Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0214
(424 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cycl... 25 0.46
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 22 2.5
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 22 3.3
EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase p... 21 4.3
AB201717-1|BAD90662.1| 107|Apis mellifera apime-corazonin prepr... 21 4.3
AY739659-1|AAU85298.1| 288|Apis mellifera hyperpolarization-act... 21 5.7
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 21 5.7
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 21 5.7
AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precur... 20 10.0
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 20 10.0
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 20 10.0
AB050744-1|BAB17753.1| 238|Apis mellifera period protein protein. 20 10.0
>AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cyclase
alpha 1 subunit protein.
Length = 699
Score = 24.6 bits (51), Expect = 0.46
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -2
Query: 249 CPHGGKLLFGSEPFLN 202
CP +LF S PFLN
Sbjct: 383 CPESDSILFVSSPFLN 398
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 22.2 bits (45), Expect = 2.5
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +3
Query: 57 KSESQNPRRAYGPCEIAS 110
KS S +PR GPC+ S
Sbjct: 880 KSPSPSPRPLVGPCKALS 897
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 21.8 bits (44), Expect = 3.3
Identities = 7/19 (36%), Positives = 10/19 (52%)
Frame = +1
Query: 271 MIKGVTKGFQYKMRAVYAH 327
M++G+ G QY Y H
Sbjct: 740 MLRGIASGMQYLAEMNYVH 758
>EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase
protein.
Length = 620
Score = 21.4 bits (43), Expect = 4.3
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +1
Query: 244 RTVCSHVENMIKGV 285
R VC +EN I+G+
Sbjct: 477 RAVCGRIENTIQGL 490
>AB201717-1|BAD90662.1| 107|Apis mellifera apime-corazonin
preprohormone protein.
Length = 107
Score = 21.4 bits (43), Expect = 4.3
Identities = 9/22 (40%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
Frame = -2
Query: 201 LQETRVY-HANVNSQVFEVPFE 139
LQ+ R+ N+N+Q+F+ P E
Sbjct: 59 LQKLRLLLQGNINNQLFQTPCE 80
>AY739659-1|AAU85298.1| 288|Apis mellifera
hyperpolarization-activated ion channelvariant T
protein.
Length = 288
Score = 21.0 bits (42), Expect = 5.7
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +2
Query: 350 LRVIQLLRYVTSW 388
LR+ +L+RYV+ W
Sbjct: 220 LRLSRLVRYVSQW 232
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 21.0 bits (42), Expect = 5.7
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +2
Query: 350 LRVIQLLRYVTSW 388
LR+ +L+RYV+ W
Sbjct: 220 LRLSRLVRYVSQW 232
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 21.0 bits (42), Expect = 5.7
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +2
Query: 350 LRVIQLLRYVTSW 388
LR+ +L+RYV+ W
Sbjct: 220 LRLSRLVRYVSQW 232
>AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precursor
protein.
Length = 405
Score = 20.2 bits (40), Expect = 10.0
Identities = 7/22 (31%), Positives = 12/22 (54%)
Frame = -3
Query: 149 FLLRTPRGPLTVTRRDFTWTVS 84
+ + PR PL + TWT++
Sbjct: 54 YYIYNPRYPLPYSGSKCTWTIT 75
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 20.2 bits (40), Expect = 10.0
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = +3
Query: 21 GSTKPKHEANCSKSESQNP 77
G P HE SKS ++ P
Sbjct: 521 GEISPHHEYYDSKSSTETP 539
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 20.2 bits (40), Expect = 10.0
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2
Query: 323 LTSPLTVSPLRVIQLLR 373
L +P+T +P V QLLR
Sbjct: 156 LPTPVTPTPTTVQQLLR 172
>AB050744-1|BAB17753.1| 238|Apis mellifera period protein protein.
Length = 238
Score = 20.2 bits (40), Expect = 10.0
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = +3
Query: 21 GSTKPKHEANCSKSESQNP 77
G P HE SKS ++ P
Sbjct: 219 GEISPHHEYYDSKSSTETP 237
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,528
Number of Sequences: 438
Number of extensions: 2289
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10873896
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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