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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0224
         (714 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U15129-1|AAB60240.1|  225|Caenorhabditis elegans protein-L-isoas...   224   6e-59
U09669-1|AAA82166.1|  225|Caenorhabditis elegans protein-L-isoas...   224   6e-59
AF022968-2|AAB69887.1|  225|Caenorhabditis elegans Protein carbo...   224   6e-59
AF022968-1|ABR92613.1|  219|Caenorhabditis elegans Protein carbo...   203   1e-52
AF063007-7|AAC16428.1|  659|Caenorhabditis elegans Hypothetical ...    45   6e-05
AL023828-21|CAA19466.1|  381|Caenorhabditis elegans Hypothetical...    34   0.088
AL023828-20|CAA19465.1|  378|Caenorhabditis elegans Hypothetical...    34   0.088
AF067607-8|AAF98614.1|  144|Caenorhabditis elegans Hypothetical ...    33   0.27 
Z66500-9|CAA91307.1|  672|Caenorhabditis elegans Hypothetical pr...    31   0.82 
Z69718-3|CAA93538.1|  365|Caenorhabditis elegans Hypothetical pr...    30   1.4  
Z46241-7|CAA86320.1|  214|Caenorhabditis elegans Hypothetical pr...    30   1.4  
Z46381-5|CAD92392.1|  328|Caenorhabditis elegans Hypothetical pr...    29   2.5  
Z75554-4|CAA99957.2|  534|Caenorhabditis elegans Hypothetical pr...    29   3.3  
AF125959-4|AAD14730.2|  532|Caenorhabditis elegans Udp-glucurono...    29   3.3  
AF067609-11|AAC17532.2|  252|Caenorhabditis elegans Hypothetical...    29   3.3  
U80030-12|AAG24159.1|  391|Caenorhabditis elegans Hypothetical p...    29   4.4  
U97009-13|AAZ94736.1|  456|Caenorhabditis elegans Udp-glucuronos...    28   5.8  
U97009-12|ABR92602.1|  532|Caenorhabditis elegans Udp-glucuronos...    28   5.8  
U97009-11|AAC69026.1|  533|Caenorhabditis elegans Udp-glucuronos...    28   5.8  
U97009-10|AAC69033.1|  533|Caenorhabditis elegans Udp-glucuronos...    28   5.8  
U28739-8|AAB93452.2|  419|Caenorhabditis elegans Hypothetical pr...    28   5.8  
U97009-8|AAC69032.1|  534|Caenorhabditis elegans Udp-glucuronosy...    28   7.6  
AF125959-1|AAD14733.1|  475|Caenorhabditis elegans Hypothetical ...    28   7.6  
AF000191-4|AAB52881.2|  362|Caenorhabditis elegans Hypothetical ...    28   7.6  

>U15129-1|AAB60240.1|  225|Caenorhabditis elegans
           protein-L-isoaspartate (D-aspartate)O-methyltransferase
           protein.
          Length = 225

 Score =  224 bits (547), Expect = 6e-59
 Identities = 104/190 (54%), Positives = 137/190 (72%)
 Frame = +1

Query: 145 MAWRSHGANNVDLIRNLRTNGIIKSDTVANAMLAVDRKNYCPSSPYQDSPQSIGFSATIS 324
           MAWRS G+ N +LI NLR N +  S    +AM +VDR ++ P +PY+D+PQ IG++AT+S
Sbjct: 1   MAWRSSGSTNSELIDNLRNNRVFASQRAYDAMKSVDRGDFAPRAPYEDAPQRIGYNATVS 60

Query: 325 APHMHAHALEKLKNQLVPGEKALDVGSGSGYLTACMAMMLGETGRVVGIEHISELVNLAT 504
           APHMHA AL+ L+N LV G KALDVGSGSGYLT CMAMM+G  G VVGIEH+ +LV L+ 
Sbjct: 61  APHMHAAALDYLQNHLVAGAKALDVGSGSGYLTVCMAMMVGRNGTVVGIEHMPQLVELSE 120

Query: 505 KNIQNDNPSLLSSERIKLVVGDGRLGYPSEAPYSAIHVGAAAPTLPQALIDQLKPGGRLI 684
           KNI+  +   L    + ++ GDGR G+  +APY+AIHVGAA+  +P+AL DQL  GGR++
Sbjct: 121 KNIRKHHSEQLERGNVIIIEGDGRQGFAEKAPYNAIHVGAASKGVPKALTDQLAEGGRMM 180

Query: 685 VPVGPEGGEQ 714
           +PV    G Q
Sbjct: 181 IPVEQVDGNQ 190


>U09669-1|AAA82166.1|  225|Caenorhabditis elegans
           protein-L-isoaspartate (D-aspartate)O-methyltransferase
           protein.
          Length = 225

 Score =  224 bits (547), Expect = 6e-59
 Identities = 104/190 (54%), Positives = 137/190 (72%)
 Frame = +1

Query: 145 MAWRSHGANNVDLIRNLRTNGIIKSDTVANAMLAVDRKNYCPSSPYQDSPQSIGFSATIS 324
           MAWRS G+ N +LI NLR N +  S    +AM +VDR ++ P +PY+D+PQ IG++AT+S
Sbjct: 1   MAWRSSGSTNSELIDNLRNNRVFASQRAYDAMKSVDRGDFAPRAPYEDAPQRIGYNATVS 60

Query: 325 APHMHAHALEKLKNQLVPGEKALDVGSGSGYLTACMAMMLGETGRVVGIEHISELVNLAT 504
           APHMHA AL+ L+N LV G KALDVGSGSGYLT CMAMM+G  G VVGIEH+ +LV L+ 
Sbjct: 61  APHMHAAALDYLQNHLVAGAKALDVGSGSGYLTVCMAMMVGRNGTVVGIEHMPQLVELSE 120

Query: 505 KNIQNDNPSLLSSERIKLVVGDGRLGYPSEAPYSAIHVGAAAPTLPQALIDQLKPGGRLI 684
           KNI+  +   L    + ++ GDGR G+  +APY+AIHVGAA+  +P+AL DQL  GGR++
Sbjct: 121 KNIRKHHSEQLERGNVIIIEGDGRQGFAEKAPYNAIHVGAASKGVPKALTDQLAEGGRMM 180

Query: 685 VPVGPEGGEQ 714
           +PV    G Q
Sbjct: 181 IPVEQVDGNQ 190


>AF022968-2|AAB69887.1|  225|Caenorhabditis elegans Protein
           carboxymethyltransferaseprotein 1, isoform a protein.
          Length = 225

 Score =  224 bits (547), Expect = 6e-59
 Identities = 104/190 (54%), Positives = 137/190 (72%)
 Frame = +1

Query: 145 MAWRSHGANNVDLIRNLRTNGIIKSDTVANAMLAVDRKNYCPSSPYQDSPQSIGFSATIS 324
           MAWRS G+ N +LI NLR N +  S    +AM +VDR ++ P +PY+D+PQ IG++AT+S
Sbjct: 1   MAWRSSGSTNSELIDNLRNNRVFASQRAYDAMKSVDRGDFAPRAPYEDAPQRIGYNATVS 60

Query: 325 APHMHAHALEKLKNQLVPGEKALDVGSGSGYLTACMAMMLGETGRVVGIEHISELVNLAT 504
           APHMHA AL+ L+N LV G KALDVGSGSGYLT CMAMM+G  G VVGIEH+ +LV L+ 
Sbjct: 61  APHMHAAALDYLQNHLVAGAKALDVGSGSGYLTVCMAMMVGRNGTVVGIEHMPQLVELSE 120

Query: 505 KNIQNDNPSLLSSERIKLVVGDGRLGYPSEAPYSAIHVGAAAPTLPQALIDQLKPGGRLI 684
           KNI+  +   L    + ++ GDGR G+  +APY+AIHVGAA+  +P+AL DQL  GGR++
Sbjct: 121 KNIRKHHSEQLERGNVIIIEGDGRQGFAEKAPYNAIHVGAASKGVPKALTDQLAEGGRMM 180

Query: 685 VPVGPEGGEQ 714
           +PV    G Q
Sbjct: 181 IPVEQVDGNQ 190


>AF022968-1|ABR92613.1|  219|Caenorhabditis elegans Protein
           carboxymethyltransferaseprotein 1, isoform b protein.
          Length = 219

 Score =  203 bits (495), Expect = 1e-52
 Identities = 99/190 (52%), Positives = 131/190 (68%)
 Frame = +1

Query: 145 MAWRSHGANNVDLIRNLRTNGIIKSDTVANAMLAVDRKNYCPSSPYQDSPQSIGFSATIS 324
           MAWRS G+ N +LI NLR N +  S    +AM +VDR ++ P +PY+D+PQ IG++AT  
Sbjct: 1   MAWRSSGSTNSELIDNLRNNRVFASQRAYDAMKSVDRGDFAPRAPYEDAPQRIGYNAT-- 58

Query: 325 APHMHAHALEKLKNQLVPGEKALDVGSGSGYLTACMAMMLGETGRVVGIEHISELVNLAT 504
               HA AL+ L+N LV G KALDVGSGSGYLT CMAMM+G  G VVGIEH+ +LV L+ 
Sbjct: 59  ----HAAALDYLQNHLVAGAKALDVGSGSGYLTVCMAMMVGRNGTVVGIEHMPQLVELSE 114

Query: 505 KNIQNDNPSLLSSERIKLVVGDGRLGYPSEAPYSAIHVGAAAPTLPQALIDQLKPGGRLI 684
           KNI+  +   L    + ++ GDGR G+  +APY+AIHVGAA+  +P+AL DQL  GGR++
Sbjct: 115 KNIRKHHSEQLERGNVIIIEGDGRQGFAEKAPYNAIHVGAASKGVPKALTDQLAEGGRMM 174

Query: 685 VPVGPEGGEQ 714
           +PV    G Q
Sbjct: 175 IPVEQVDGNQ 184


>AF063007-7|AAC16428.1|  659|Caenorhabditis elegans Hypothetical
           protein R119.5 protein.
          Length = 659

 Score = 44.8 bits (101), Expect = 6e-05
 Identities = 54/195 (27%), Positives = 82/195 (42%), Gaps = 20/195 (10%)
 Frame = +1

Query: 166 ANNVDLIRNLRTNGIIKSDTVANAMLAVDRKNYCPSS-------PYQDSPQSIG----FS 312
           + N DLI  L  N  I+   +  A   VDR ++ P S       P   S +  G     +
Sbjct: 6   SQNDDLIDFLVKNDTIRRRNIERAFRLVDRSDFLPISERKFTRLPSLTSTEPGGPFYPGA 65

Query: 313 ATISAPHMHAHALEKLKNQLVPGEKALDVGSGSGYLTACMAMMLGETGRVVGIEHISELV 492
             + A  ++A   + L   L  G   L +G+GSGYL+    ++LGETG   GIE    LV
Sbjct: 66  LRVGAIDIYAKLFDYL--DLRKGHSFLHIGTGSGYLSTIAGILLGETGINHGIELYENLV 123

Query: 493 NLATKNIQN--DNPSLLS----SERIKLV-VGDGRLGYPSEAPYSAIHVGAAA--PTLPQ 645
             +   I      P   S       +K+  + D +     +  Y  I VG  A    L +
Sbjct: 124 TYSETCIDQWITTPEASSVGWARPELKVCDITDVKFLEAHQNRYDRIFVGFVADDSQLLK 183

Query: 646 ALIDQLKPGGRLIVP 690
            ++  L  GG+L++P
Sbjct: 184 RMLGMLNVGGQLVMP 198


>AL023828-21|CAA19466.1|  381|Caenorhabditis elegans Hypothetical
           protein Y17G7B.18b protein.
          Length = 381

 Score = 34.3 bits (75), Expect = 0.088
 Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
 Frame = +1

Query: 382 EKALDVGSGSGYLTACMAMMLGETGRVVGIEHISELVNLATKNIQN--DNPSLLSSE-RI 552
           ++ALD+G  +G+LT  +A       R++GI+    L+ +A KNI++  D+ + +S +   
Sbjct: 153 KQALDIGCNAGFLTLSIAKDFSPR-RIIGIDIDEHLIGVARKNIRHYCDHETEVSGKFPA 211

Query: 553 KLVVGDGRLGYPSEAPYS 606
              V  G +   +EAP S
Sbjct: 212 SFGVQFGTVSQRNEAPRS 229


>AL023828-20|CAA19465.1|  378|Caenorhabditis elegans Hypothetical
           protein Y17G7B.18a protein.
          Length = 378

 Score = 34.3 bits (75), Expect = 0.088
 Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
 Frame = +1

Query: 382 EKALDVGSGSGYLTACMAMMLGETGRVVGIEHISELVNLATKNIQN--DNPSLLSSE-RI 552
           ++ALD+G  +G+LT  +A       R++GI+    L+ +A KNI++  D+ + +S +   
Sbjct: 150 KQALDIGCNAGFLTLSIAKDFSPR-RIIGIDIDEHLIGVARKNIRHYCDHETEVSGKFPA 208

Query: 553 KLVVGDGRLGYPSEAPYS 606
              V  G +   +EAP S
Sbjct: 209 SFGVQFGTVSQRNEAPRS 226


>AF067607-8|AAF98614.1|  144|Caenorhabditis elegans Hypothetical
           protein C18H7.9 protein.
          Length = 144

 Score = 32.7 bits (71), Expect = 0.27
 Identities = 21/74 (28%), Positives = 35/74 (47%)
 Frame = +1

Query: 271 SSPYQDSPQSIGFSATISAPHMHAHALEKLKNQLVPGEKALDVGSGSGYLTACMAMMLGE 450
           SS +   P S      +   H+    LEKL    +  +K LD+G G+G L +   +  G 
Sbjct: 2   SSDFPTDPYSTAQQKWLYQDHLVLPTLEKLLKYNLKDKKVLDIGCGNG-LNSTTFLQWG- 59

Query: 451 TGRVVGIEHISELV 492
             +VVG ++  E++
Sbjct: 60  ARKVVGFDNSQEMI 73


>Z66500-9|CAA91307.1|  672|Caenorhabditis elegans Hypothetical
           protein T05C12.6a protein.
          Length = 672

 Score = 31.1 bits (67), Expect = 0.82
 Identities = 23/80 (28%), Positives = 34/80 (42%)
 Frame = +1

Query: 418 LTACMAMMLGETGRVVGIEHISELVNLATKNIQNDNPSLLSSERIKLVVGDGRLGYPSEA 597
           +T   A M+GE+   +G+  +       TKN     P+        L  G G LG P   
Sbjct: 577 MTNDYASMVGESQ--IGMNPVGNYHVFGTKNNHRQVPAPSQVTSSSLTNGSGGLGGPPPT 634

Query: 598 PYSAIHVGAAAPTLPQALID 657
           P S+  V AA+P   Q  ++
Sbjct: 635 PLSSTMVLAASPIQSQNAVN 654


>Z69718-3|CAA93538.1|  365|Caenorhabditis elegans Hypothetical
           protein W06D11.4 protein.
          Length = 365

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
 Frame = +1

Query: 334 MHAHALEKLKNQLV--PGEKALDVGSGSGYLTACMAMMLGETGRVVGIEHISELVNLATK 507
           +H   +    +QL   P +  +D+GSG G+L   +A     T   VG+E +  L  +A K
Sbjct: 172 LHCSQMASFVDQLNMGPSDYFMDLGSGIGHLVNFVA-AYARTQMSVGVELMDNLAEIAEK 230

Query: 508 N 510
           N
Sbjct: 231 N 231


>Z46241-7|CAA86320.1|  214|Caenorhabditis elegans Hypothetical
           protein C38D4.9 protein.
          Length = 214

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 14/46 (30%), Positives = 26/46 (56%)
 Frame = +1

Query: 379 GEKALDVGSGSGYLTACMAMMLGETGRVVGIEHISELVNLATKNIQ 516
           G+K +D+G G G L    A M  E   V+G++   E + + ++N++
Sbjct: 48  GKKLIDIGCGCGMLMTTAATMY-ELETVLGVDIDDEALKICSRNLE 92


>Z46381-5|CAD92392.1|  328|Caenorhabditis elegans Hypothetical
           protein M01F1.8a protein.
          Length = 328

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
 Frame = -2

Query: 515 WMFLVAKFTSSD--ICSIPT-TRPVSPNIMAIQAVR*PDPEPTSKAFSPG 375
           +MF+  K+T +   +  IP  T+P++ N+   +A   PD E  ++ F PG
Sbjct: 103 YMFVDWKYTKNPPTLAKIPGYTKPLTTNVFVTRATVRPDVEKLTEMFKPG 152


>Z75554-4|CAA99957.2|  534|Caenorhabditis elegans Hypothetical
           protein ZC455.6a protein.
          Length = 534

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 19/46 (41%), Positives = 27/46 (58%)
 Frame = +1

Query: 472 EHISELVNLATKNIQNDNPSLLSSERIKLVVGDGRLGYPSEAPYSA 609
           E+I + V+L+T   Q    SLL+ +R+KL +  G LG   E  YSA
Sbjct: 351 ENIPDNVHLSTWFPQQ---SLLADKRVKLFITHGGLGSTMELAYSA 393


>AF125959-4|AAD14730.2|  532|Caenorhabditis elegans
           Udp-glucuronosyltransferase protein13 protein.
          Length = 532

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = +1

Query: 526 PSLLSSERIKLVVGDGRLGYPSEAPYS 606
           PSLL+ +R+KL V  G LG  +E  Y+
Sbjct: 364 PSLLADKRVKLFVTHGGLGSTTEVAYT 390


>AF067609-11|AAC17532.2|  252|Caenorhabditis elegans Hypothetical
           protein C23H5.1 protein.
          Length = 252

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 17/86 (19%), Positives = 40/86 (46%)
 Frame = +1

Query: 268 PSSPYQDSPQSIGFSATISAPHMHAHALEKLKNQLVPGEKALDVGSGSGYLTACMAMMLG 447
           PS  Y ++ Q       +   H+    ++K    ++ G++ LDVG G+G+ +     +  
Sbjct: 5   PSEAYTEAQQK-----WLGRDHLITPTIKKAFGHILVGKEVLDVGCGNGHYS--FDFLRW 57

Query: 448 ETGRVVGIEHISELVNLATKNIQNDN 525
              +V G+++  E++ +   +   +N
Sbjct: 58  GAHKVFGVDNSEEMIQICKSSPDFEN 83


>U80030-12|AAG24159.1|  391|Caenorhabditis elegans Hypothetical
           protein K12D9.1 protein.
          Length = 391

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 17/67 (25%), Positives = 34/67 (50%)
 Frame = +1

Query: 379 GEKALDVGSGSGYLTACMAMMLGETGRVVGIEHISELVNLATKNIQNDNPSLLSSERIKL 558
           G + LDVG G G+ +  +A    ++ + VG++   + +  A  N ++D       + ++ 
Sbjct: 203 GFRVLDVGCGEGFHSCLLAENYSKS-QFVGLDICEKAIKSAKLNKKSDGSDF---QNLEF 258

Query: 559 VVGDGRL 579
           VVGD  +
Sbjct: 259 VVGDAMI 265


>U97009-13|AAZ94736.1|  456|Caenorhabditis elegans
           Udp-glucuronosyltransferase protein10 protein.
          Length = 456

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +1

Query: 526 PSLLSSERIKLVVGDGRLGYPSEAPYS 606
           PSLL+ +R+KL V  G LG   E  Y+
Sbjct: 286 PSLLADKRVKLFVTHGGLGSTMEVAYT 312


>U97009-12|ABR92602.1|  532|Caenorhabditis elegans
           Udp-glucuronosyltransferase protein9, isoform b protein.
          Length = 532

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +1

Query: 526 PSLLSSERIKLVVGDGRLGYPSEAPYS 606
           PSLL+ +R+KL V  G LG   E  Y+
Sbjct: 364 PSLLADKRVKLFVTHGGLGSTMEVAYT 390


>U97009-11|AAC69026.1|  533|Caenorhabditis elegans
           Udp-glucuronosyltransferase protein9, isoform a protein.
          Length = 533

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +1

Query: 526 PSLLSSERIKLVVGDGRLGYPSEAPYS 606
           PSLL+ +R+KL V  G LG   E  Y+
Sbjct: 365 PSLLADKRVKLFVTHGGLGSTMEVAYT 391


>U97009-10|AAC69033.1|  533|Caenorhabditis elegans
           Udp-glucuronosyltransferase protein11 protein.
          Length = 533

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +1

Query: 526 PSLLSSERIKLVVGDGRLGYPSEAPYS 606
           PSLL+ +R+KL V  G LG   E  Y+
Sbjct: 365 PSLLADKRVKLFVTHGGLGSTMEVAYT 391


>U28739-8|AAB93452.2|  419|Caenorhabditis elegans Hypothetical
           protein C17G10.2 protein.
          Length = 419

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
 Frame = +1

Query: 259 NYCPSSPYQDSPQSIGFSA-TISAPHMHAHALEKLKNQL 372
           N CP  P+ D P+ +  +  T+S P MH+H   K  + L
Sbjct: 265 NLCPRVPF-DRPELMDMARLTVSLPLMHSHECVKFDDDL 302


>U97009-8|AAC69032.1|  534|Caenorhabditis elegans
           Udp-glucuronosyltransferase protein12 protein.
          Length = 534

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +1

Query: 526 PSLLSSERIKLVVGDGRLGYPSEAPYS 606
           PSLL+ +R+KL +  G LG   E  Y+
Sbjct: 366 PSLLADKRVKLFITHGGLGSTMEVAYT 392


>AF125959-1|AAD14733.1|  475|Caenorhabditis elegans Hypothetical
           protein H23N18.4 protein.
          Length = 475

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +1

Query: 526 PSLLSSERIKLVVGDGRLGYPSEAPYS 606
           PSLL+ +R+KL V  G LG   E  Y+
Sbjct: 365 PSLLADKRLKLFVTHGGLGSTMEVAYT 391


>AF000191-4|AAB52881.2|  362|Caenorhabditis elegans Hypothetical
           protein T23C6.5 protein.
          Length = 362

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 10/36 (27%), Positives = 19/36 (52%)
 Frame = +3

Query: 267 SFFSIPGLSSIYWILCNNQRSPHACSCIRKVKKPAS 374
           +FFS+P      W +  +  +P   +C++ V +P S
Sbjct: 262 AFFSLPRYVYFMWTVWRDPMAPRCLNCLQSVLQPIS 297


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,505,789
Number of Sequences: 27780
Number of extensions: 354312
Number of successful extensions: 868
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 846
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 864
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1666201324
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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