Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0218
(395 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 143 1e-33
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 121 6e-27
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 118 5e-26
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 107 6e-23
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 104 5e-22
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 104 7e-22
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 104 7e-22
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 103 1e-21
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 101 4e-21
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 99 4e-20
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 92 3e-18
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 91 5e-18
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 86 2e-16
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 86 2e-16
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 86 2e-16
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 85 6e-16
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 84 1e-15
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 81 6e-15
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 81 6e-15
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 79 2e-14
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 79 3e-14
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 78 7e-14
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 78 7e-14
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 77 2e-13
UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI... 73 3e-12
UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 72 5e-12
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 71 6e-12
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 70 1e-11
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 69 2e-11
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 69 2e-11
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 69 2e-11
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 69 2e-11
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 67 1e-10
UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia polym... 65 4e-10
UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia lipolyti... 63 2e-09
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 61 9e-09
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 60 1e-08
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 58 5e-08
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 58 6e-08
UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1; Kluyver... 57 1e-07
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 56 2e-07
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 53 2e-06
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 50 1e-05
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 50 1e-05
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 50 2e-05
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 48 5e-05
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 47 1e-04
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 46 3e-04
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 46 4e-04
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 46 4e-04
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 45 5e-04
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 44 8e-04
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 44 0.001
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 41 0.008
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 40 0.013
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 40 0.017
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 40 0.023
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 40 0.023
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 40 0.023
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 40 0.023
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 39 0.040
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 39 0.040
UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1; Pach... 38 0.053
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 38 0.071
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 38 0.071
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 38 0.071
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 37 0.12
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 37 0.12
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 36 0.22
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 36 0.22
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 36 0.38
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 36 0.38
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 35 0.50
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 34 0.87
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 34 1.1
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 33 1.5
UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My... 33 1.5
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 33 1.5
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 33 2.0
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 33 2.0
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 32 3.5
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 32 3.5
UniRef50_Q8ID15 Cluster: Putative uncharacterized protein MAL13P... 32 3.5
UniRef50_Q0BZ17 Cluster: Amidohydrolase family/endoribonuclease ... 32 4.6
UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2; Eu... 31 6.1
UniRef50_Q96L91 Cluster: E1A-binding protein p400; n=16; Amniota... 31 6.1
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 31 6.1
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 31 8.1
UniRef50_Q00639 Cluster: GEgh7 protein; n=1; Blumeria graminis|R... 31 8.1
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 143 bits (347), Expect = 1e-33
Identities = 75/124 (60%), Positives = 86/124 (69%)
Frame = -2
Query: 391 PLCAILDESGG*TVHPVPAPFSTILLEINNIREGGRSQNLILFIRGNAISGAPSIRGTNQ 212
P CAI SGG TVHPVP P STI L + ++EGG +QNL+LFIRGNA+SGAP++ GTNQ
Sbjct: 95 PACAIPLASGGYTVHPVPTPLSTIPLNKSKVKEGGSNQNLMLFIRGNAMSGAPNMSGTNQ 154
Query: 211 FPNPPXXXXXXXXXXXXKACAVTIVL*I*SSPINDPGFPNSARIKSLKDVPIIPDQIPKI 32
FPNPP KA AVT+ L I S PI PG PNSARIKSL DVP +P PK+
Sbjct: 155 FPNPPIMIGMTMKKIITKAWAVTMTL-IWSFPIKLPGCPNSARIKSLSDVPTMPAHAPKM 213
Query: 31 KYNV 20
KYNV
Sbjct: 214 KYNV 217
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 121 bits (291), Expect = 6e-27
Identities = 66/125 (52%), Positives = 70/125 (56%)
Frame = +3
Query: 18 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXX 197
GTLY AELG PGSLIGDDQIYNTIVTAHA
Sbjct: 13 GTLYFIFGIWAGMVGTSLSLLIRAELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMI 72
Query: 198 XXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSN 377
N LVPL+LGAPD+AFPR+NN+ F IVENGAGTG TVYPPLSSN
Sbjct: 73 GGFGNWLVPLMLGAPDMAFPRMNNMSFWLLPPSLTLLISSSIVENGAGTGWTVYPPLSSN 132
Query: 378 IAHRG 392
IAH G
Sbjct: 133 IAHGG 137
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 118 bits (283), Expect = 5e-26
Identities = 60/101 (59%), Positives = 65/101 (64%)
Frame = +3
Query: 90 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 269
ELG PGSLIGDDQIYNTIVTAHA N L+PL+LGAPD+AFPR+NN
Sbjct: 13 ELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLIPLMLGAPDMAFPRMNN 72
Query: 270 IRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRG 392
+ F IVENGAGTG TVYPPLSSNIAH G
Sbjct: 73 MSFWLLPPSLILLISSSIVENGAGTGWTVYPPLSSNIAHGG 113
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 107 bits (258), Expect = 6e-23
Identities = 58/125 (46%), Positives = 67/125 (53%)
Frame = +3
Query: 18 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXX 197
GTLY AELG PG+L+GDDQIYN IVTAHA
Sbjct: 17 GTLYLIFGAWAGMIGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMI 76
Query: 198 XXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSN 377
N LVPL++GAPD+AFPR+NN+ F VE GAGTG TVYPPL+ N
Sbjct: 77 GGFGNWLVPLMIGAPDMAFPRMNNMSFWLXPPSFLLLLASSTVEAGAGTGWTVYPPLAGN 136
Query: 378 IAHRG 392
+AH G
Sbjct: 137 LAHAG 141
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 104 bits (250), Expect = 5e-22
Identities = 52/101 (51%), Positives = 60/101 (59%)
Frame = +3
Query: 90 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 269
ELG PGS IG+DQ+YN +VTAHA N LVPL+LGAPD+AFPR+NN
Sbjct: 23 ELGQPGSFIGNDQLYNVVVTAHAFVMIFFLVMPMMIGGFGNWLVPLMLGAPDMAFPRLNN 82
Query: 270 IRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRG 392
+ F VE+GAGTG TVYPPLS N AH G
Sbjct: 83 MSFWFLPPSLSLLLMSAAVESGAGTGWTVYPPLSGNTAHAG 123
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 104 bits (249), Expect = 7e-22
Identities = 56/125 (44%), Positives = 65/125 (52%)
Frame = +3
Query: 18 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXX 197
GTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 16 GTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPVMI 75
Query: 198 XXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSN 377
N LVPL++GAPD+AFPR+NN+ F VE GAGTG TVYPPL+ N
Sbjct: 76 GGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGN 135
Query: 378 IAHRG 392
+AH G
Sbjct: 136 LAHAG 140
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 104 bits (249), Expect = 7e-22
Identities = 56/125 (44%), Positives = 65/125 (52%)
Frame = +3
Query: 18 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXX 197
GTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 16 GTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPILI 75
Query: 198 XXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSN 377
N LVPL++GAPD+AFPR+NN+ F VE GAGTG TVYPPL+ N
Sbjct: 76 GGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGN 135
Query: 378 IAHRG 392
+AH G
Sbjct: 136 LAHAG 140
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 103 bits (247), Expect = 1e-21
Identities = 54/125 (43%), Positives = 65/125 (52%)
Frame = +3
Query: 18 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXX 197
GTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 5 GTLYLIFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMI 64
Query: 198 XXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSN 377
N L+PL++GAPD+AFPR+NN+ F +E GAGTG TVYPPL+ N
Sbjct: 65 GGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGIEAGAGTGWTVYPPLAGN 124
Query: 378 IAHRG 392
+AH G
Sbjct: 125 LAHAG 129
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 101 bits (243), Expect = 4e-21
Identities = 54/125 (43%), Positives = 65/125 (52%)
Frame = +3
Query: 18 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXX 197
GTLY AELG PG+L+G+D IYN IVTAHA
Sbjct: 16 GTLYLLFGAWAGVLGTALSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMPIMI 75
Query: 198 XXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSN 377
N LVPL++GAPD+AFPR+NN+ F +VE GAGTG TVYPPL+ N
Sbjct: 76 GGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSLLLLLASAMVEAGAGTGWTVYPPLAGN 135
Query: 378 IAHRG 392
+H G
Sbjct: 136 YSHPG 140
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 98.7 bits (235), Expect = 4e-20
Identities = 49/101 (48%), Positives = 59/101 (58%)
Frame = +3
Query: 90 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 269
EL +PGS++GDD +YN IVTAHA N VPL++GAPD+AFPR+NN
Sbjct: 41 ELSSPGSMLGDDHLYNVIVTAHAFVMIFFLVMPTMIGGFGNWFVPLMIGAPDMAFPRLNN 100
Query: 270 IRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRG 392
I F +VE GAGTG TVYPPL+S AH G
Sbjct: 101 ISFWLLPPALFLLLGSSLVEQGAGTGWTVYPPLASIQAHSG 141
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 92.3 bits (219), Expect = 3e-18
Identities = 46/101 (45%), Positives = 58/101 (57%)
Frame = +3
Query: 90 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 269
ELG PGSLIG+DQIYN+IVT+HA N L+PL+LG+PD++FPR+NN
Sbjct: 24 ELGMPGSLIGNDQIYNSIVTSHAFIMIFFMVMPVMIGGFGNWLIPLMLGSPDMSFPRMNN 83
Query: 270 IRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRG 392
+ F + G GTG TVYPPLS + H G
Sbjct: 84 MSFWLLIPSLLLLILSMFINVGVGTGWTVYPPLSLILGHGG 124
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 91.5 bits (217), Expect = 5e-18
Identities = 49/95 (51%), Positives = 57/95 (60%)
Frame = +3
Query: 87 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 266
AELG PG+L+GDDQ N IVTAHA N LVPL++GAPD+AFPR+N
Sbjct: 40 AELGQPGTLLGDDQXXNVIVTAHAFVMIFXMXMPIMIGGFGNWLVPLMIGAPDMAFPRMN 99
Query: 267 NIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS 371
N+ F VE GAGTG TVYPPL+
Sbjct: 100 NMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLA 134
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 86.2 bits (204), Expect = 2e-16
Identities = 51/127 (40%), Positives = 59/127 (46%), Gaps = 2/127 (1%)
Frame = +3
Query: 18 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXX 191
GTLY EL PG L GD Q+YN I+TAHA
Sbjct: 14 GTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPA 73
Query: 192 XXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS 371
N LVP+++GAPD+AFPR+NNI F VE GAGTG TVYPPLS
Sbjct: 74 MVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLS 133
Query: 372 SNIAHRG 392
+H G
Sbjct: 134 GLQSHSG 140
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 86.2 bits (204), Expect = 2e-16
Identities = 51/127 (40%), Positives = 59/127 (46%), Gaps = 2/127 (1%)
Frame = +3
Query: 18 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXX 191
GTLY EL PG L GD Q+YN I+TAHA
Sbjct: 14 GTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPA 73
Query: 192 XXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS 371
N LVP+++GAPD+AFPR+NNI F VE GAGTG TVYPPLS
Sbjct: 74 MVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLS 133
Query: 372 SNIAHRG 392
+H G
Sbjct: 134 GLQSHSG 140
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 86.2 bits (204), Expect = 2e-16
Identities = 51/127 (40%), Positives = 59/127 (46%), Gaps = 2/127 (1%)
Frame = +3
Query: 18 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXX 191
GTLY EL PG L GD Q+YN I+TAHA
Sbjct: 14 GTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPA 73
Query: 192 XXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS 371
N LVP+++GAPD+AFPR+NNI F VE GAGTG TVYPPLS
Sbjct: 74 MVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLS 133
Query: 372 SNIAHRG 392
+H G
Sbjct: 134 GLQSHSG 140
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 84.6 bits (200), Expect = 6e-16
Identities = 48/127 (37%), Positives = 61/127 (48%), Gaps = 2/127 (1%)
Frame = +3
Query: 18 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXX 191
GTLY EL P + L+G+ QIYN ++TAHA
Sbjct: 22 GTLYLIFGAFSGVLGGCMSMLIRMELAQPSNHLLLGNHQIYNVLITAHAFLMIFFMVMPV 81
Query: 192 XXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS 371
N LVP+++G+PD+AFPR+NNI F +VE G GTG TVYPPLS
Sbjct: 82 MIGGFGNWLVPIMIGSPDMAFPRLNNISFWLLPPSLCLLLMSALVEVGVGTGWTVYPPLS 141
Query: 372 SNIAHRG 392
S +H G
Sbjct: 142 SIQSHSG 148
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 83.8 bits (198), Expect = 1e-15
Identities = 47/127 (37%), Positives = 59/127 (46%), Gaps = 2/127 (1%)
Frame = +3
Query: 18 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXXXXX 191
GTLY EL PG I G+ Q+YN ++TAHA
Sbjct: 17 GTLYFIFGAIAGVMGTCFSVLIRMELARPGDQILGGNHQLYNVLITAHAFLMIFFMVMPA 76
Query: 192 XXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS 371
N VP+++GAPD+AFPR+NNI F +VE G+GTG TVYPPLS
Sbjct: 77 MIGGFGNWFVPILIGAPDMAFPRLNNISFWLLPPSLLLLLSSALVEVGSGTGWTVYPPLS 136
Query: 372 SNIAHRG 392
+H G
Sbjct: 137 GITSHSG 143
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 81.4 bits (192), Expect = 6e-15
Identities = 46/103 (44%), Positives = 55/103 (53%), Gaps = 2/103 (1%)
Frame = +3
Query: 90 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 263
EL PGS L G+ Q++N +V HA N L+PL++GA D AFPRI
Sbjct: 39 ELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMIGATDTAFPRI 98
Query: 264 NNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRG 392
NNI F +VE+GAGTG TVYPPLSS AH G
Sbjct: 99 NNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSG 141
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 81.4 bits (192), Expect = 6e-15
Identities = 46/103 (44%), Positives = 55/103 (53%), Gaps = 2/103 (1%)
Frame = +3
Query: 90 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 263
EL PGS L G+ Q++N +V HA N L+PL++GA D AFPRI
Sbjct: 39 ELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMIGATDTAFPRI 98
Query: 264 NNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRG 392
NNI F +VE+GAGTG TVYPPLSS AH G
Sbjct: 99 NNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSG 141
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 79.4 bits (187), Expect = 2e-14
Identities = 42/102 (41%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Frame = +3
Query: 90 ELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 266
EL PG I D+Q+YN+I+TAHA N L+PL LG PD+ FPR+N
Sbjct: 40 ELSGPGVQYIADNQLYNSIITAHAIIMIFFMVMPALIGGFGNFLLPLGLGGPDMGFPRLN 99
Query: 267 NIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRG 392
NI + +ENG GTG T+YPPLS +H G
Sbjct: 100 NISYLLLIPSIVLFLFAGGIENGVGTGWTLYPPLSGIQSHSG 141
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 79.0 bits (186), Expect = 3e-14
Identities = 38/100 (38%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Frame = +3
Query: 90 ELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 266
EL PG I D+Q+YN+I+T+H N L+P+++G PD+AFPR+N
Sbjct: 66 ELSGPGIQYIEDNQLYNSIITSHGVIMIFFMVMPALIGGFGNFLLPILIGGPDMAFPRLN 125
Query: 267 NIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAH 386
N+ + I+ENG GTG T+YPPLS +H
Sbjct: 126 NVSYWLLIPSLFLFVFAAIIENGVGTGWTLYPPLSGIQSH 165
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 77.8 bits (183), Expect = 7e-14
Identities = 43/103 (41%), Positives = 55/103 (53%), Gaps = 2/103 (1%)
Frame = +3
Query: 90 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 263
EL PG L G++Q++N +V HA N ++PL++GA D AFPRI
Sbjct: 39 ELAAPGQQYLHGNNQLFNVLVVGHAILMIFFMVMPALIGGFGNYMLPLMIGATDTAFPRI 98
Query: 264 NNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRG 392
NNI F +VE+GAGTG TVYPPL+S AH G
Sbjct: 99 NNIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLASIQAHSG 141
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 77.8 bits (183), Expect = 7e-14
Identities = 43/103 (41%), Positives = 56/103 (54%), Gaps = 2/103 (1%)
Frame = +3
Query: 90 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 263
EL PGS L G+ Q++N +V HA N ++PL++GA D++FPRI
Sbjct: 39 ELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLAMPALIGGFGNYMLPLMIGATDMSFPRI 98
Query: 264 NNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRG 392
N+I F +VE+GAGTG TVYPPLSS AH G
Sbjct: 99 NSIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSG 141
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 76.6 bits (180), Expect = 2e-13
Identities = 46/130 (35%), Positives = 59/130 (45%), Gaps = 5/130 (3%)
Frame = +3
Query: 18 GTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXXXX 194
GTLY EL PG I ++Q+YN+I+TAHA
Sbjct: 44 GTLYLIFALFSGLLGTAFSVLIRLELSGPGVQFIANNQLYNSIITAHAILMIFFMVMPAL 103
Query: 195 XXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV----YP 362
N L+PL++G PD+AFPR+NNI F I+E G GTG T+ YP
Sbjct: 104 IGGFGNFLMPLMIGGPDMAFPRLNNISFWLLPPSLLLLVFSAIIEGGVGTGWTLLKDKYP 163
Query: 363 PLSSNIAHRG 392
PLS +H G
Sbjct: 164 PLSGLQSHSG 173
>UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI2
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI2 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI2 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI2 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 533
Score = 72.5 bits (170), Expect = 3e-12
Identities = 47/123 (38%), Positives = 54/123 (43%), Gaps = 2/123 (1%)
Frame = +3
Query: 18 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXX 191
GTLY EL PG L GD Q+YN I+TAHA
Sbjct: 14 GTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPA 73
Query: 192 XXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS 371
N LVP+++GAPD+AFPR+NNI F VE GAGTG TV LS
Sbjct: 74 MVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVKCKLS 133
Query: 372 SNI 380
I
Sbjct: 134 QII 136
>UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1;
Watasenia scintillans|Rep: Cytochrome c oxidase subunit
I - Watasenia scintillans (Sparkling enope)
Length = 217
Score = 71.7 bits (168), Expect = 5e-12
Identities = 33/63 (52%), Positives = 40/63 (63%)
Frame = +3
Query: 90 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 269
ELG PGSL+ DDQ+YN +VTAH N LVPL+LGAPD+AFPR+NN
Sbjct: 24 ELGQPGSLLNDDQLYNVVVTAHGFIMIFFMVMPIMIGGFGNWLVPLMLGAPDMAFPRMNN 83
Query: 270 IRF 278
+ F
Sbjct: 84 MSF 86
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 71.3 bits (167), Expect = 6e-12
Identities = 42/103 (40%), Positives = 53/103 (51%), Gaps = 2/103 (1%)
Frame = +3
Query: 90 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 263
EL N GS L G+ Q +N ++TAHA N L+PL+LGA D+AF R+
Sbjct: 44 ELANTGSPFLHGNTQAFNVVITAHAILMIFFFVMPALVGGFGNYLMPLMLGASDMAFARL 103
Query: 264 NNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRG 392
NNI F +VE GAGTG TVY PL+ +H G
Sbjct: 104 NNISFWLLVPSLILILTSALVEAGAGTGWTVYFPLAGIQSHSG 146
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 70.1 bits (164), Expect = 1e-11
Identities = 39/103 (37%), Positives = 47/103 (45%), Gaps = 2/103 (1%)
Frame = +3
Query: 90 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 263
EL PG L G+ YN I T H N VP+++GAPD++FPR+
Sbjct: 42 ELAFPGDQILFGEYHFYNMITTVHGVLMLFVVVMPILFGGFGNYFVPILIGAPDMSFPRL 101
Query: 264 NNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRG 392
NN F E G GTG TVYPPLSS +H G
Sbjct: 102 NNFSFWLLPGAILLAVLATYSEGGPGTGWTVYPPLSSLQSHSG 144
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 69.3 bits (162), Expect = 2e-11
Identities = 35/98 (35%), Positives = 51/98 (52%)
Frame = +3
Query: 99 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 278
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRINN+ F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
Query: 279 XXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRG 392
+++ G G+G T+YPPL+S +H G
Sbjct: 121 VVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSG 158
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 69.3 bits (162), Expect = 2e-11
Identities = 35/98 (35%), Positives = 51/98 (52%)
Frame = +3
Query: 99 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 278
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRINN+ F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
Query: 279 XXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRG 392
+++ G G+G T+YPPL+S +H G
Sbjct: 121 VVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSG 158
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 69.3 bits (162), Expect = 2e-11
Identities = 35/98 (35%), Positives = 51/98 (52%)
Frame = +3
Query: 99 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 278
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRINN+ F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
Query: 279 XXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRG 392
+++ G G+G T+YPPL+S +H G
Sbjct: 121 VVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSG 158
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 69.3 bits (162), Expect = 2e-11
Identities = 35/98 (35%), Positives = 51/98 (52%)
Frame = +3
Query: 99 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 278
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRINN+ F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
Query: 279 XXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRG 392
+++ G G+G T+YPPL+S +H G
Sbjct: 121 VVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSG 158
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 67.3 bits (157), Expect = 1e-10
Identities = 32/56 (57%), Positives = 37/56 (66%)
Frame = +3
Query: 225 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRG 392
L+LGAPD+AFPR+NN+ F +VENGAGTG TVYPPLSS AH G
Sbjct: 1 LMLGAPDMAFPRMNNMSFWMLPPSLTLLLSSSMVENGAGTGWTVYPPLSSGTAHAG 56
>UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia
polymorpha|Rep: CoxI intron4 ORF - Marchantia polymorpha
(Liverwort)
Length = 434
Score = 65.3 bits (152), Expect = 4e-10
Identities = 38/115 (33%), Positives = 51/115 (44%), Gaps = 2/115 (1%)
Frame = +3
Query: 18 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXXXXX 191
GTLY EL PG+ I G+ Q+YN ++TAHA
Sbjct: 18 GTLYLIFGAIAGVMGTCFSVLIRMELAQPGNQILGGNHQLYNVLITAHAFLMIFFMVMPA 77
Query: 192 XXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 356
N VP+++G+PD+AFPR+NNI F +VE G G+G TV
Sbjct: 78 MIGGFGNWFVPILIGSPDMAFPRLNNISFWLLPPSLLLLLSSALVEVGCGSGWTV 132
>UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia
lipolytica|Rep: COX1-i3 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 457
Score = 62.9 bits (146), Expect = 2e-09
Identities = 39/99 (39%), Positives = 49/99 (49%), Gaps = 2/99 (2%)
Frame = +3
Query: 90 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 263
EL N GS L G+ Q +N ++TAHA N L+PL+LGA D+AF R+
Sbjct: 44 ELANTGSPFLHGNTQAFNVVITAHAILMIFFFVMPALVGGFGNYLMPLMLGASDMAFARL 103
Query: 264 NNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNI 380
NNI F +VE GAGTG TV SS +
Sbjct: 104 NNISFWLLVPSLILILTSALVEAGAGTGWTVKKICSSKM 142
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 60.9 bits (141), Expect = 9e-09
Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 2/96 (2%)
Frame = +3
Query: 90 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 263
EL +PG G Q+YN+++T H N ++PL+LGAP++AFPR+
Sbjct: 49 ELSSPGGHLFFGSGQVYNSVLTMHGVLMIFFLVMPILIGGFGNWMLPLMLGAPEMAFPRV 108
Query: 264 NNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS 371
N + F + G G+ T YPPLS
Sbjct: 109 NALSFWFTFVALLMVYQSFFIGGGPGSSWTFYPPLS 144
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 60.5 bits (140), Expect = 1e-08
Identities = 31/98 (31%), Positives = 47/98 (47%), Gaps = 2/98 (2%)
Frame = +3
Query: 87 AELGNPGSLIG--DDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 260
A LG L G D ++N ++T H N +PL++GAPD+AFPR
Sbjct: 143 ALLGTMDQLDGNPDGHLWNVLITGHGVLMMFFVVIPALFGGFGNYFMPLMIGAPDMAFPR 202
Query: 261 INNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSS 374
+NN+ + +++ GAG G T YPP+S+
Sbjct: 203 LNNLSYWMYVAGTCLAFCSVMIDGGAGPGWTFYPPISA 240
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 58.4 bits (135), Expect = 5e-08
Identities = 28/88 (31%), Positives = 39/88 (44%)
Frame = +3
Query: 105 GSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXX 284
G L GD Q YN ++T+H N +P++ G PD+ FPR+NN+ F
Sbjct: 48 GILFGDYQFYNVLITSHGLIMVFAFIMPVMMGGLVNYFIPVMAGFPDMVFPRLNNMSFWM 107
Query: 285 XXXXXXXXXXXXIVENGAGTG*TVYPPL 368
+ E G G G T+YP L
Sbjct: 108 YLAGFGCVVNGFLTEEGMGVGWTLYPTL 135
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 58.0 bits (134), Expect = 6e-08
Identities = 32/87 (36%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Frame = +3
Query: 129 IYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXX 308
++N ++TAH N VP+++GAPD+AFPR+NNI F
Sbjct: 93 LWNVLITAHGLIMVFFMVMPAMIGGFGNWFVPIMIGAPDMAFPRMNNISFWLLIPAFALL 152
Query: 309 XXXXIVE----NGAGTG*TVYPPLSSN 377
V NGAGTG TVY PLS++
Sbjct: 153 LGSTFVPGGTGNGAGTGWTVYAPLSTS 179
>UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1;
Kluyveromyces thermotolerans|Rep: Putative DNA
endonuclease - Kluyveromyces thermotolerans (Yeast)
Length = 542
Score = 57.2 bits (132), Expect = 1e-07
Identities = 33/91 (36%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Frame = +3
Query: 90 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 263
EL PG+ L G+ Q++N +V HA N L+PL++GA D++F R+
Sbjct: 39 ELAAPGNQYLGGNHQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMIGASDMSFARL 98
Query: 264 NNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 356
NNI F +VE+GAGTG TV
Sbjct: 99 NNISFWLLPPALVCLVTSTLVESGAGTGWTV 129
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 56.0 bits (129), Expect = 2e-07
Identities = 31/56 (55%), Positives = 33/56 (58%)
Frame = +3
Query: 225 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRG 392
L LGAPD FPR N+ F VE GAGTG TV PPLS+NIAH G
Sbjct: 4 LXLGAPDXXFPRXINMSFWFLPPXLSFFLXSSXVEKGAGTGWTVSPPLSANIAHEG 59
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 52.8 bits (121), Expect = 2e-06
Identities = 26/84 (30%), Positives = 39/84 (46%)
Frame = +3
Query: 129 IYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXX 308
+YN I T H N +P++ G+P++A+PRIN+I
Sbjct: 58 LYNMIFTIHGIIMIFFNIMPGLFGGFGNYFLPILCGSPELAYPRINSISLLLQPIAFVLV 117
Query: 309 XXXXIVENGAGTG*TVYPPLSSNI 380
E G GTG T+YPPLS+++
Sbjct: 118 ILSTAAEFGGGTGWTLYPPLSTSL 141
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 50.4 bits (115), Expect = 1e-05
Identities = 30/95 (31%), Positives = 42/95 (44%)
Frame = +3
Query: 90 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 269
EL PG I D YN + T H N L+P+++GA D+AFP++N
Sbjct: 63 ELLTPGPTIMDAMTYNRMFTLHGVVMIFLFMIPAIPSGFGNFLLPIMIGAKDVAFPKLNL 122
Query: 270 IRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSS 374
+ F +V+ GA TG T Y P S+
Sbjct: 123 LSF-YVYLAGAVVALFGMVQGGADTGWTFYTPYST 156
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 50.4 bits (115), Expect = 1e-05
Identities = 26/96 (27%), Positives = 43/96 (44%)
Frame = +3
Query: 90 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 269
EL +PG + +Y++I+T HA N +PL++ D++ PR+NN
Sbjct: 42 ELSHPGEWLQVGYMYHSIMTMHAFMMIFFFVMPTSIGGLGNWFIPLMIKIKDLSMPRLNN 101
Query: 270 IRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSN 377
+ + G G G T+YPPLS++
Sbjct: 102 LSVWLALGSLFLMCMAFLSSGGLGCGWTMYPPLSNS 137
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 50.0 bits (114), Expect = 2e-05
Identities = 26/89 (29%), Positives = 41/89 (46%)
Frame = +3
Query: 126 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXX 305
+IYN + T H N L P++LG D+ +PR+N
Sbjct: 60 EIYNLLFTLHGLIMVFFNIMTGLFGGIGNYLYPVLLGYCDVVYPRVNLYSLLFQPIGFVL 119
Query: 306 XXXXXIVENGAGTG*TVYPPLSSNIAHRG 392
+E G+GTG T+YPPLS+++++ G
Sbjct: 120 VVSSIYLEIGSGTGWTLYPPLSTSLSNVG 148
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 48.4 bits (110), Expect = 5e-05
Identities = 34/98 (34%), Positives = 41/98 (41%)
Frame = +3
Query: 93 LGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNI 272
L G +IG QI VTA A L PL +GAP +A PR+ N+
Sbjct: 31 LSXXGQVIGXGQIXXVGVTAXALVMIFFFVMPTLXGGFGXXLXPLXVGAPXMAXPRLXNM 90
Query: 273 RFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAH 386
F + G G VYPP SS +AH
Sbjct: 91 SFWLLPPSLXXLCLSVFIGXGVGXXWXVYPPXSSGLAH 128
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 47.2 bits (107), Expect = 1e-04
Identities = 28/92 (30%), Positives = 39/92 (42%)
Frame = +3
Query: 102 PGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFX 281
PG + D + YN ++T H N L+PL++GA D+AFPR+N + +
Sbjct: 2 PGMQVVDFKTYNYLLTGHGVGMLFWWAIAAHIGGFGNFLLPLMIGAKDVAFPRLNALSWW 61
Query: 282 XXXXXXXXXXXXXIVENGAGTG*TVYPPLSSN 377
I N T T YPP S N
Sbjct: 62 AFFAANVLFLMTLIPGNHIMTMWTGYPPFSLN 93
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 46.0 bits (104), Expect = 3e-04
Identities = 29/97 (29%), Positives = 39/97 (40%)
Frame = +3
Query: 87 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 266
A+L P + D YN I T H N +VPL +GA D+AFP +N
Sbjct: 80 AQLALPNNSFLDSNHYNEIFTTHGTIMIIFMAMPFLIGLI-NVVVPLQIGARDVAFPYLN 138
Query: 267 NIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSN 377
N+ F ++ G T Y PL+SN
Sbjct: 139 NLSFWTFFVGAMLFNISFVIGGSPNAGWTSYMPLASN 175
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 45.6 bits (103), Expect = 4e-04
Identities = 29/96 (30%), Positives = 39/96 (40%)
Frame = +3
Query: 90 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 269
EL PG I D YN T H N ++PL+LGA D+AFPR+N
Sbjct: 70 ELLTPGPTIMDAMTYNRTFTLHGLVMIFLFMIPAIPAVFGNFMLPLMLGAKDVAFPRLNL 129
Query: 270 IRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSN 377
+ ++ G TG T Y P S++
Sbjct: 130 LSL-YIYLAGAVLALWGMLNGGLDTGWTFYTPYSAH 164
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 45.6 bits (103), Expect = 4e-04
Identities = 23/63 (36%), Positives = 34/63 (53%)
Frame = +3
Query: 90 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 269
EL +PG + + YN+++T+H N L+PL++GA D+AFPRIN
Sbjct: 122 ELADPGMTVISNTFYNSLLTSHGITMLFLFATPIIAAFS-NYLIPLLIGADDMAFPRINA 180
Query: 270 IRF 278
I F
Sbjct: 181 IAF 183
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 45.2 bits (102), Expect = 5e-04
Identities = 28/88 (31%), Positives = 35/88 (39%), Gaps = 1/88 (1%)
Frame = +3
Query: 132 YNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXX 311
Y I T H N L+PL++GA D+AFPR+N F
Sbjct: 86 YQQIFTTHGLVMIFFAVTPVLIGTFGNLLIPLMIGARDMAFPRLNMYSFWTFLLSQLLVL 145
Query: 312 XXXIVENG-AGTG*TVYPPLSSNIAHRG 392
G AG G T Y PLS+N+ G
Sbjct: 146 ASFFAPLGSAGAGWTTYTPLSTNVGMPG 173
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 44.4 bits (100), Expect = 8e-04
Identities = 25/83 (30%), Positives = 36/83 (43%), Gaps = 1/83 (1%)
Frame = +3
Query: 126 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXX 305
+ Y +VT HA N L+PL++GA D+AFP +N + +
Sbjct: 86 EFYTVLVTMHATVMIFLVIIPILAGAFGNFLIPLMIGADDMAFPTLNMLSYWFMWPAFFF 145
Query: 306 XXXXXIVE-NGAGTG*TVYPPLS 371
+ +GA G T YPPLS
Sbjct: 146 FGGAFFCDGHGAAAGWTSYPPLS 168
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 43.6 bits (98), Expect = 0.001
Identities = 31/103 (30%), Positives = 42/103 (40%), Gaps = 1/103 (0%)
Frame = +3
Query: 87 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 266
AEL PG ++ +N + T H N ++PL +GAPD+AFPR+N
Sbjct: 65 AELFTPGLQFLSNEQFNQLFTMHGTVMLLLYGTPIVWGFA-NYVLPLQIGAPDVAFPRLN 123
Query: 267 NIRFXXXXXXXXXXXXXXIVENGAGT-G*TVYPPLSSNIAHRG 392
F + GA G T+Y PLS I G
Sbjct: 124 AFGFWITTVGGVAMLTGFLTPGGAADFGWTMYSPLSDAIHSPG 166
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 41.1 bits (92), Expect = 0.008
Identities = 27/95 (28%), Positives = 39/95 (41%), Gaps = 1/95 (1%)
Frame = +3
Query: 90 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 269
EL P + + D +YN + T H N L+P ++GAPD+AFP++N
Sbjct: 64 ELITPPADLVDPSVYNGLYTMHGTVMLFLFLFPILNGFN-NLLIPTMIGAPDMAFPKLNA 122
Query: 270 IRFXXXXXXXXXXXXXXIVENG-AGTG*TVYPPLS 371
F G A +G YPP+S
Sbjct: 123 AAFWLVPVFSIVLMGSFFAPGGPASSGWWSYPPMS 157
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 40.3 bits (90), Expect = 0.013
Identities = 27/94 (28%), Positives = 37/94 (39%)
Frame = +3
Query: 90 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 269
EL P ++YN ++T H N L+PL++G D+AFPR+N
Sbjct: 55 ELATPSPDFVQPEMYNQLMTLHGTIMIFLWIVPAGAAFA-NYLIPLMVGTEDMAFPRLNA 113
Query: 270 IRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS 371
+ F V G T YPPLS
Sbjct: 114 VAFWLTPPGGILLISSFFV-GAPQAGWTSYPPLS 146
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 39.9 bits (89), Expect = 0.017
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +3
Query: 210 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIV-ENGAGTG*TVYPPLSS 374
N LVP ++GAPD+ +PRIN + F + ++G G T+YPPLS+
Sbjct: 86 NILVPKLIGAPDMYWPRINALSFWMQVPATVFMWSSLLFWQHGDSIGWTLYPPLST 141
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 39.5 bits (88), Expect = 0.023
Identities = 26/95 (27%), Positives = 36/95 (37%), Gaps = 1/95 (1%)
Frame = +3
Query: 90 ELGNPGSLIGDD-QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 266
EL G I DD +YNT + H N +PL++GA D+AFPR+N
Sbjct: 42 ELSQIGPTITDDPSVYNTWLYFHGAAMILAFQIPALTGFFANYFIPLMIGAKDVAFPRVN 101
Query: 267 NIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS 371
+ + + T YPP S
Sbjct: 102 ALSVWLFYAGVLVALTTFFIPDPPDIMWTGYPPYS 136
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 39.5 bits (88), Expect = 0.023
Identities = 22/86 (25%), Positives = 36/86 (41%), Gaps = 1/86 (1%)
Frame = +3
Query: 129 IYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXX 308
IYN +T H N L+P+++G +++ PR+N I F
Sbjct: 63 IYNNWITIHGLIMLFVFIMPVGIGFYGNYLIPMLIGTSELSMPRMNGISFWMLIVGVVIF 122
Query: 309 XXXXI-VENGAGTG*TVYPPLSSNIA 383
+ + +G T+YPPLS+ A
Sbjct: 123 VISNVLMSKPISSGWTLYPPLSTRDA 148
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 39.5 bits (88), Expect = 0.023
Identities = 26/94 (27%), Positives = 37/94 (39%), Gaps = 2/94 (2%)
Frame = +3
Query: 90 ELGNPGSL-IGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 266
+LG PG+ D Y +T H N L+PL++GA D+ FP +N
Sbjct: 66 QLGFPGTFSFIDANQYLQFITMHGMIMVIYLLTALFLGGFGNYLIPLMVGARDMVFPYVN 125
Query: 267 NIRFXXXXXXXXXXXXXXIVENG-AGTG*TVYPP 365
+ + V G G G T+YPP
Sbjct: 126 MLSYWVYLLAVLVLASAFFVPGGPTGAGWTLYPP 159
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 39.5 bits (88), Expect = 0.023
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +3
Query: 210 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGA-GTG*TVYPPLSSNI 380
N +VPL +GA D+AFPR+N + + E+GA G T+Y PL++ I
Sbjct: 88 NYIVPLQIGARDLAFPRLNALSYWLYLLSGLVLLASFFTESGAPNVGWTLYAPLTARI 145
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 38.7 bits (86), Expect = 0.040
Identities = 21/54 (38%), Positives = 28/54 (51%)
Frame = +3
Query: 210 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS 371
N +VPL +GA D+AFP +N++ F V N A TG YPPL+
Sbjct: 125 NIVVPLQIGARDVAFPFLNSLSFWLLVSAVILVNLSLGVGNFARTGWVAYPPLA 178
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 38.7 bits (86), Expect = 0.040
Identities = 28/95 (29%), Positives = 37/95 (38%)
Frame = +3
Query: 90 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 269
+L P L D +YN VT H N L+P PD+ FPR+N
Sbjct: 37 QLAFPSILTSD--VYNAFVTLHGLVMVFFAAMPTAIGFFANLLIPYHCNLPDLLFPRMNA 94
Query: 270 IRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSS 374
+ F ++ + A G T YPPLSS
Sbjct: 95 LSF-----WLMPFSLSLLLFSMASAGWTFYPPLSS 124
>UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1;
Pachymerium ferrugineum|Rep: Cytochrome oxidase subunit
I - Pachymerium ferrugineum
Length = 219
Score = 38.3 bits (85), Expect = 0.053
Identities = 20/44 (45%), Positives = 23/44 (52%)
Frame = +2
Query: 254 PTNK*YKILTPTPLPYIINFKKNCRKWCRNRMNSLPPTFI*YRT 385
P NK +KIL TPL Y N C K C + +NSLP Y T
Sbjct: 79 PPNKQFKILIITPLTYTTNSIYGCSKRCSHSVNSLPAPCCKYLT 122
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 37.9 bits (84), Expect = 0.071
Identities = 21/82 (25%), Positives = 32/82 (39%)
Frame = +3
Query: 126 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXX 305
+ Y + T HA N L+PL++GA D+AFP++N + +
Sbjct: 90 EFYTMLFTMHATVMIFLVIIPILAGMFGNFLIPLMIGADDMAFPKLNMLSYWFMWPAIAC 149
Query: 306 XXXXXIVENGAGTG*TVYPPLS 371
G G T YP L+
Sbjct: 150 FGMSFKYAGGPAAGWTSYPVLA 171
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 37.9 bits (84), Expect = 0.071
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = +3
Query: 90 ELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 263
EL +P S GD Y +VTAH N L+P +G+ D+A+PR+
Sbjct: 88 ELAHPESPFFKGDSLRYLQVVTAHGLIMVFFVVVPILFGGFANFLIPYHVGSKDVAYPRL 147
Query: 264 NNIRF 278
N+I F
Sbjct: 148 NSIGF 152
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 37.9 bits (84), Expect = 0.071
Identities = 26/96 (27%), Positives = 36/96 (37%), Gaps = 1/96 (1%)
Frame = +3
Query: 90 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 269
+L P + + YN I+T H N +VPL+LGA D+A PR+N
Sbjct: 52 QLAVPNNQFLTGEQYNQILTLHGATMLFFFIIQAGLTGFGNFVVPLMLGARDVALPRVNA 111
Query: 270 IRFXXXXXXXXXXXXXXIVENGA-GTG*TVYPPLSS 374
+ GA G T Y P S+
Sbjct: 112 FSYWAFLGAIVLALMSYFFPGGAPSVGWTFYYPFSA 147
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 37.1 bits (82), Expect = 0.12
Identities = 19/54 (35%), Positives = 27/54 (50%)
Frame = +3
Query: 210 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS 371
N ++PL +G+ D+AFP +N + F I+ A TG YPPLS
Sbjct: 119 NIIIPLQIGSKDVAFPSLNLLSFWLTFFSVLLINISLIIGEFAKTGWLGYPPLS 172
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 37.1 bits (82), Expect = 0.12
Identities = 24/95 (25%), Positives = 37/95 (38%)
Frame = +3
Query: 90 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 269
+L P + +++N + T H N VPL++GA D+AFPR+N+
Sbjct: 60 QLAFPNNTFLSPEMFNQLFTMHGTTMVFLVGMPVLTGFA-NYFVPLMIGARDVAFPRLNS 118
Query: 270 IRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSS 374
F + + G Y PLSS
Sbjct: 119 FGFWMFFFGAALLHFSFLTGSAPNAGWFSYVPLSS 153
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 36.3 bits (80), Expect = 0.22
Identities = 24/94 (25%), Positives = 35/94 (37%)
Frame = +3
Query: 90 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 269
+LG P + +YN + T H N +VPL++GA D+AFPR+N
Sbjct: 59 QLGVPDNTFLTPDVYNQMFTMHGTTMIFLGLMPLNVGLG-NYMVPLMIGARDMAFPRLNA 117
Query: 270 IRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS 371
+ V G Y PL+
Sbjct: 118 LSIWLFIFGGLMLYVSFFVGGAPNVGWFAYAPLT 151
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 36.3 bits (80), Expect = 0.22
Identities = 26/96 (27%), Positives = 38/96 (39%), Gaps = 2/96 (2%)
Frame = +3
Query: 90 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 269
EL + +YN ++T+H N +PL++ A D+AFPRIN
Sbjct: 96 ELATSSETLISPSLYNGLLTSHGITMLFLFGTPMIAAFG-NYFIPLLIDADDMAFPRINA 154
Query: 270 IRFXXXXXXXXXXXXXXIVEN--GAGTG*TVYPPLS 371
I F ++ A T T+Y PLS
Sbjct: 155 IAFWLLPPGAILIWSGFLIPGIATAQTSWTMYTPLS 190
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 35.5 bits (78), Expect = 0.38
Identities = 26/102 (25%), Positives = 38/102 (37%)
Frame = +3
Query: 87 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 266
A+L P S + YN + T H L+P +LG+ D+AFPR+
Sbjct: 56 AQLATPRSAFLGPEHYNQVFTMHGTIMMFLFAIPVFEGFAVY-LLPKLLGSRDLAFPRLT 114
Query: 267 NIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRG 392
F + +G +YPPLSS + G
Sbjct: 115 AYGFWCYVFGGSMMIFSLLWGIAPDSGWFMYPPLSSTLGAPG 156
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 35.5 bits (78), Expect = 0.38
Identities = 20/54 (37%), Positives = 26/54 (48%)
Frame = +3
Query: 210 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS 371
N VPL +GA D+AFP +N++ F V A TG YPPL+
Sbjct: 124 NLAVPLQIGARDVAFPFLNSLSFYLLLAGVLLVNISLGVGEFAKTGWVAYPPLA 177
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 35.1 bits (77), Expect = 0.50
Identities = 18/42 (42%), Positives = 19/42 (45%)
Frame = +2
Query: 197 WRIWKLXXXXXXXXXXXXXPTNK*YKILTPTPLPYIINFKKN 322
W IWKL P NK YKILT PL Y K+N
Sbjct: 28 WWIWKLINSANVSGPWYGFPANKQYKILTSAPLTYTPINKRN 69
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 34.3 bits (75), Expect = 0.87
Identities = 28/95 (29%), Positives = 36/95 (37%), Gaps = 1/95 (1%)
Frame = +3
Query: 90 ELGNPGS-LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 266
+L P + IG D+ YN I T H LVPL++G IAFPR+N
Sbjct: 57 QLAQPEARFIGPDR-YNQIFTMHGSNMMFLFAVPVMQAMAIY-LVPLMVGTRHIAFPRLN 114
Query: 267 NIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS 371
+ V+ G G Y PLS
Sbjct: 115 AFSYWMYLAGGLLLWIAFAVDTGPDIGWFAYVPLS 149
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 33.9 bits (74), Expect = 1.1
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = +3
Query: 90 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 266
+L PG + + +N + T HA N +PL++GA D+AFPR+N
Sbjct: 57 QLARPGLEVVTARTFNALFTMHATTMIFLGVMPLLSAFM-NYFLPLMIGARDVAFPRLN 114
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 33.5 bits (73), Expect = 1.5
Identities = 21/81 (25%), Positives = 30/81 (37%)
Frame = +3
Query: 129 IYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXX 308
+YN +VT H N +P+ L D+ PR+N++
Sbjct: 151 VYNYLVTNHGVAMIFFFLMPILIGGFGNYFLPIFLCLDDLLLPRLNSLSLWLMVPSIFYM 210
Query: 309 XXXXIVENGAGTG*TVYPPLS 371
G G G T+YPPLS
Sbjct: 211 ELSLYY--GCGIGWTLYPPLS 229
>UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1;
Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase
subunit I - Myrmarachne sp. G FSC-2006
Length = 129
Score = 33.5 bits (73), Expect = 1.5
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = +3
Query: 321 IVENGAGTG*TVYPPLSSNIAHRG 392
+VE G G G TVYPPL+S + H G
Sbjct: 12 MVEMGVGAGWTVYPPLASVVGHGG 35
>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
polypeptide I/III - Picrophilus torridus
Length = 841
Score = 33.5 bits (73), Expect = 1.5
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +3
Query: 216 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENG-AGTG*TVYPPLSS 374
L+PL +G+ D+ +PR+N + + + G TG TVY PLSS
Sbjct: 111 LIPLAIGSRDMIYPRMNALGYWLFLFSGIMLWSGFFLPGGNLDTGWTVYEPLSS 164
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 33.1 bits (72), Expect = 2.0
Identities = 23/94 (24%), Positives = 38/94 (40%), Gaps = 1/94 (1%)
Frame = +3
Query: 96 GNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIR 275
G PG ++ + Y +++T H N +P+ +GA D+AFPR N +
Sbjct: 75 GAPGDVM-TPEYYLSLLTMHGTLMVFFVLTNAPFAAFGNYFLPIQIGAEDMAFPRFNMMS 133
Query: 276 FXXXXXXXXXXXXXXIVENGAG-TG*TVYPPLSS 374
F + +G +G T Y LS+
Sbjct: 134 FWTTFAAFCVLIAAFFIPDGPPISGWTAYATLSA 167
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 33.1 bits (72), Expect = 2.0
Identities = 18/55 (32%), Positives = 26/55 (47%)
Frame = +3
Query: 210 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSS 374
N LVPL +GA D+AFPR+N + + G T+Y PL++
Sbjct: 89 NYLVPLQIGADDLAFPRLNALSYWLYLFSGILMGVSFFQGTTFAGGWTMYAPLNT 143
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 32.3 bits (70), Expect = 3.5
Identities = 23/102 (22%), Positives = 39/102 (38%)
Frame = +3
Query: 87 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 266
A+L +P S + Y + T H L+P +LG+ D+A+PR++
Sbjct: 56 AQLASPRSAFVGAETYAQLFTMHGTIMMFLFAIPMFEGLTIY-LLPKMLGSRDLAYPRLS 114
Query: 267 NIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRG 392
F + +G +YPPL+S + G
Sbjct: 115 AYGFWCYVLGGSMLIVALLAGIAPDSGWFMYPPLASTLGSPG 156
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 32.3 bits (70), Expect = 3.5
Identities = 21/86 (24%), Positives = 34/86 (39%), Gaps = 1/86 (1%)
Frame = +3
Query: 120 DDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXX 299
+ + Y +VT H N L+PL +GA D+A +N + +
Sbjct: 98 EPEFYLALVTMHGTIMVFFVLTAGLSGTFSNFLIPLQIGARDMASGFMNMLSYWFFFGSS 157
Query: 300 XXXXXXXIVENGAGTG-*TVYPPLSS 374
+E G +G +YPPLS+
Sbjct: 158 VIMFASIFLETGPASGSWVIYPPLSA 183
>UniRef50_Q8ID15 Cluster: Putative uncharacterized protein
MAL13P1.352; n=2; Plasmodium|Rep: Putative
uncharacterized protein MAL13P1.352 - Plasmodium
falciparum (isolate 3D7)
Length = 1106
Score = 32.3 bits (70), Expect = 3.5
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +2
Query: 287 TPLPYIINFKKNCRKWCRN 343
T L Y + KK+CRKWCRN
Sbjct: 697 TKLMYCVIKKKHCRKWCRN 715
>UniRef50_Q0BZ17 Cluster: Amidohydrolase family/endoribonuclease
L-PSP; n=1; Hyphomonas neptunium ATCC 15444|Rep:
Amidohydrolase family/endoribonuclease L-PSP -
Hyphomonas neptunium (strain ATCC 15444)
Length = 755
Score = 31.9 bits (69), Expect = 4.6
Identities = 14/45 (31%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = -2
Query: 352 VHPVPAPFSTILLEINNIREGGRSQNLILFIRGNAISG-APSIRG 221
+H AP+S + + + ++R+G S ++ + GN I+G AP + G
Sbjct: 164 LHRYGAPYSILNVRVLDVRDGSLSAPSVVTVSGNVITGVAPYVEG 208
>UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2;
Eutetramorium sp. BLF m1|Rep: Cytochrome c oxidase
subunit I - Eutetramorium sp. BLF m1
Length = 201
Score = 31.5 bits (68), Expect = 6.1
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +3
Query: 90 ELGNPGSLIGDDQIYNTIVTAHA 158
EL GS++ +QIYNT+VT+HA
Sbjct: 24 ELETCGSVLRSEQIYNTLVTSHA 46
>UniRef50_Q96L91 Cluster: E1A-binding protein p400; n=16; Amniota|Rep:
E1A-binding protein p400 - Homo sapiens (Human)
Length = 3160
Score = 31.5 bits (68), Expect = 6.1
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = -2
Query: 124 SSPINDPGFPNSARIKSLKDVPIIPDQIPKIKYNVPLV 11
S+P+ PG PN A++ + D P Q PK++ VP V
Sbjct: 3115 SAPLQTPGAPNPAQVPASSD---SPSQQPKLQMRVPAV 3149
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 31.5 bits (68), Expect = 6.1
Identities = 23/94 (24%), Positives = 34/94 (36%)
Frame = +3
Query: 90 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 269
+L P + Q YN ++T H N +VPL +GA D++FP +N
Sbjct: 52 QLAKPENAFLSAQAYNEVMTMHGTTMIFLAAMPLLFALM-NAVVPLQIGARDVSFPFLNA 110
Query: 270 IRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS 371
+ F + G T Y LS
Sbjct: 111 LGFWLFFFGHIFLNLSWFLGGAPDAGWTSYASLS 144
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 31.1 bits (67), Expect = 8.1
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = +3
Query: 132 YNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 266
YN ++T HA N +PL LG D+A PR+N
Sbjct: 74 YNQVLTMHAAIMLFFFLIPLGLFGFGNYFLPLQLGVRDVALPRLN 118
>UniRef50_Q00639 Cluster: GEgh7 protein; n=1; Blumeria graminis|Rep:
GEgh7 protein - Blumeria graminis
Length = 249
Score = 31.1 bits (67), Expect = 8.1
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = -2
Query: 115 INDPGFPNSARIKSLKDVPIIPDQIPKIKYNVPLVPN 5
IN P PN + + DVP + + N+P +PN
Sbjct: 28 INVPAIPNIPAVPDVPDVPATSKLVKRESINIPAIPN 64
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 313,836,139
Number of Sequences: 1657284
Number of extensions: 4786180
Number of successful extensions: 9918
Number of sequences better than 10.0: 89
Number of HSP's better than 10.0 without gapping: 9628
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9868
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 16503508437
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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