Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0210
(332 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0194 - 1603702-1603782,1603970-1604062,1604203-1604328,160... 82 1e-16
02_04_0473 + 23197294-23197340,23197443-23197680,23197792-231980... 79 1e-15
12_01_0409 - 3230853-3230918,3231372-3231994,3232454-3232847,323... 55 1e-08
11_01_0403 + 3059650-3059709,3059807-3060200,3060275-3060930,306... 55 1e-08
05_01_0047 - 323097-323162,323287-323900,324233-324626,324718-32... 55 1e-08
03_06_0585 - 34912159-34912224,34912634-34913247,34913350-349137... 55 1e-08
01_07_0285 - 42476767-42476832,42476990-42477603,42477821-424782... 55 1e-08
12_02_1282 + 27528159-27529148,27529549-27529614 54 2e-08
10_08_0597 + 19089616-19089675,19089789-19090182,19090451-190910... 53 6e-08
03_05_0926 + 28871800-28871859,28871943-28872336,28872586-288731... 53 6e-08
01_06_1455 + 37504175-37504231,37504357-37504750,37504865-375054... 53 6e-08
05_04_0450 - 21356877-21356942,21357482-21358095,21358173-213585... 52 9e-08
08_02_0441 - 17196352-17196536,17196780-17196906,17198018-171981... 40 6e-04
08_01_0254 + 2078380-2078392,2078487-2078578,2079579-2079698,207... 35 0.018
06_03_0745 + 24109406-24109921 29 1.2
01_01_1170 - 9318332-9318461,9318551-9318613,9318694-9318744,931... 29 1.2
05_03_0359 - 12929240-12929376,12931379-12933497,12933594-129337... 27 2.8
04_03_0743 + 19231835-19232204,19232889-19233061,19233200-192332... 27 4.9
06_03_1457 - 30287185-30287287,30287691-30287759,30288212-302883... 26 8.5
02_04_0129 + 20020388-20021215 26 8.5
01_06_1317 - 36251231-36251341,36252514-36252609,36252879-362529... 26 8.5
>08_01_0194 -
1603702-1603782,1603970-1604062,1604203-1604328,
1604403-1604513,1604989-1605108,1605665-1605757,
1606024-1606157,1606503-1606530,1606821-1607075,
1607167-1607401,1608147-1608193
Length = 440
Score = 81.8 bits (193), Expect = 1e-16
Identities = 43/93 (46%), Positives = 59/93 (63%), Gaps = 11/93 (11%)
Frame = +2
Query: 86 PACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKET-------AKVGDQSTRRMTKAVEDL 244
PA VID GTGY+KLGF+GN EP F IP+ +A+ E+ + + + DL
Sbjct: 7 PAVVIDNGTGYSKLGFSGNSEPCFTIPTVVAVNESFLDQSEMCSSANWIAQYNAGVMADL 66
Query: 245 DFFIGDEA---FEATG-YSVKYPVRHGIVEDWD 331
DFFIGDEA F+++G Y+ K+P+ HG V+DWD
Sbjct: 67 DFFIGDEALSLFKSSGLYTRKHPINHGQVDDWD 99
>02_04_0473 +
23197294-23197340,23197443-23197680,23197792-23198016,
23198616-23198762,23198827-23198961,23199415-23199507,
23199925-23200044,23200303-23200413,23200486-23200611,
23200731-23200829,23201024-23201104
Length = 473
Score = 78.6 bits (185), Expect = 1e-15
Identities = 40/94 (42%), Positives = 56/94 (59%), Gaps = 12/94 (12%)
Frame = +2
Query: 86 PACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKET--------AKVGDQSTRRMTKAVED 241
PA VID GTGYTK+GFAGN EP FI P+ +A+ +T G+ + + D
Sbjct: 7 PAVVIDNGTGYTKMGFAGNVEPCFITPTVVAVNDTFAGQTRANTTKGNWMAQHSAGVMAD 66
Query: 242 LDFFIGDEAF----EATGYSVKYPVRHGIVEDWD 331
LDFFIG++A + Y++ YP+ +G VE+WD
Sbjct: 67 LDFFIGEDALARSRSSNTYNLSYPIHNGQVENWD 100
>12_01_0409 -
3230853-3230918,3231372-3231994,3232454-3232847,
3233000-3233059
Length = 380
Score = 55.2 bits (127), Expect = 1e-08
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Frame = +2
Query: 74 GDHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFF 253
G+ + V D GTG K GFAG+ P+ + PS VG + + D +
Sbjct: 4 GEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSI--------VGRPRHTGVMVGMGQKDAY 55
Query: 254 IGDEAFEATG-YSVKYPVRHGIVEDWD 331
+GDEA G ++KYP+ HGIV +WD
Sbjct: 56 VGDEAQSKRGILTLKYPIEHGIVSNWD 82
>11_01_0403 +
3059650-3059709,3059807-3060200,3060275-3060930,
3060979-3061044
Length = 391
Score = 55.2 bits (127), Expect = 1e-08
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Frame = +2
Query: 74 GDHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFF 253
G+ + V D GTG K GFAG+ P+ + PS VG + + D +
Sbjct: 4 GEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSI--------VGRPRHTGVMVGMGQKDAY 55
Query: 254 IGDEAFEATG-YSVKYPVRHGIVEDWD 331
+GDEA G ++KYP+ HGIV +WD
Sbjct: 56 VGDEAQSKRGILTLKYPIEHGIVSNWD 82
>05_01_0047 -
323097-323162,323287-323900,324233-324626,324718-324777
Length = 377
Score = 55.2 bits (127), Expect = 1e-08
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Frame = +2
Query: 74 GDHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFF 253
G+ + V D GTG K GFAG+ P+ + PS VG + + D +
Sbjct: 4 GEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSI--------VGRPRHTGVMVGMGQKDAY 55
Query: 254 IGDEAFEATG-YSVKYPVRHGIVEDWD 331
+GDEA G ++KYP+ HGIV +WD
Sbjct: 56 VGDEAQSKRGILTLKYPIEHGIVSNWD 82
>03_06_0585 -
34912159-34912224,34912634-34913247,34913350-34913734,
34913824-34913883
Length = 374
Score = 55.2 bits (127), Expect = 1e-08
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Frame = +2
Query: 74 GDHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFF 253
G+ + V D GTG K GFAG+ P+ + PS VG + + D +
Sbjct: 4 GEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSI--------VGRPRHTGVMVGMGQKDAY 55
Query: 254 IGDEAFEATG-YSVKYPVRHGIVEDWD 331
+GDEA G ++KYP+ HGIV +WD
Sbjct: 56 VGDEAQSKRGILTLKYPIEHGIVNNWD 82
>01_07_0285 -
42476767-42476832,42476990-42477603,42477821-42478214,
42478301-42478360
Length = 377
Score = 55.2 bits (127), Expect = 1e-08
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Frame = +2
Query: 74 GDHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFF 253
G+ + V D GTG K GFAG+ P+ + PS VG + + D +
Sbjct: 4 GEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSI--------VGRPRHTGVMVGMGQKDAY 55
Query: 254 IGDEAFEATG-YSVKYPVRHGIVEDWD 331
+GDEA G ++KYP+ HGIV +WD
Sbjct: 56 VGDEAQSKRGILTLKYPIEHGIVSNWD 82
>12_02_1282 + 27528159-27529148,27529549-27529614
Length = 351
Score = 54.4 bits (125), Expect = 2e-08
Identities = 31/86 (36%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Frame = +2
Query: 77 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 256
D + V D GTG K GFAG+ P+ + PS VG + + D ++
Sbjct: 5 DDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSI--------VGRPRHTGVMVGMGQKDAYV 56
Query: 257 GDEAFEATG-YSVKYPVRHGIVEDWD 331
GDEA G ++KYP+ HGIV +WD
Sbjct: 57 GDEAQSKRGILTLKYPIEHGIVNNWD 82
>10_08_0597 +
19089616-19089675,19089789-19090182,19090451-19091064,
19091160-19091225
Length = 377
Score = 52.8 bits (121), Expect = 6e-08
Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Frame = +2
Query: 95 VIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFIGDEAFE 274
V D GTG K GFAG+ P+ + PS VG + + D ++GDEA
Sbjct: 11 VCDNGTGMVKAGFAGDDAPRAVFPSI--------VGRPRHTGVMVGMGQKDAYVGDEAQS 62
Query: 275 ATG-YSVKYPVRHGIVEDWD 331
G ++KYP+ HGIV +WD
Sbjct: 63 KRGILTLKYPIEHGIVSNWD 82
>03_05_0926 +
28871800-28871859,28871943-28872336,28872586-28873199,
28873281-28873346
Length = 377
Score = 52.8 bits (121), Expect = 6e-08
Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Frame = +2
Query: 95 VIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFIGDEAFE 274
V D GTG K GFAG+ P+ + PS VG + + D ++GDEA
Sbjct: 11 VCDNGTGMVKAGFAGDDAPRAVFPSI--------VGRPRHTGVMVGMGQKDAYVGDEAQS 62
Query: 275 ATG-YSVKYPVRHGIVEDWD 331
G ++KYP+ HGIV +WD
Sbjct: 63 KRGILTLKYPIEHGIVSNWD 82
>01_06_1455 +
37504175-37504231,37504357-37504750,37504865-37505478,
37506021-37506086
Length = 376
Score = 52.8 bits (121), Expect = 6e-08
Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Frame = +2
Query: 95 VIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFIGDEAFE 274
V D GTG K GFAG+ P+ + PS VG + + D ++GDEA
Sbjct: 10 VCDNGTGMVKAGFAGDDAPRAVFPSI--------VGRPRHTGVMVGMGQKDAYVGDEAQS 61
Query: 275 ATG-YSVKYPVRHGIVEDWD 331
G ++KYP+ HGIV +WD
Sbjct: 62 KRGILTLKYPIEHGIVNNWD 81
>05_04_0450 -
21356877-21356942,21357482-21358095,21358173-21358566,
21358648-21358704
Length = 376
Score = 52.4 bits (120), Expect = 9e-08
Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Frame = +2
Query: 95 VIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFIGDEAFE 274
V D GTG K GFAG+ P+ + PS VG + + D ++GDEA
Sbjct: 10 VCDNGTGMVKAGFAGDDAPRAVFPSI--------VGRPRHTGVMVGMGQKDAYVGDEAQA 61
Query: 275 ATG-YSVKYPVRHGIVEDWD 331
G ++KYP+ HGIV +WD
Sbjct: 62 KRGILTLKYPIEHGIVNNWD 81
>08_02_0441 -
17196352-17196536,17196780-17196906,17198018-17198101,
17198282-17198348,17198575-17198633,17199211-17199336,
17199406-17199474,17199545-17199653,17199692-17199760,
17199876-17199979,17200518-17200567,17200696-17200774,
17200867-17200938,17201083-17201217,17201311-17201421,
17202088-17202129
Length = 495
Score = 39.5 bits (88), Expect = 6e-04
Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Frame = +2
Query: 95 VIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFIGDEAFE 274
V D GTGY K GFAG P + P + + + ++S + E D +G +
Sbjct: 8 VCDNGTGYVKCGFAGENFPTSVFPCVVG-RPLLRY-EESLQEQ----ELTDIVVGAACAD 61
Query: 275 AT-GYSVKYPVRHGIVEDWD 331
V YPV +GIV+ WD
Sbjct: 62 LRHQLDVSYPVTNGIVQSWD 81
>08_01_0254 +
2078380-2078392,2078487-2078578,2079579-2079698,
2079924-2080097,2080184-2080257,2080847-2080927,
2081306-2081366,2081437-2081486,2082278-2082332,
2082599-2082676,2082757-2082810,2083703-2083756,
2083846-2083906,2084229-2084280,2085118-2085184,
2085393-2085452,2085546-2085608,2085752-2085814,
2086337-2086401,2086620-2086688,2086742-2086847
Length = 503
Score = 34.7 bits (76), Expect = 0.018
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +2
Query: 74 GDHLPACVIDVGTGYTKLGFAGNKEPQFIIPS 169
GD + A VIDVG+ K G+AG+ P+ + PS
Sbjct: 4 GDEVSAIVIDVGSYSCKAGYAGDDTPKAVFPS 35
>06_03_0745 + 24109406-24109921
Length = 171
Score = 28.7 bits (61), Expect = 1.2
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +1
Query: 64 NKNGRPFTSLCYRCRHRVY*TGF-CR*QGTTVYYSINHSDKRNCK 195
N GR + C CR RV TGF CR G +SDK +C+
Sbjct: 102 NPKGREGPNRCSTCRKRVGLTGFNCR-CGNLYCAMHRYSDKHDCQ 145
>01_01_1170 -
9318332-9318461,9318551-9318613,9318694-9318744,
9318837-9318921,9319005-9319068,9319139-9319340,
9319808-9320502
Length = 429
Score = 28.7 bits (61), Expect = 1.2
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 95 VIDVGTGYTKLGFAGNKEPQFIIPSTIA 178
V+D G G K GF G+ P ++P+ +A
Sbjct: 9 VLDNGGGLLKAGFGGDMNPTAVVPNCMA 36
>05_03_0359 -
12929240-12929376,12931379-12933497,12933594-12933773,
12933905-12934118,12934199-12934551,12934642-12934864,
12934953-12935230,12935456-12935725,12935817-12935939,
12936025-12936102,12936351-12936527,12936597-12936686,
12937010-12937120,12937397-12937585,12937667-12937858,
12937990-12938076,12938153-12938257,12938340-12938396,
12938471-12938545,12938647-12938763,12938876-12939000,
12939082-12939121,12939241-12939291,12939382-12939569,
12939808-12939901,12939976-12940149,12940242-12940337,
12940597-12940689,12940794-12940955,12941034-12941240,
12941356-12941728,12942379-12942436,12943096-12943171,
12943874-12943941,12944321-12944642
Length = 2433
Score = 27.5 bits (58), Expect = 2.8
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +2
Query: 164 PSTIAIKETAKVGDQSTRRMTKAV 235
P T+A +ET K +Q+ RR+ KAV
Sbjct: 491 PVTVAPRETVKELEQAARRLAKAV 514
>04_03_0743 +
19231835-19232204,19232889-19233061,19233200-19233297,
19233970-19234107,19234266-19234455,19234875-19235007,
19235095-19236029
Length = 678
Score = 26.6 bits (56), Expect = 4.9
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = -3
Query: 204 SPTFAVSFIAMVDGIINCGSLLPAKPSLVYPVPTSITQAGKWSP 73
SPT+ + + I+NC +LL A S + P T+AG W P
Sbjct: 266 SPTY-IGCGLICPHIVNCSTLLGAIISWGFLWPYISTKAGDWYP 308
>06_03_1457 - 30287185-30287287,30287691-30287759,30288212-30288351,
30288447-30288641,30288743-30289363,30289688-30290257,
30290332-30293638,30293764-30293863,30293978-30295014,
30295256-30295604,30296299-30296374,30296456-30297022,
30297094-30297238,30298281-30298405,30298491-30298582,
30298646-30298828,30298946-30299058,30299499-30299649,
30299720-30299882
Length = 2701
Score = 25.8 bits (54), Expect = 8.5
Identities = 10/37 (27%), Positives = 20/37 (54%)
Frame = +2
Query: 221 MTKAVEDLDFFIGDEAFEATGYSVKYPVRHGIVEDWD 331
M + +ED + +GDE+F ++ P + +DW+
Sbjct: 1823 MLRELEDFNSLLGDESFLEKPFAADDPKFLKLTKDWE 1859
>02_04_0129 + 20020388-20021215
Length = 275
Score = 25.8 bits (54), Expect = 8.5
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
Frame = -3
Query: 168 DGIINCGSLLPAKPSLVYPVPTSITQA---GKWSPI 70
D +L PA+PS++ PVP+++ A G +SP+
Sbjct: 179 DAAAFAAALGPARPSILSPVPSALPPAASSGLFSPL 214
>01_06_1317 -
36251231-36251341,36252514-36252609,36252879-36252956,
36253037-36253138,36254509-36254784
Length = 220
Score = 25.8 bits (54), Expect = 8.5
Identities = 8/23 (34%), Positives = 16/23 (69%)
Frame = +3
Query: 81 IYQLVLSMSAPGILNWVLPVTRN 149
+Y+ ++S+ P L W+ P++RN
Sbjct: 178 VYENLVSVLGPNALCWLCPISRN 200
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,290,527
Number of Sequences: 37544
Number of extensions: 176055
Number of successful extensions: 490
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 467
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 475
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 459426840
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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