elegans Hypothetical
protein Y38F2AL.1 protein.
Length = 335
Score = 28.7 bits (61), Expect = 2.3
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +2
Query: 14 RHSTSARPRHHTTLFNYDRYLTEYEHDIDRQNVQNTFRH 130
R++T P H F+YD+Y +E + D V RH
Sbjct: 117 RYATVTEPLHCVYKFDYDKYSGTFELEDDNSPVGEVNRH 155
>Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical
protein C49C3.13 protein.
Length = 499
Score = 27.9 bits (59), Expect = 4.0
Identities = 23/93 (24%), Positives = 35/93 (37%)
Frame = +1
Query: 166 DFGSPSCVL*KVRKTSEPRKGTGQHAAAFFPNSCRPTLTPSRFTTTLSLPLRGLRYPATV 345
+ +P+C + T A+ S T+T ++ TTT + P P T
Sbjct: 220 NLATPTCRYDPTSTAPHIKYDTSYTCASTTTVSTTSTVTTTKPTTTTTTPTTTTTTPTTT 279
Query: 346 TCLSIARSTATPRALSMPTTTLALSIITGQSTT 444
T T T + PTTT S T ++T
Sbjct: 280 TTTPTTTPTTT---TTTPTTTTTESTTTETTST 309
>Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical
protein C29E6.1a protein.
Length = 812
Score = 27.9 bits (59), Expect = 4.0
Identities = 17/57 (29%), Positives = 26/57 (45%)
Frame = +1
Query: 274 TLTPSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRALSMPTTTLALSIITGQSTT 444
T + + TTT + + + P T T S T T + PTT+ + + T STT
Sbjct: 386 TTSTKKLTTTTTTTPKPSQKPTTTTTKSPVVITTTTKTSPKPTTSPSTTTSTTTSTT 442
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 27.9 bits (59), Expect = 4.0
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 5/70 (7%)
Frame = +1
Query: 250 FFPNSCRPTLTPSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRAL-----SMPTTTLA 414
F+P + T++P TT+++P P T +TATP + S TTT+
Sbjct: 469 FYPVTTVSTMSPP---TTVTVPTTPTPVPTTTNTPPANPTTATPTTVGTMTPSTGTTTVP 525
Query: 415 LSIITGQSTT 444
+ TG TT
Sbjct: 526 VPTTTGSPTT 535
>Z84574-6|CAE17784.1| 174|Caenorhabditis elegans Hypothetical
protein F33E2.7 protein.
Length = 174
Score = 27.5 bits (58), Expect = 5.3
Identities = 16/49 (32%), Positives = 20/49 (40%), Gaps = 1/49 (2%)
Frame = +1
Query: 265 CRPTLT-PSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRALSMPTTT 408
C P+ PS TTT + P P T T +T + PTTT
Sbjct: 78 CDPSKPKPSTTTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTT 126
Score = 26.6 bits (56), Expect = 9.2
Identities = 15/51 (29%), Positives = 19/51 (37%)
Frame = +1
Query: 256 PNSCRPTLTPSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRALSMPTTT 408
P T T + TTT + P P T T +T + PTTT
Sbjct: 83 PKPSTTTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTT 133
>U67956-2|AAB07691.2| 1254|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 6 protein.
Length = 1254
Score = 27.5 bits (58), Expect = 5.3
Identities = 26/91 (28%), Positives = 34/91 (37%), Gaps = 4/91 (4%)
Frame = +1
Query: 208 TSEPRKGTGQHAAAFFPNSCRPTLTPSRFT----TTLSLPLRGLRYPATVTCLSIARSTA 375
T EP TGQH + PT T T TT P P T + + T+
Sbjct: 523 TEEPTTTTGQHKTEKAITTEEPTTTEESSTTEEVTTTEEPANTGNPPTTENPTTTEQPTS 582
Query: 376 TPRALSMPTTTLALSIITGQSTTCQDACDVE 468
T +TT AL T Q+ T ++ E
Sbjct: 583 TAE-----STTTALPFTTEQTVTTEEPTTAE 608
>U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical
protein F49E10.2a protein.
Length = 790
Score = 27.5 bits (58), Expect = 5.3
Identities = 15/55 (27%), Positives = 25/55 (45%)
Frame = +1
Query: 280 TPSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRALSMPTTTLALSIITGQSTT 444
T S +TT P P+T + +T TP+ + +T+ + + T STT
Sbjct: 586 TTSTSSTTTQKPSTTTTVPSTTPTSTTTTTTTTPKPTTSTSTSTSTTTTTTTSTT 640
>U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical
protein F49E10.2b protein.
Length = 842
Score = 27.5 bits (58), Expect = 5.3
Identities = 15/55 (27%), Positives = 25/55 (45%)
Frame = +1
Query: 280 TPSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRALSMPTTTLALSIITGQSTT 444
T S +TT P P+T + +T TP+ + +T+ + + T STT
Sbjct: 586 TTSTSSTTTQKPSTTTTVPSTTPTSTTTTTTTTPKPTTSTSTSTSTTTTTTTSTT 640
>U28739-9|AAB93451.1| 480|Caenorhabditis elegans Hypothetical
protein C17G10.1 protein.
Length = 480
Score = 27.1 bits (57), Expect = 7.0
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +2
Query: 14 RHSTSARPRHHTTLFNYDRYLTEYEHDIDRQNVQNTFRHDWQKRDAVEES 163
R S P H + + D++ TE++ ++ N F H WQ R+ V+ S
Sbjct: 22 RRSVVLEPIHISPKYLEDKFKTEFKKGFEKSN--GPFPH-WQLRNFVDNS 68
>AC024817-16|AAF59585.2| 610|Caenorhabditis elegans Hypothetical
protein Y54G2A.13 protein.
Length = 610
Score = 27.1 bits (57), Expect = 7.0
Identities = 22/79 (27%), Positives = 33/79 (41%)
Frame = +1
Query: 208 TSEPRKGTGQHAAAFFPNSCRPTLTPSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRA 387
T P ++ S PT T TTTL + +T S ++ST TP A
Sbjct: 199 TQNPTTSNQKNETTDEATSSPPTTTTP--TTTLKPTTSPQKPDSTEEATSPSQSTTTPVA 256
Query: 388 LSMPTTTLALSIITGQSTT 444
PTT+ + T ++T+
Sbjct: 257 TQNPTTSNQKNETTDEATS 275
>Z73906-7|CAA98119.2| 428|Caenorhabditis elegans Hypothetical
protein D2030.7 protein.
Length = 428
Score = 26.6 bits (56), Expect = 9.2
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +1
Query: 301 TLSLPLRGLRYPATVTCLSIARSTATPRALSMPT 402
T SL L L +TVT SI++S TPR P+
Sbjct: 279 TASLNLSMLSQRSTVTSSSISQSIPTPRGRDTPS 312
>AF039047-13|AAM15587.1| 402|Caenorhabditis elegans Coexpressed
with polycystins protein4 protein.
Length = 402
Score = 26.6 bits (56), Expect = 9.2
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +1
Query: 304 LSLPLRGLRYPATVTCLSIARSTATPRALSMPTTTLALSIITGQSTT 444
+ LPL L P T T + +T T ++ TTT+ +I G +TT
Sbjct: 175 MGLPLCYLWVPLTTTTTTTTTTTTTTSPMNTTTTTV---LINGTTTT 218
>AF039038-1|AAK21435.1| 877|Caenorhabditis elegans Hypothetical
protein K06A5.4 protein.
Length = 877
Score = 26.6 bits (56), Expect = 9.2
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 5/47 (10%)
Frame = +2
Query: 20 STSARPRHHTTL---FNYDRYLTEYEHDIDRQNVQN-TF-RHDWQKR 145
S S PRH ++ + RY YEHD R + N T+ RH+ + R
Sbjct: 355 SPSPEPRHRSSSRDGYEQSRYSQRYEHDNSRWSRHNATYRRHEDESR 401
>AF038612-3|AAB92045.2| 432|Caenorhabditis elegans Hypothetical
protein F13B6.3 protein.
Length = 432
Score = 26.6 bits (56), Expect = 9.2
Identities = 20/60 (33%), Positives = 29/60 (48%)
Frame = +1
Query: 223 KGTGQHAAAFFPNSCRPTLTPSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRALSMPT 402
K TGQ AA + T TP+ TTT S L+ A++ + + TA P ++PT
Sbjct: 249 KLTGQLAAETVTTT---TETPTTVTTTTSGSSSFLQLDASIPSVGSIKITAGPNKCTIPT 305
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,901,575
Number of Sequences: 27780
Number of extensions: 237415
Number of successful extensions: 954
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 812
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 926
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 871571276
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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