Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0214
         (424 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           25   1.5  
DQ974164-1|ABJ52804.1|  410|Anopheles gambiae serpin 4C protein.       23   4.6  
AY146732-1|AAO12092.1|  327|Anopheles gambiae odorant-binding pr...    23   6.0  
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    23   6.0  
AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform ...    22   8.0  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    22   8.0  

>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 24.6 bits (51), Expect = 1.5
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -3

Query: 272 MFSTCEQTVLTAASSFLDPN 213
           M S CE+T+    SSF DP+
Sbjct: 327 MISACEKTMQRMTSSFPDPH 346


>DQ974164-1|ABJ52804.1|  410|Anopheles gambiae serpin 4C protein.
          Length = 410

 Score = 23.0 bits (47), Expect = 4.6
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +2

Query: 368 LRYVTSWVRNTSEG 409
           +RY+ SWV N + G
Sbjct: 84  VRYINSWVHNQTHG 97


>AY146732-1|AAO12092.1|  327|Anopheles gambiae odorant-binding
           protein AgamOBP44 protein.
          Length = 327

 Score = 22.6 bits (46), Expect = 6.0
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = -3

Query: 290 LVTPLIMFSTCEQTVLTAASSFLDPNHFST 201
           LVTP ++ + C+   L    SFL   H  T
Sbjct: 12  LVTPNLIVAECDTKGLIVEKSFLQSVHDCT 41


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1099

 Score = 22.6 bits (46), Expect = 6.0
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -3

Query: 275 IMFSTCEQTVLTAASSFLDPN 213
           IM +TC++T+    +S  DP+
Sbjct: 263 IMLATCDKTMQRVTTSHSDPH 283


>AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform B
           protein.
          Length = 755

 Score = 22.2 bits (45), Expect = 8.0
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -2

Query: 159 VFEVPFENSAGPFNCHQTRFHM 94
           V EV  EN + PF+ H   FH+
Sbjct: 627 VDEVQQENLSHPFHLHGHAFHV 648


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 22.2 bits (45), Expect = 8.0
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = -3

Query: 182 TMRMSTAKCLKFLLRTPRGPLTVTRR 105
           T  + TAK L  L+R   GP    RR
Sbjct: 773 TKALRTAKALGCLMRNHSGPKCAKRR 798


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 470,759
Number of Sequences: 2352
Number of extensions: 10323
Number of successful extensions: 17
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 35060166
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)