Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0222
(580 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC106938-1|AAI06939.1| 576|Homo sapiens zinc finger protein 791... 31 3.9
BC106937-1|AAI06938.1| 576|Homo sapiens zinc finger protein 791... 31 3.9
BC031682-1|AAH31682.1| 450|Homo sapiens RBM42 protein protein. 31 3.9
BC004204-1|AAH04204.1| 480|Homo sapiens hypothetical protein MG... 31 3.9
BC002868-1|AAH02868.1| 451|Homo sapiens MGC10433 protein protein. 31 3.9
AK074877-1|BAC11261.1| 576|Homo sapiens essor-4. protein. 31 3.9
AC002115-1|AAB57629.1| 339|Homo sapiens F25451_2 protein. 31 3.9
X68968-1|CAA48770.1| 2339|Homo sapiens acetyl-CoA carboxylase p... 29 9.0
U89344-1|AAB58382.1| 2483|Homo sapiens acetyl-CoA carboxylase pr... 29 9.0
U34591-1|AAC50571.1| 786|Homo sapiens acetyl-CoA carboxylase be... 29 9.0
DQ493870-1|ABF48723.1| 2458|Homo sapiens acetyl-Coenzyme A carbo... 29 9.0
BC028417-1|AAH28417.1| 858|Homo sapiens ACACB protein protein. 29 9.0
AY382667-1|AAR37018.1| 2458|Homo sapiens acetyl-CoA carboxylase ... 29 9.0
AJ575592-1|CAE01471.3| 2458|Homo sapiens Acetyl-CoA carboxylase ... 29 9.0
AB209110-1|BAD92347.1| 1689|Homo sapiens Acetyl-CoA carboxylase ... 29 9.0
>BC106938-1|AAI06939.1| 576|Homo sapiens zinc finger protein 791
protein.
Length = 576
Score = 30.7 bits (66), Expect = 3.9
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = -2
Query: 462 LSI*NEAGSIKYLNIAVFTKSPVKLLTITRIYRSNTQLELSQTPLVAREC 313
LS+ + +K + K+ ++L ++TR RS+T EL + P +EC
Sbjct: 88 LSVTKKTAGVKPYECTICGKAFMRLSSLTRHMRSHTGYELFEKPYKCKEC 137
>BC106937-1|AAI06938.1| 576|Homo sapiens zinc finger protein 791
protein.
Length = 576
Score = 30.7 bits (66), Expect = 3.9
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = -2
Query: 462 LSI*NEAGSIKYLNIAVFTKSPVKLLTITRIYRSNTQLELSQTPLVAREC 313
LS+ + +K + K+ ++L ++TR RS+T EL + P +EC
Sbjct: 88 LSVTKKTAGVKPYECTICGKAFMRLSSLTRHMRSHTGYELFEKPYKCKEC 137
>BC031682-1|AAH31682.1| 450|Homo sapiens RBM42 protein protein.
Length = 450
Score = 30.7 bits (66), Expect = 3.9
Identities = 12/34 (35%), Positives = 23/34 (67%)
Frame = +3
Query: 441 QLHFKYLGGRPVRL*GSRWGSRSLCLVRVFERSR 542
+++ KY+G RP++L S W R+L +VR ++ +
Sbjct: 411 EMNGKYVGSRPIKLRKSMWKDRNLDVVRKKQKEK 444
>BC004204-1|AAH04204.1| 480|Homo sapiens hypothetical protein
MGC10433 protein.
Length = 480
Score = 30.7 bits (66), Expect = 3.9
Identities = 12/34 (35%), Positives = 23/34 (67%)
Frame = +3
Query: 441 QLHFKYLGGRPVRL*GSRWGSRSLCLVRVFERSR 542
+++ KY+G RP++L S W R+L +VR ++ +
Sbjct: 441 EMNGKYVGSRPIKLRKSMWKDRNLDVVRKKQKEK 474
>BC002868-1|AAH02868.1| 451|Homo sapiens MGC10433 protein protein.
Length = 451
Score = 30.7 bits (66), Expect = 3.9
Identities = 12/34 (35%), Positives = 23/34 (67%)
Frame = +3
Query: 441 QLHFKYLGGRPVRL*GSRWGSRSLCLVRVFERSR 542
+++ KY+G RP++L S W R+L +VR ++ +
Sbjct: 412 EMNGKYVGSRPIKLRKSMWKDRNLDVVRKKQKEK 445
>AK074877-1|BAC11261.1| 576|Homo sapiens essor-4. protein.
Length = 576
Score = 30.7 bits (66), Expect = 3.9
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = -2
Query: 462 LSI*NEAGSIKYLNIAVFTKSPVKLLTITRIYRSNTQLELSQTPLVAREC 313
LS+ + +K + K+ ++L ++TR RS+T EL + P +EC
Sbjct: 88 LSVTKKTAGVKPYECTICGKAFMRLSSLTRHMRSHTGYELFEKPYKCKEC 137
>AC002115-1|AAB57629.1| 339|Homo sapiens F25451_2 protein.
Length = 339
Score = 30.7 bits (66), Expect = 3.9
Identities = 12/34 (35%), Positives = 23/34 (67%)
Frame = +3
Query: 441 QLHFKYLGGRPVRL*GSRWGSRSLCLVRVFERSR 542
+++ KY+G RP++L S W R+L +VR ++ +
Sbjct: 300 EMNGKYVGSRPIKLRKSMWKDRNLDVVRKKQKEK 333
>X68968-1|CAA48770.1| 2339|Homo sapiens acetyl-CoA carboxylase
protein.
Length = 2339
Score = 29.5 bits (63), Expect = 9.0
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 4/37 (10%)
Frame = -1
Query: 499 PHRLPYSR----TGRPPKYLK*SWVHKIFEHSSFHEV 401
P R PY GRP LK +W F+H SF E+
Sbjct: 1919 PSRAPYDPRWMLAGRPHPTLKGTWQSGFFDHGSFKEI 1955
>U89344-1|AAB58382.1| 2483|Homo sapiens acetyl-CoA carboxylase
protein.
Length = 2483
Score = 29.5 bits (63), Expect = 9.0
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 4/37 (10%)
Frame = -1
Query: 499 PHRLPYSR----TGRPPKYLK*SWVHKIFEHSSFHEV 401
P R PY GRP LK +W F+H SF E+
Sbjct: 2063 PSRAPYDPRWMLAGRPHPTLKGTWQSGFFDHGSFKEI 2099
>U34591-1|AAC50571.1| 786|Homo sapiens acetyl-CoA carboxylase beta
protein.
Length = 786
Score = 29.5 bits (63), Expect = 9.0
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 4/37 (10%)
Frame = -1
Query: 499 PHRLPYSR----TGRPPKYLK*SWVHKIFEHSSFHEV 401
P R PY GRP LK +W F+H SF E+
Sbjct: 715 PSRAPYDPRWMLAGRPHPTLKGTWQSGFFDHGSFKEI 751
>DQ493870-1|ABF48723.1| 2458|Homo sapiens acetyl-Coenzyme A
carboxylase 2 protein.
Length = 2458
Score = 29.5 bits (63), Expect = 9.0
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 4/37 (10%)
Frame = -1
Query: 499 PHRLPYSR----TGRPPKYLK*SWVHKIFEHSSFHEV 401
P R PY GRP LK +W F+H SF E+
Sbjct: 2038 PSRAPYDPRWMLAGRPHPTLKGTWQSGFFDHGSFKEI 2074
>BC028417-1|AAH28417.1| 858|Homo sapiens ACACB protein protein.
Length = 858
Score = 29.5 bits (63), Expect = 9.0
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 4/37 (10%)
Frame = -1
Query: 499 PHRLPYSR----TGRPPKYLK*SWVHKIFEHSSFHEV 401
P R PY GRP LK +W F+H SF E+
Sbjct: 704 PSRAPYDPRWMLAGRPHPTLKGTWQSGFFDHGSFKEI 740
>AY382667-1|AAR37018.1| 2458|Homo sapiens acetyl-CoA carboxylase 2
protein.
Length = 2458
Score = 29.5 bits (63), Expect = 9.0
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 4/37 (10%)
Frame = -1
Query: 499 PHRLPYSR----TGRPPKYLK*SWVHKIFEHSSFHEV 401
P R PY GRP LK +W F+H SF E+
Sbjct: 2038 PSRAPYDPRWMLAGRPHPTLKGTWQSGFFDHGSFKEI 2074
>AJ575592-1|CAE01471.3| 2458|Homo sapiens Acetyl-CoA carboxylase 2
protein.
Length = 2458
Score = 29.5 bits (63), Expect = 9.0
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 4/37 (10%)
Frame = -1
Query: 499 PHRLPYSR----TGRPPKYLK*SWVHKIFEHSSFHEV 401
P R PY GRP LK +W F+H SF E+
Sbjct: 2038 PSRAPYDPRWMLAGRPHPTLKGTWQSGFFDHGSFKEI 2074
>AB209110-1|BAD92347.1| 1689|Homo sapiens Acetyl-CoA carboxylase 2
variant protein.
Length = 1689
Score = 29.5 bits (63), Expect = 9.0
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 4/37 (10%)
Frame = -1
Query: 499 PHRLPYSR----TGRPPKYLK*SWVHKIFEHSSFHEV 401
P R PY GRP LK +W F+H SF E+
Sbjct: 1269 PSRAPYDPRWMLAGRPHPTLKGTWQSGFFDHGSFKEI 1305
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,865,213
Number of Sequences: 237096
Number of extensions: 1469045
Number of successful extensions: 2663
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2495
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2663
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5985693436
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -