Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0210
         (332 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    21   2.6  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   2.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   3.4  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   4.5  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   4.5  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    20   5.9  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    20   5.9  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    20   7.8  

>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 21.4 bits (43), Expect = 2.6
 Identities = 7/23 (30%), Positives = 12/23 (52%)
 Frame = +3

Query: 69  KWETIYQLVLSMSAPGILNWVLP 137
           KWE +   +  +  PG+ +W  P
Sbjct: 52  KWEDVMADIERVIMPGVTHWHSP 74


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.4 bits (43), Expect = 2.6
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = -3

Query: 144 LLPAKPSLVYPVPTSITQAGKWSPIFII*SLLFNYIDIK 28
           L+  K   ++P PTS+T+       F   S+ FN  D K
Sbjct: 63  LVCGKYGALWPQPTSVTKISSTLLKFPYRSIKFNIPDEK 101


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 3.4
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +1

Query: 280 RILCKVSCAPRYRR 321
           R++C V  A RYR+
Sbjct: 176 RVVCYVQAAARYRK 189


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 20.6 bits (41), Expect = 4.5
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -2

Query: 76  SHFYYLKFIIQLYRYKI 26
           S+F+YL +I   Y  K+
Sbjct: 86  SYFFYLSYIYTTYSRKL 102


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory
          receptor candidate 14 protein.
          Length = 374

 Score = 20.6 bits (41), Expect = 4.5
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -2

Query: 76 SHFYYLKFIIQLYRYKI 26
          S+F+YL +I   Y  K+
Sbjct: 42 SYFFYLSYIYTTYSRKL 58


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 20.2 bits (40), Expect = 5.9
 Identities = 11/35 (31%), Positives = 15/35 (42%)
 Frame = +2

Query: 173 IAIKETAKVGDQSTRRMTKAVEDLDFFIGDEAFEA 277
           I+   + K G       TKA  D+D F G    E+
Sbjct: 72  ISSPSSTKSGSPGFLTYTKADRDVDLFRGSSTPES 106


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 20.2 bits (40), Expect = 5.9
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = +2

Query: 149 PQFIIPSTIAIKETAKVGDQSTRRMTKAVEDL 244
           PQ ++PS   +    + G  STR     + DL
Sbjct: 255 PQSLLPSQTGLSPYLRFGCLSTRLFYYQLTDL 286


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 19.8 bits (39), Expect = 7.8
 Identities = 6/17 (35%), Positives = 13/17 (76%)
 Frame = +1

Query: 178 DKRNCKSWRSEYSEDDQ 228
           DK+  K+ + +Y+ED++
Sbjct: 262 DKKKKKTIKEKYTEDEE 278


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,185
Number of Sequences: 336
Number of extensions: 1612
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  6473381
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)