Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0219
         (459 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     26   0.19 
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    26   0.19 
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           26   0.19 
AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esteras...    22   3.2  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    21   5.5  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   5.5  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   7.3  

>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 25.8 bits (54), Expect = 0.19
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +3

Query: 243 KNITYSNRSNGTFRGGSEVKRQR 311
           + +  +  SNGTF  G E KRQR
Sbjct: 215 RKVHVAGASNGTFAPGMEPKRQR 237


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 25.8 bits (54), Expect = 0.19
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +3

Query: 243 KNITYSNRSNGTFRGGSEVKRQR 311
           + +  +  SNGTF  G E KRQR
Sbjct: 215 RKVHVAGASNGTFAPGMEPKRQR 237


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 25.8 bits (54), Expect = 0.19
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +3

Query: 243 KNITYSNRSNGTFRGGSEVKRQR 311
           + +  +  SNGTF  G E KRQR
Sbjct: 215 RKVHVAGASNGTFAPGMEPKRQR 237


>AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.8 bits (44), Expect = 3.2
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -2

Query: 251 NIFAFAVPKENCRFL 207
           N++   +PKE C FL
Sbjct: 86  NVYTRDLPKEGCNFL 100


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +3

Query: 252 TYSNRSNGTFRGGSEVKRQRPK 317
           TY++      R G+E+ + RPK
Sbjct: 235 TYTDDGKNQQRTGTELTKMRPK 256


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = -2

Query: 302 FHFAATPKCPIRSV*IRNIFAFAVPK 225
           FH    PK P+ ++   N+ +++VP+
Sbjct: 376 FHGLCGPKNPLINILYANMNSYSVPE 401


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 20.6 bits (41), Expect = 7.3
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -3

Query: 244 LHLLFLKRIAGSFESYNLFVIVMQCSC 164
           LHLLFL  I   + ++ +F I +   C
Sbjct: 204 LHLLFLPCIYYFYSAFIIFTIHLLFYC 230


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,394
Number of Sequences: 336
Number of extensions: 1954
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10511300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)