Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0212
(610 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z95123-2|CAB08356.1| 339|Caenorhabditis elegans Hypothetical pr... 167 4e-42
AF260244-1|AAF97550.1| 339|Caenorhabditis elegans stearoyl-CoA ... 167 4e-42
AF260243-1|AAF97549.1| 338|Caenorhabditis elegans stearoyl-CoA ... 165 3e-41
AF022972-8|AAC48239.1| 338|Caenorhabditis elegans Fatty acid de... 165 3e-41
Z82073-6|CAB04924.1| 333|Caenorhabditis elegans Hypothetical pr... 157 6e-39
AF260242-1|AAF97548.1| 333|Caenorhabditis elegans palmitoyl-CoA... 157 6e-39
Z99281-37|CAJ44244.1| 740|Caenorhabditis elegans Hypothetical p... 32 0.28
AY611485-1|AAT37524.1| 740|Caenorhabditis elegans epidermal gro... 32 0.28
Z83128-6|CAB05638.2| 353|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z68107-1|CAA92132.1| 264|Caenorhabditis elegans Hypothetical pr... 27 7.9
AF024499-2|AAT48621.1| 576|Caenorhabditis elegans Hypothetical ... 27 7.9
AF024499-1|AAT48620.1| 941|Caenorhabditis elegans Hypothetical ... 27 7.9
AC006810-7|AAK84622.2| 333|Caenorhabditis elegans Serpentine re... 27 7.9
>Z95123-2|CAB08356.1| 339|Caenorhabditis elegans Hypothetical
protein VZK822L.1 protein.
Length = 339
Score = 167 bits (407), Expect = 4e-42
Identities = 67/124 (54%), Positives = 91/124 (73%)
Frame = +3
Query: 237 KHEIIYANLITFAYGHISALYGLYLCFSSAKWATIIMAYVILIAAEVGVTAGAHRLWTHR 416
K EI++ N+ FA H +A GLY AKW T+I +++ + G+TAGAHRLW+H+
Sbjct: 44 KMEIVWRNVALFAALHFAAAIGLYQLIFEAKWQTVIFTFLLYVFGGFGITAGAHRLWSHK 103
Query: 417 AYKAKRPLQIILMVMNSFAFQNSAITWIRDHRMHHRYSDTDADPHNATRGFFYSHIGWLL 596
+YKA P++I LM++N+ A QN I W RDHR HH+++DTDADPHN TRGFF++H+GWLL
Sbjct: 104 SYKATTPMRIFLMILNNIALQNDVIEWARDHRCHHKWTDTDADPHNTTRGFFFAHMGWLL 163
Query: 597 VRKH 608
VRKH
Sbjct: 164 VRKH 167
>AF260244-1|AAF97550.1| 339|Caenorhabditis elegans stearoyl-CoA
desaturase FAT-6 protein.
Length = 339
Score = 167 bits (407), Expect = 4e-42
Identities = 67/124 (54%), Positives = 91/124 (73%)
Frame = +3
Query: 237 KHEIIYANLITFAYGHISALYGLYLCFSSAKWATIIMAYVILIAAEVGVTAGAHRLWTHR 416
K EI++ N+ FA H +A GLY AKW T+I +++ + G+TAGAHRLW+H+
Sbjct: 44 KMEIVWRNVALFAALHFAAAIGLYQLIFEAKWQTVIFTFLLYVFGGFGITAGAHRLWSHK 103
Query: 417 AYKAKRPLQIILMVMNSFAFQNSAITWIRDHRMHHRYSDTDADPHNATRGFFYSHIGWLL 596
+YKA P++I LM++N+ A QN I W RDHR HH+++DTDADPHN TRGFF++H+GWLL
Sbjct: 104 SYKATTPMRIFLMILNNIALQNDVIEWARDHRCHHKWTDTDADPHNTTRGFFFAHMGWLL 163
Query: 597 VRKH 608
VRKH
Sbjct: 164 VRKH 167
>AF260243-1|AAF97549.1| 338|Caenorhabditis elegans stearoyl-CoA
desaturase FAT-7 protein.
Length = 338
Score = 165 bits (400), Expect = 3e-41
Identities = 66/124 (53%), Positives = 92/124 (74%)
Frame = +3
Query: 237 KHEIIYANLITFAYGHISALYGLYLCFSSAKWATIIMAYVILIAAEVGVTAGAHRLWTHR 416
K EI++ N+ FA H++A GLY AKW T + ++ + + + G+TAGAHRLW+H+
Sbjct: 43 KMEIVWRNVALFAALHVAAAIGLYELVFHAKWQTAVFSFALYVFSGFGITAGAHRLWSHK 102
Query: 417 AYKAKRPLQIILMVMNSFAFQNSAITWIRDHRMHHRYSDTDADPHNATRGFFYSHIGWLL 596
+YKA P++I LM++N+ A QN I W RDHR HH+++DTDADPHN TRGFF++H+GWLL
Sbjct: 103 SYKATTPMRIFLMLLNNIALQNDIIEWARDHRCHHKWTDTDADPHNTTRGFFFTHMGWLL 162
Query: 597 VRKH 608
VRKH
Sbjct: 163 VRKH 166
>AF022972-8|AAC48239.1| 338|Caenorhabditis elegans Fatty acid
desaturase protein 7 protein.
Length = 338
Score = 165 bits (400), Expect = 3e-41
Identities = 66/124 (53%), Positives = 92/124 (74%)
Frame = +3
Query: 237 KHEIIYANLITFAYGHISALYGLYLCFSSAKWATIIMAYVILIAAEVGVTAGAHRLWTHR 416
K EI++ N+ FA H++A GLY AKW T + ++ + + + G+TAGAHRLW+H+
Sbjct: 43 KMEIVWRNVALFAALHVAAAIGLYELVFHAKWQTAVFSFALYVFSGFGITAGAHRLWSHK 102
Query: 417 AYKAKRPLQIILMVMNSFAFQNSAITWIRDHRMHHRYSDTDADPHNATRGFFYSHIGWLL 596
+YKA P++I LM++N+ A QN I W RDHR HH+++DTDADPHN TRGFF++H+GWLL
Sbjct: 103 SYKATTPMRIFLMLLNNIALQNDIIEWARDHRCHHKWTDTDADPHNTTRGFFFTHMGWLL 162
Query: 597 VRKH 608
VRKH
Sbjct: 163 VRKH 166
>Z82073-6|CAB04924.1| 333|Caenorhabditis elegans Hypothetical
protein W06D12.3 protein.
Length = 333
Score = 157 bits (381), Expect = 6e-39
Identities = 72/146 (49%), Positives = 94/146 (64%)
Frame = +3
Query: 171 LAPTLEEEAQFEKLIAPQASDRKHEIIYANLITFAYGHISALYGLYLCFSSAKWATIIMA 350
LA L E Q ++ Q K EI++ N+ F HI AL GLY AKWAT+
Sbjct: 15 LAADLNEIRQMQEESKKQVI--KMEIVWKNVALFVALHIGALVGLYQLVFQAKWATVGWV 72
Query: 351 YVILIAAEVGVTAGAHRLWTHRAYKAKRPLQIILMVMNSFAFQNSAITWIRDHRMHHRYS 530
+++ +GVT GAHRLW HRAYKA ++ LM++NS AFQN I W RDHR HH+++
Sbjct: 73 FLLHTLGSMGVTGGAHRLWAHRAYKATLSWRVFLMLINSIAFQNDIIDWARDHRCHHKWT 132
Query: 531 DTDADPHNATRGFFYSHIGWLLVRKH 608
DTDADPH+ RG F++H+GWLLV+KH
Sbjct: 133 DTDADPHSTNRGMFFAHMGWLLVKKH 158
>AF260242-1|AAF97548.1| 333|Caenorhabditis elegans palmitoyl-CoA
fatty acid desaturaseFAT-5 protein.
Length = 333
Score = 157 bits (381), Expect = 6e-39
Identities = 72/146 (49%), Positives = 94/146 (64%)
Frame = +3
Query: 171 LAPTLEEEAQFEKLIAPQASDRKHEIIYANLITFAYGHISALYGLYLCFSSAKWATIIMA 350
LA L E Q ++ Q K EI++ N+ F HI AL GLY AKWAT+
Sbjct: 15 LAADLNEIRQMQEESKKQVI--KMEIVWKNVALFVALHIGALVGLYQLVFQAKWATVGWV 72
Query: 351 YVILIAAEVGVTAGAHRLWTHRAYKAKRPLQIILMVMNSFAFQNSAITWIRDHRMHHRYS 530
+++ +GVT GAHRLW HRAYKA ++ LM++NS AFQN I W RDHR HH+++
Sbjct: 73 FLLHTLGSMGVTGGAHRLWAHRAYKATLSWRVFLMLINSIAFQNDIIDWARDHRCHHKWT 132
Query: 531 DTDADPHNATRGFFYSHIGWLLVRKH 608
DTDADPH+ RG F++H+GWLLV+KH
Sbjct: 133 DTDADPHSTNRGMFFAHMGWLLVKKH 158
>Z99281-37|CAJ44244.1| 740|Caenorhabditis elegans Hypothetical
protein Y57G11C.24h protein.
Length = 740
Score = 32.3 bits (70), Expect = 0.28
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
Frame = +2
Query: 413 PGVQSQEATADHTNGNELVRLPKLGHHLDPG--PSDAPQI--QRHGRRPSQRY 559
P Q Q A+ +H N + GHH PG P DAP +R G+R RY
Sbjct: 687 PFEQQQYASPNHHNNSSSTGGYNNGHHQGPGMLPEDAPSYVKERQGKRGEFRY 739
>AY611485-1|AAT37524.1| 740|Caenorhabditis elegans epidermal growth
factor receptorpathway substrate 8 splice variant B
protein.
Length = 740
Score = 32.3 bits (70), Expect = 0.28
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
Frame = +2
Query: 413 PGVQSQEATADHTNGNELVRLPKLGHHLDPG--PSDAPQI--QRHGRRPSQRY 559
P Q Q A+ +H N + GHH PG P DAP +R G+R RY
Sbjct: 687 PFEQQQYASPNHHNNSSSTGGYNNGHHQGPGMLPEDAPSYVKERQGKRGEFRY 739
>Z83128-6|CAB05638.2| 353|Caenorhabditis elegans Hypothetical
protein W01D2.4 protein.
Length = 353
Score = 28.7 bits (61), Expect = 3.4
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Frame = -2
Query: 168 CFVSLPLSGSDKCLY--YPH*LTNVAIITMAIIIY 70
C+ P+ G D LY YPH + N A+ II+Y
Sbjct: 182 CWFFDPMIGKDASLYHSYPHSINNFAVGICTIILY 216
>Z68107-1|CAA92132.1| 264|Caenorhabditis elegans Hypothetical
protein F48C5.1 protein.
Length = 264
Score = 27.5 bits (58), Expect = 7.9
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = -3
Query: 503 PDPSDGRVLEGERVHYH*YDLQWPLGFVRPVGPESMGACRHSDLCRYQYDVGH 345
P S L+GE+ H P GF G E M +C+H+D C + GH
Sbjct: 108 PGMSASYRLKGEKKHI------LPEGFRYCYG-EEMASCKHADQCLVETSTGH 153
>AF024499-2|AAT48621.1| 576|Caenorhabditis elegans Hypothetical
protein F42G2.4b protein.
Length = 576
Score = 27.5 bits (58), Expect = 7.9
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +1
Query: 25 NSKAINLREKNIKVIINYYRHCYNGYV 105
N+K INLR + + ++ HC + YV
Sbjct: 434 NAKEINLRNFFVSIPFEHFSHCESAYV 460
>AF024499-1|AAT48620.1| 941|Caenorhabditis elegans Hypothetical
protein F42G2.4a protein.
Length = 941
Score = 27.5 bits (58), Expect = 7.9
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +1
Query: 25 NSKAINLREKNIKVIINYYRHCYNGYV 105
N+K INLR + + ++ HC + YV
Sbjct: 434 NAKEINLRNFFVSIPFEHFSHCESAYV 460
>AC006810-7|AAK84622.2| 333|Caenorhabditis elegans Serpentine
receptor, class t protein40 protein.
Length = 333
Score = 27.5 bits (58), Expect = 7.9
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Frame = -2
Query: 153 PLSGSDKCLYY---PH*LTNVAIITMAIIIYDDFYIFLS 46
PL D+ L Y PH + N +++T+ I+Y F I ++
Sbjct: 185 PLIFPDRNLEYFNRPHTINNFSVVTLTCIVYTPFRIIIA 223
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,766,319
Number of Sequences: 27780
Number of extensions: 291881
Number of successful extensions: 805
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 778
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 805
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1311096392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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