Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0219
         (459 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D29685-1|BAA06154.1|  704|Homo sapiens liver glycogen synthase p...    30   4.4  

>D29685-1|BAA06154.1|  704|Homo sapiens liver glycogen synthase
           protein.
          Length = 704

 Score = 29.9 bits (64), Expect = 4.4
 Identities = 13/45 (28%), Positives = 26/45 (57%)
 Frame = -3

Query: 220 IAGSFESYNLFVIVMQCSCHPAKNAKSKALDSVSLHRALNHYGRF 86
           + G +  +N+   V QC   P  +A  +A+D++++H    H+GR+
Sbjct: 65  LIGPYFEHNMKTQVEQCE--PVNDAVRRAVDAMNMHGCQVHFGRW 107


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,852,465
Number of Sequences: 237096
Number of extensions: 1182649
Number of successful extensions: 2121
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2072
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2119
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3872123864
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)