Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0219
         (459 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5C0A4 Cluster: SJCHGC09205 protein; n=1; Schistosoma j...    36   0.42 
UniRef50_Q7SFF7 Cluster: Predicted protein; n=1; Neurospora cras...    33   3.9  
UniRef50_Q0P6N7 Cluster: Plasma memebrane H+-ATPase; n=1; Planta...    32   6.8  
UniRef50_Q589S4 Cluster: HMG protein TCF/LEF; n=1; Dugesia japon...    32   6.8  
UniRef50_A6P1F2 Cluster: Putative uncharacterized protein; n=1; ...    31   9.0  
UniRef50_A4TZM5 Cluster: Stage II sporulation E; n=3; Magnetospi...    31   9.0  
UniRef50_Q5CS95 Cluster: Putative uncharacterized protein; n=2; ...    31   9.0  

>UniRef50_Q5C0A4 Cluster: SJCHGC09205 protein; n=1; Schistosoma
          japonicum|Rep: SJCHGC09205 protein - Schistosoma
          japonicum (Blood fluke)
          Length = 215

 Score = 35.9 bits (79), Expect = 0.42
 Identities = 14/15 (93%), Positives = 15/15 (100%)
 Frame = +2

Query: 2  VDPPGCRNSARGSKE 46
          VDPPGCRNSARGS+E
Sbjct: 14 VDPPGCRNSARGSQE 28


>UniRef50_Q7SFF7 Cluster: Predicted protein; n=1; Neurospora
           crassa|Rep: Predicted protein - Neurospora crassa
          Length = 756

 Score = 32.7 bits (71), Expect = 3.9
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = -1

Query: 399 VPKQKPIISGEIITPRXRHNXNIIHLKASAFAVSLRCHP 283
           +P Q P I+G +I     H+ +I+HL  SAF    R  P
Sbjct: 574 LPGQLPSIAGHLIEVDDNHHVHILHLTTSAFLTQKRDEP 612


>UniRef50_Q0P6N7 Cluster: Plasma memebrane H+-ATPase; n=1;
          Plantago major|Rep: Plasma memebrane H+-ATPase -
          Plantago major (Common plantain)
          Length = 106

 Score = 31.9 bits (69), Expect = 6.8
 Identities = 12/12 (100%), Positives = 12/12 (100%)
 Frame = +2

Query: 2  VDPPGCRNSARG 37
          VDPPGCRNSARG
Sbjct: 14 VDPPGCRNSARG 25


>UniRef50_Q589S4 Cluster: HMG protein TCF/LEF; n=1; Dugesia
          japonica|Rep: HMG protein TCF/LEF - Dugesia japonica
          (Planarian)
          Length = 263

 Score = 31.9 bits (69), Expect = 6.8
 Identities = 12/12 (100%), Positives = 12/12 (100%)
 Frame = +2

Query: 2  VDPPGCRNSARG 37
          VDPPGCRNSARG
Sbjct: 7  VDPPGCRNSARG 18


>UniRef50_A6P1F2 Cluster: Putative uncharacterized protein; n=1;
           Bacteroides capillosus ATCC 29799|Rep: Putative
           uncharacterized protein - Bacteroides capillosus ATCC
           29799
          Length = 248

 Score = 31.5 bits (68), Expect = 9.0
 Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 5/75 (6%)
 Frame = -3

Query: 325 LKSFGLC-RFTSLP-PLNVP-LDLFEYVIFLHLLFLKRIAGSFESY--NLFVIVMQCSCH 161
           LK   +C + +S P P N+P +D +   I  +   +  + G++E Y  + FV++++CSC+
Sbjct: 57  LKVLDMCSKISSNPNPTNIPWIDEYNAEIIFNNCKIPFMVGAWERYLKSTFVVLLKCSCN 116

Query: 160 PAKNAKSKALDSVSL 116
             K  K K L  + +
Sbjct: 117 REKVFK-KLLSKIKI 130


>UniRef50_A4TZM5 Cluster: Stage II sporulation E; n=3;
           Magnetospirillum|Rep: Stage II sporulation E -
           Magnetospirillum gryphiswaldense
          Length = 572

 Score = 31.5 bits (68), Expect = 9.0
 Identities = 17/42 (40%), Positives = 24/42 (57%)
 Frame = -3

Query: 217 AGSFESYNLFVIVMQCSCHPAKNAKSKALDSVSLHRALNHYG 92
           AGSFES  + + VM C+ H    A   A+ + S  R L+H+G
Sbjct: 360 AGSFESKGV-IAVMDCTGHGVPGAFMTAVVASSFSRILHHHG 400


>UniRef50_Q5CS95 Cluster: Putative uncharacterized protein; n=2;
           Cryptosporidium|Rep: Putative uncharacterized protein -
           Cryptosporidium parvum Iowa II
          Length = 402

 Score = 31.5 bits (68), Expect = 9.0
 Identities = 14/49 (28%), Positives = 24/49 (48%)
 Frame = -3

Query: 337 KYYTLKSFGLCRFTSLPPLNVPLDLFEYVIFLHLLFLKRIAGSFESYNL 191
           +YY   SF + +   L  L +PLD F+++I +  L        F+ Y +
Sbjct: 2   RYYRENSFSMLKVLELRNLYIPLDTFDHLILMFSLSNNNSRYKFQGYEI 50


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 445,032,105
Number of Sequences: 1657284
Number of extensions: 7771748
Number of successful extensions: 14896
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 14620
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14894
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 24351434270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)