Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0210
(332 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U02964-1|AAA03444.1| 376|Anopheles gambiae actin 1D protein. 55 8e-10
U02933-1|AAA56882.1| 376|Anopheles gambiae actin 1D protein. 55 8e-10
U02930-1|AAA56881.1| 376|Anopheles gambiae actin 1D protein. 55 8e-10
CR954256-1|CAJ14142.1| 376|Anopheles gambiae actin protein. 55 8e-10
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi... 23 2.3
AJ441131-3|CAD29632.1| 568|Anopheles gambiae putative apyrase/n... 22 7.0
AJ439398-2|CAD28125.1| 568|Anopheles gambiae putative 5' nucleo... 22 7.0
AF063021-3|AAC16247.1| 484|Anopheles gambiae dopa decarboxylase... 22 7.0
AF063021-2|AAC16249.1| 515|Anopheles gambiae dopa decarboxylase... 22 7.0
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript... 22 7.0
>U02964-1|AAA03444.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 54.8 bits (126), Expect = 8e-10
Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Frame = +2
Query: 77 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 256
+ + A V+D G+G K GFAG+ P+ + PS VG + + + D ++
Sbjct: 4 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYV 55
Query: 257 GDEAFEATG-YSVKYPVRHGIVEDWD 331
GDEA G ++KYP+ HGIV +WD
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWD 81
>U02933-1|AAA56882.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 54.8 bits (126), Expect = 8e-10
Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Frame = +2
Query: 77 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 256
+ + A V+D G+G K GFAG+ P+ + PS VG + + + D ++
Sbjct: 4 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYV 55
Query: 257 GDEAFEATG-YSVKYPVRHGIVEDWD 331
GDEA G ++KYP+ HGIV +WD
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWD 81
>U02930-1|AAA56881.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 54.8 bits (126), Expect = 8e-10
Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Frame = +2
Query: 77 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 256
+ + A V+D G+G K GFAG+ P+ + PS VG + + + D ++
Sbjct: 4 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYV 55
Query: 257 GDEAFEATG-YSVKYPVRHGIVEDWD 331
GDEA G ++KYP+ HGIV +WD
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWD 81
>CR954256-1|CAJ14142.1| 376|Anopheles gambiae actin protein.
Length = 376
Score = 54.8 bits (126), Expect = 8e-10
Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Frame = +2
Query: 77 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 256
D A V+D G+G K GFAG+ P+ + PS VG + + + + D ++
Sbjct: 4 DDAGALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGNKDAYV 55
Query: 257 GDEAFEATG-YSVKYPVRHGIVEDWD 331
GDEA G ++KYP+ HGI+ +WD
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIITNWD 81
>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
channel alpha subunitprotein.
Length = 2139
Score = 23.4 bits (48), Expect = 2.3
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +3
Query: 72 WETIYQLVLSMSAP 113
WE +YQLVL + P
Sbjct: 388 WENLYQLVLRSAGP 401
>AJ441131-3|CAD29632.1| 568|Anopheles gambiae putative
apyrase/nucleotidase protein.
Length = 568
Score = 21.8 bits (44), Expect = 7.0
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = -2
Query: 289 RVSCGFKSFITDEKIQIFDSLG 224
R C F +FITD I F + G
Sbjct: 373 RGECNFGNFITDGYIDYFATEG 394
>AJ439398-2|CAD28125.1| 568|Anopheles gambiae putative 5'
nucleotidase protein.
Length = 568
Score = 21.8 bits (44), Expect = 7.0
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = -2
Query: 289 RVSCGFKSFITDEKIQIFDSLG 224
R C F +FITD I F + G
Sbjct: 373 RGECNFGNFITDGYIDYFATEG 394
>AF063021-3|AAC16247.1| 484|Anopheles gambiae dopa decarboxylase
isoform 2 protein.
Length = 484
Score = 21.8 bits (44), Expect = 7.0
Identities = 8/23 (34%), Positives = 12/23 (52%)
Frame = +3
Query: 69 KWETIYQLVLSMSAPGILNWVLP 137
KWE + V + PG+ +W P
Sbjct: 62 KWEEVMADVERVIMPGVTHWHSP 84
>AF063021-2|AAC16249.1| 515|Anopheles gambiae dopa decarboxylase
isoform 1 protein.
Length = 515
Score = 21.8 bits (44), Expect = 7.0
Identities = 8/23 (34%), Positives = 12/23 (52%)
Frame = +3
Query: 69 KWETIYQLVLSMSAPGILNWVLP 137
KWE + V + PG+ +W P
Sbjct: 93 KWEEVMADVERVIMPGVTHWHSP 115
>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
protein.
Length = 1209
Score = 21.8 bits (44), Expect = 7.0
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = -2
Query: 301 RILYRVSCGFKSFIT 257
+ L+RVSC KSF++
Sbjct: 806 KFLHRVSCILKSFLS 820
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 367,164
Number of Sequences: 2352
Number of extensions: 6737
Number of successful extensions: 15
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 23342418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -