Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0212
(610 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC073413-1|AAY40977.1| 256|Homo sapiens unknown protein. 166 5e-41
AK024685-1|BAB14961.1| 256|Homo sapiens protein ( Homo sapiens ... 162 8e-40
AF389338-1|AAP31443.1| 330|Homo sapiens acyl-CoA-desaturase pro... 161 2e-39
Y13647-1|CAA73998.1| 359|Homo sapiens stearoyl CoA desaturase p... 151 2e-36
S70284-1|AAB30631.1| 237|Homo sapiens stearoyl-CoA desaturase p... 151 2e-36
BC062303-1|AAH62303.1| 359|Homo sapiens stearoyl-CoA desaturase... 151 2e-36
BC005807-1|AAH05807.1| 355|Homo sapiens SCD protein protein. 151 2e-36
AL139819-4|CAH72824.1| 359|Homo sapiens stearoyl-CoA desaturase... 151 2e-36
AL139819-3|CAH72823.1| 242|Homo sapiens stearoyl-CoA desaturase... 151 2e-36
AK222862-1|BAD96582.1| 359|Homo sapiens stearoyl-CoA desaturase... 151 2e-36
AF097514-1|AAD29870.1| 359|Homo sapiens stearoyl-CoA desaturase... 151 2e-36
AB208982-1|BAD92219.1| 366|Homo sapiens stearoyl-CoA desaturase... 151 2e-36
AB032261-1|BAA93510.1| 359|Homo sapiens stearoyl-CoA desaturase... 151 2e-36
BC004936-1|AAH04936.1| 132|Homo sapiens SCD5 protein protein. 89 1e-17
L08240-1|AAA59593.1| 651|Homo sapiens MG81 protein. 31 2.4
BC125088-1|AAI25089.1| 688|Homo sapiens TBC1 domain family, mem... 31 2.4
BC101819-1|AAI01820.1| 688|Homo sapiens TBC1 domain family, mem... 31 2.4
BC101817-1|AAI01818.1| 688|Homo sapiens TBC1 domain family, mem... 31 2.4
BC026050-1|AAH26050.1| 366|Homo sapiens TBC1D25 protein protein. 31 2.4
>AC073413-1|AAY40977.1| 256|Homo sapiens unknown protein.
Length = 256
Score = 166 bits (404), Expect = 5e-41
Identities = 79/161 (49%), Positives = 103/161 (63%)
Frame = +3
Query: 126 TDIYRTPIMEAKQNNLAPTLEEEAQFEKLIAPQASDRKHEIIYANLITFAYGHISALYGL 305
TD + P +AK+ + LE P A ++ I++ N++ + H+ A+Y L
Sbjct: 6 TDAGKIPFCDAKEE-IRAGLESSEGGGGPERPGARGQRQNIVWRNVVLMSLLHLGAVYSL 64
Query: 306 YLCFSSAKWATIIMAYVILIAAEVGVTAGAHRLWTHRAYKAKRPLQIILMVMNSFAFQNS 485
L AK T++ AY + A +GVTAGAHRLW+HR+Y+AK PL+I L V NS AFQN
Sbjct: 65 VL-IPKAKPLTLLWAYFCFLLAALGVTAGAHRLWSHRSYRAKLPLRIFLAVANSMAFQND 123
Query: 486 AITWIRDHRMHHRYSDTDADPHNATRGFFYSHIGWLLVRKH 608
W RDHR HH+YS+TDADPHNA RGFF+SHIGWL VRKH
Sbjct: 124 IFEWSRDHRAHHKYSETDADPHNARRGFFFSHIGWLFVRKH 164
>AK024685-1|BAB14961.1| 256|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21032 fis, clone CAE07365. ).
Length = 256
Score = 162 bits (394), Expect = 8e-40
Identities = 79/161 (49%), Positives = 103/161 (63%)
Frame = +3
Query: 126 TDIYRTPIMEAKQNNLAPTLEEEAQFEKLIAPQASDRKHEIIYANLITFAYGHISALYGL 305
TD + P +AK+ + LE P A ++ I++ N++ + H+ A+Y L
Sbjct: 6 TDAGKIPFCDAKEE-IRAGLESSEGGGGPERPGARGQRQNIVWRNVVLMSLLHLGAVYSL 64
Query: 306 YLCFSSAKWATIIMAYVILIAAEVGVTAGAHRLWTHRAYKAKRPLQIILMVMNSFAFQNS 485
L AK T++ AY L+ A +GVTAGAHRLW+HR+Y+AK PL+I L V NS AFQN
Sbjct: 65 VL-IPKAKPLTLLWAYFCLLLAALGVTAGAHRLWSHRSYRAKLPLRIFLAVANSMAFQND 123
Query: 486 AITWIRDHRMHHRYSDTDADPHNATRGFFYSHIGWLLVRKH 608
RDHR HH+YS+TDADPHNA RGFF+SHIGWL VRKH
Sbjct: 124 IFERSRDHRAHHKYSETDADPHNARRGFFFSHIGWLFVRKH 164
>AF389338-1|AAP31443.1| 330|Homo sapiens acyl-CoA-desaturase
protein.
Length = 330
Score = 161 bits (390), Expect = 2e-39
Identities = 78/161 (48%), Positives = 102/161 (63%)
Frame = +3
Query: 126 TDIYRTPIMEAKQNNLAPTLEEEAQFEKLIAPQASDRKHEIIYANLITFAYGHISALYGL 305
TD + P +AK+ + LE P A ++ I++ N++ + H+ A+Y L
Sbjct: 6 TDAGKIPFCDAKEE-IRAGLESSEGGGGPERPGARGQRQNIVWRNVVLMSLLHLGAVYSL 64
Query: 306 YLCFSSAKWATIIMAYVILIAAEVGVTAGAHRLWTHRAYKAKRPLQIILMVMNSFAFQNS 485
L AK T++ AY + A +GVTAGAHRLW+HR+Y+AK PL+I L V NS AFQN
Sbjct: 65 VL-IPKAKPLTLLWAYFCFLLAALGVTAGAHRLWSHRSYRAKLPLRIFLAVANSMAFQND 123
Query: 486 AITWIRDHRMHHRYSDTDADPHNATRGFFYSHIGWLLVRKH 608
RDHR HH+YS+TDADPHNA RGFF+SHIGWL VRKH
Sbjct: 124 IFERSRDHRAHHKYSETDADPHNARRGFFFSHIGWLFVRKH 164
>Y13647-1|CAA73998.1| 359|Homo sapiens stearoyl CoA desaturase
protein.
Length = 359
Score = 151 bits (365), Expect = 2e-36
Identities = 63/149 (42%), Positives = 98/149 (65%)
Frame = +3
Query: 162 QNNLAPTLEEEAQFEKLIAPQASDRKHEIIYANLITFAYGHISALYGLYLCFSSAKWATI 341
++++ P ++++ + K E ++ N+I + H+ ALYG+ L + K+ T
Sbjct: 43 EDDIRPDIKDDIYDPTYKDKEGPSPKVEYVWRNIILMSLLHLGALYGITL-IPTCKFYTW 101
Query: 342 IMAYVILIAAEVGVTAGAHRLWTHRAYKAKRPLQIILMVMNSFAFQNSAITWIRDHRMHH 521
+ + +G+TAGAHRLW+HR+YKA+ PL++ L++ N+ AFQN W RDHR HH
Sbjct: 102 LWGVFYYFVSALGITAGAHRLWSHRSYKARLPLRLFLIIANTMAFQNDVYEWARDHRAHH 161
Query: 522 RYSDTDADPHNATRGFFYSHIGWLLVRKH 608
++S+T ADPHN+ RGFF+SH+GWLLVRKH
Sbjct: 162 KFSETHADPHNSRRGFFFSHVGWLLVRKH 190
>S70284-1|AAB30631.1| 237|Homo sapiens stearoyl-CoA desaturase
protein.
Length = 237
Score = 151 bits (365), Expect = 2e-36
Identities = 63/149 (42%), Positives = 98/149 (65%)
Frame = +3
Query: 162 QNNLAPTLEEEAQFEKLIAPQASDRKHEIIYANLITFAYGHISALYGLYLCFSSAKWATI 341
++++ P ++++ + K E ++ N+I + H+ ALYG+ L + K+ T
Sbjct: 41 EDDIRPDIKDDIYDPTYKDKEGPSPKVEYVWRNIILMSLLHLGALYGITL-IPTCKFYTW 99
Query: 342 IMAYVILIAAEVGVTAGAHRLWTHRAYKAKRPLQIILMVMNSFAFQNSAITWIRDHRMHH 521
+ + +G+TAGAHRLW+HR+YKA+ PL++ L++ N+ AFQN W RDHR HH
Sbjct: 100 LWGVFYYFVSALGITAGAHRLWSHRSYKARLPLRLFLIIANTMAFQNDVYEWARDHRAHH 159
Query: 522 RYSDTDADPHNATRGFFYSHIGWLLVRKH 608
++S+T ADPHN+ RGFF+SH+GWLLVRKH
Sbjct: 160 KFSETHADPHNSRRGFFFSHVGWLLVRKH 188
>BC062303-1|AAH62303.1| 359|Homo sapiens stearoyl-CoA desaturase
(delta-9-desaturase) protein.
Length = 359
Score = 151 bits (365), Expect = 2e-36
Identities = 63/149 (42%), Positives = 98/149 (65%)
Frame = +3
Query: 162 QNNLAPTLEEEAQFEKLIAPQASDRKHEIIYANLITFAYGHISALYGLYLCFSSAKWATI 341
++++ P ++++ + K E ++ N+I + H+ ALYG+ L + K+ T
Sbjct: 43 EDDIRPDIKDDIYDPTYKDKEGPSPKVEYVWRNIILMSLLHLGALYGITL-IPTCKFYTW 101
Query: 342 IMAYVILIAAEVGVTAGAHRLWTHRAYKAKRPLQIILMVMNSFAFQNSAITWIRDHRMHH 521
+ + +G+TAGAHRLW+HR+YKA+ PL++ L++ N+ AFQN W RDHR HH
Sbjct: 102 LWGVFYYFVSALGITAGAHRLWSHRSYKARLPLRLFLIIANTMAFQNDVYEWARDHRAHH 161
Query: 522 RYSDTDADPHNATRGFFYSHIGWLLVRKH 608
++S+T ADPHN+ RGFF+SH+GWLLVRKH
Sbjct: 162 KFSETHADPHNSRRGFFFSHVGWLLVRKH 190
>BC005807-1|AAH05807.1| 355|Homo sapiens SCD protein protein.
Length = 355
Score = 151 bits (365), Expect = 2e-36
Identities = 63/149 (42%), Positives = 98/149 (65%)
Frame = +3
Query: 162 QNNLAPTLEEEAQFEKLIAPQASDRKHEIIYANLITFAYGHISALYGLYLCFSSAKWATI 341
++++ P ++++ + K E ++ N+I + H+ ALYG+ L + K+ T
Sbjct: 43 EDDIRPDIKDDIYDPTYKDKEGPSPKVEYVWRNIILMSLLHLGALYGITL-IPTCKFYTW 101
Query: 342 IMAYVILIAAEVGVTAGAHRLWTHRAYKAKRPLQIILMVMNSFAFQNSAITWIRDHRMHH 521
+ + +G+TAGAHRLW+HR+YKA+ PL++ L++ N+ AFQN W RDHR HH
Sbjct: 102 LWGVFYYFVSALGITAGAHRLWSHRSYKARLPLRLFLIIANTMAFQNDVYEWARDHRAHH 161
Query: 522 RYSDTDADPHNATRGFFYSHIGWLLVRKH 608
++S+T ADPHN+ RGFF+SH+GWLLVRKH
Sbjct: 162 KFSETHADPHNSRRGFFFSHVGWLLVRKH 190
>AL139819-4|CAH72824.1| 359|Homo sapiens stearoyl-CoA desaturase
(delta-9-desaturase) protein.
Length = 359
Score = 151 bits (365), Expect = 2e-36
Identities = 63/149 (42%), Positives = 98/149 (65%)
Frame = +3
Query: 162 QNNLAPTLEEEAQFEKLIAPQASDRKHEIIYANLITFAYGHISALYGLYLCFSSAKWATI 341
++++ P ++++ + K E ++ N+I + H+ ALYG+ L + K+ T
Sbjct: 43 EDDIRPDIKDDIYDPTYKDKEGPSPKVEYVWRNIILMSLLHLGALYGITL-IPTCKFYTW 101
Query: 342 IMAYVILIAAEVGVTAGAHRLWTHRAYKAKRPLQIILMVMNSFAFQNSAITWIRDHRMHH 521
+ + +G+TAGAHRLW+HR+YKA+ PL++ L++ N+ AFQN W RDHR HH
Sbjct: 102 LWGVFYYFVSALGITAGAHRLWSHRSYKARLPLRLFLIIANTMAFQNDVYEWARDHRAHH 161
Query: 522 RYSDTDADPHNATRGFFYSHIGWLLVRKH 608
++S+T ADPHN+ RGFF+SH+GWLLVRKH
Sbjct: 162 KFSETHADPHNSRRGFFFSHVGWLLVRKH 190
>AL139819-3|CAH72823.1| 242|Homo sapiens stearoyl-CoA desaturase
(delta-9-desaturase) protein.
Length = 242
Score = 151 bits (365), Expect = 2e-36
Identities = 63/149 (42%), Positives = 98/149 (65%)
Frame = +3
Query: 162 QNNLAPTLEEEAQFEKLIAPQASDRKHEIIYANLITFAYGHISALYGLYLCFSSAKWATI 341
++++ P ++++ + K E ++ N+I + H+ ALYG+ L + K+ T
Sbjct: 43 EDDIRPDIKDDIYDPTYKDKEGPSPKVEYVWRNIILMSLLHLGALYGITL-IPTCKFYTW 101
Query: 342 IMAYVILIAAEVGVTAGAHRLWTHRAYKAKRPLQIILMVMNSFAFQNSAITWIRDHRMHH 521
+ + +G+TAGAHRLW+HR+YKA+ PL++ L++ N+ AFQN W RDHR HH
Sbjct: 102 LWGVFYYFVSALGITAGAHRLWSHRSYKARLPLRLFLIIANTMAFQNDVYEWARDHRAHH 161
Query: 522 RYSDTDADPHNATRGFFYSHIGWLLVRKH 608
++S+T ADPHN+ RGFF+SH+GWLLVRKH
Sbjct: 162 KFSETHADPHNSRRGFFFSHVGWLLVRKH 190
>AK222862-1|BAD96582.1| 359|Homo sapiens stearoyl-CoA desaturase
variant protein.
Length = 359
Score = 151 bits (365), Expect = 2e-36
Identities = 63/149 (42%), Positives = 98/149 (65%)
Frame = +3
Query: 162 QNNLAPTLEEEAQFEKLIAPQASDRKHEIIYANLITFAYGHISALYGLYLCFSSAKWATI 341
++++ P ++++ + K E ++ N+I + H+ ALYG+ L + K+ T
Sbjct: 43 EDDIRPDIKDDIYDPTYKDKEGPSPKVEYVWRNIILMSLLHLGALYGITL-IPTCKFYTW 101
Query: 342 IMAYVILIAAEVGVTAGAHRLWTHRAYKAKRPLQIILMVMNSFAFQNSAITWIRDHRMHH 521
+ + +G+TAGAHRLW+HR+YKA+ PL++ L++ N+ AFQN W RDHR HH
Sbjct: 102 LWGVFYYFVSALGITAGAHRLWSHRSYKARLPLRLFLIIANTMAFQNDVYEWARDHRAHH 161
Query: 522 RYSDTDADPHNATRGFFYSHIGWLLVRKH 608
++S+T ADPHN+ RGFF+SH+GWLLVRKH
Sbjct: 162 KFSETHADPHNSRRGFFFSHVGWLLVRKH 190
>AF097514-1|AAD29870.1| 359|Homo sapiens stearoyl-CoA desaturase
protein.
Length = 359
Score = 151 bits (365), Expect = 2e-36
Identities = 63/149 (42%), Positives = 98/149 (65%)
Frame = +3
Query: 162 QNNLAPTLEEEAQFEKLIAPQASDRKHEIIYANLITFAYGHISALYGLYLCFSSAKWATI 341
++++ P ++++ + K E ++ N+I + H+ ALYG+ L + K+ T
Sbjct: 43 EDDIRPDIKDDIYDPTYKDKEGPSPKVEYVWRNIILMSLLHLGALYGITL-IPTCKFYTW 101
Query: 342 IMAYVILIAAEVGVTAGAHRLWTHRAYKAKRPLQIILMVMNSFAFQNSAITWIRDHRMHH 521
+ + +G+TAGAHRLW+HR+YKA+ PL++ L++ N+ AFQN W RDHR HH
Sbjct: 102 LWGVFYYFVSALGITAGAHRLWSHRSYKARLPLRLFLIIANTMAFQNDVYEWARDHRAHH 161
Query: 522 RYSDTDADPHNATRGFFYSHIGWLLVRKH 608
++S+T ADPHN+ RGFF+SH+GWLLVRKH
Sbjct: 162 KFSETHADPHNSRRGFFFSHVGWLLVRKH 190
>AB208982-1|BAD92219.1| 366|Homo sapiens stearoyl-CoA desaturase
variant protein.
Length = 366
Score = 151 bits (365), Expect = 2e-36
Identities = 63/149 (42%), Positives = 98/149 (65%)
Frame = +3
Query: 162 QNNLAPTLEEEAQFEKLIAPQASDRKHEIIYANLITFAYGHISALYGLYLCFSSAKWATI 341
++++ P ++++ + K E ++ N+I + H+ ALYG+ L + K+ T
Sbjct: 50 EDDIRPDIKDDIYDPTYKDKEGPSPKVEYVWRNIILMSLLHLGALYGITL-IPTCKFYTW 108
Query: 342 IMAYVILIAAEVGVTAGAHRLWTHRAYKAKRPLQIILMVMNSFAFQNSAITWIRDHRMHH 521
+ + +G+TAGAHRLW+HR+YKA+ PL++ L++ N+ AFQN W RDHR HH
Sbjct: 109 LWGVFYYFVSALGITAGAHRLWSHRSYKARLPLRLFLIIANTMAFQNDVYEWARDHRAHH 168
Query: 522 RYSDTDADPHNATRGFFYSHIGWLLVRKH 608
++S+T ADPHN+ RGFF+SH+GWLLVRKH
Sbjct: 169 KFSETHADPHNSRRGFFFSHVGWLLVRKH 197
>AB032261-1|BAA93510.1| 359|Homo sapiens stearoyl-CoA desaturase
protein.
Length = 359
Score = 151 bits (365), Expect = 2e-36
Identities = 63/149 (42%), Positives = 98/149 (65%)
Frame = +3
Query: 162 QNNLAPTLEEEAQFEKLIAPQASDRKHEIIYANLITFAYGHISALYGLYLCFSSAKWATI 341
++++ P ++++ + K E ++ N+I + H+ ALYG+ L + K+ T
Sbjct: 43 EDDIRPDIKDDIYDPTYKDKEGPSPKVEYVWRNIILMSLLHLGALYGITL-IPTCKFYTW 101
Query: 342 IMAYVILIAAEVGVTAGAHRLWTHRAYKAKRPLQIILMVMNSFAFQNSAITWIRDHRMHH 521
+ + +G+TAGAHRLW+HR+YKA+ PL++ L++ N+ AFQN W RDHR HH
Sbjct: 102 LWGVFYYFVSALGITAGAHRLWSHRSYKARLPLRLFLIIANTMAFQNDVYEWARDHRAHH 161
Query: 522 RYSDTDADPHNATRGFFYSHIGWLLVRKH 608
++S+T ADPHN+ RGFF+SH+GWLLVRKH
Sbjct: 162 KFSETHADPHNSRRGFFFSHVGWLLVRKH 190
>BC004936-1|AAH04936.1| 132|Homo sapiens SCD5 protein protein.
Length = 132
Score = 88.6 bits (210), Expect = 1e-17
Identities = 48/121 (39%), Positives = 70/121 (57%)
Frame = +3
Query: 126 TDIYRTPIMEAKQNNLAPTLEEEAQFEKLIAPQASDRKHEIIYANLITFAYGHISALYGL 305
TD + P +AK+ + LE P A ++ I++ N++ + H+ A+Y L
Sbjct: 6 TDAGKIPFCDAKEE-IRAGLESSEGGGGPERPGARGQRQNIVWRNVVLMSLLHLGAVYSL 64
Query: 306 YLCFSSAKWATIIMAYVILIAAEVGVTAGAHRLWTHRAYKAKRPLQIILMVMNSFAFQNS 485
L AK T++ AY + A +GVTAGAHRLW+HR+Y+AK PL+I L V NS AFQ +
Sbjct: 65 VL-IPKAKPLTLLWAYFCFLLAALGVTAGAHRLWSHRSYRAKLPLRIFLAVANSMAFQAA 123
Query: 486 A 488
A
Sbjct: 124 A 124
>L08240-1|AAA59593.1| 651|Homo sapiens MG81 protein.
Length = 651
Score = 31.5 bits (68), Expect = 2.4
Identities = 19/57 (33%), Positives = 27/57 (47%)
Frame = +2
Query: 395 PSTLDPPGVQSQEATADHTNGNELVRLPKLGHHLDPGPSDAPQIQRHGRRPSQRYQR 565
PS+ PP Q T D G+ L++ ++G DPG S P + G P Q + R
Sbjct: 523 PSSSSPPSTQEASPTGDMAVGSPLMQ--EVGSPKDPGKS-LPPVPPMGLPPPQEFGR 576
>BC125088-1|AAI25089.1| 688|Homo sapiens TBC1 domain family, member
25 protein.
Length = 688
Score = 31.5 bits (68), Expect = 2.4
Identities = 19/57 (33%), Positives = 27/57 (47%)
Frame = +2
Query: 395 PSTLDPPGVQSQEATADHTNGNELVRLPKLGHHLDPGPSDAPQIQRHGRRPSQRYQR 565
PS+ PP Q T D G+ L++ ++G DPG S P + G P Q + R
Sbjct: 560 PSSSSPPSTQEASPTGDMAVGSPLMQ--EVGSPKDPGKS-LPPVPPMGLPPPQEFGR 613
>BC101819-1|AAI01820.1| 688|Homo sapiens TBC1 domain family, member
25 protein.
Length = 688
Score = 31.5 bits (68), Expect = 2.4
Identities = 19/57 (33%), Positives = 27/57 (47%)
Frame = +2
Query: 395 PSTLDPPGVQSQEATADHTNGNELVRLPKLGHHLDPGPSDAPQIQRHGRRPSQRYQR 565
PS+ PP Q T D G+ L++ ++G DPG S P + G P Q + R
Sbjct: 560 PSSSSPPSTQEASPTGDMAVGSPLMQ--EVGSPKDPGKS-LPPVPPMGLPPPQEFGR 613
>BC101817-1|AAI01818.1| 688|Homo sapiens TBC1 domain family, member
25 protein.
Length = 688
Score = 31.5 bits (68), Expect = 2.4
Identities = 19/57 (33%), Positives = 27/57 (47%)
Frame = +2
Query: 395 PSTLDPPGVQSQEATADHTNGNELVRLPKLGHHLDPGPSDAPQIQRHGRRPSQRYQR 565
PS+ PP Q T D G+ L++ ++G DPG S P + G P Q + R
Sbjct: 560 PSSSSPPSTQEASPTGDMAVGSPLMQ--EVGSPKDPGKS-LPPVPPMGLPPPQEFGR 613
>BC026050-1|AAH26050.1| 366|Homo sapiens TBC1D25 protein protein.
Length = 366
Score = 31.5 bits (68), Expect = 2.4
Identities = 19/57 (33%), Positives = 27/57 (47%)
Frame = +2
Query: 395 PSTLDPPGVQSQEATADHTNGNELVRLPKLGHHLDPGPSDAPQIQRHGRRPSQRYQR 565
PS+ PP Q T D G+ L++ ++G DPG S P + G P Q + R
Sbjct: 238 PSSSSPPSTQEASPTGDMAVGSPLMQ--EVGSPKDPGKS-LPPVPPMGLPPPQEFGR 291
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,346,166
Number of Sequences: 237096
Number of extensions: 1941853
Number of successful extensions: 5040
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 4959
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5030
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6466646650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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