Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0210
(332 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY051859-1|AAK93283.1| 418|Drosophila melanogaster LD35711p pro... 165 2e-41
AE014296-1370|AAF50488.1| 418|Drosophila melanogaster CG7558-PA... 165 2e-41
X71789-1|CAA50674.1| 418|Drosophila melanogaster actin related ... 163 7e-41
X12452-1|CAA30982.1| 376|Drosophila melanogaster 87E actin prot... 56 1e-08
K00674-1|AAA28320.1| 376|Drosophila melanogaster protein ( D.me... 56 1e-08
K00673-1|AAA28319.1| 376|Drosophila melanogaster protein ( D.me... 56 1e-08
BT016152-1|AAV37037.1| 376|Drosophila melanogaster AT14584p pro... 56 1e-08
AY089587-1|AAL90325.1| 376|Drosophila melanogaster RE14441p pro... 56 1e-08
AE014297-1691|AAN13567.1| 376|Drosophila melanogaster CG18290-P... 56 1e-08
AE014297-1690|AAF54950.2| 376|Drosophila melanogaster CG18290-P... 56 1e-08
AE013599-3086|AAF46640.1| 376|Drosophila melanogaster CG10067-P... 56 1e-08
X06383-1|CAA29681.1| 84|Drosophila melanogaster protein ( Dros... 55 3e-08
M18830-1|AAA28321.1| 376|Drosophila melanogaster protein ( D.me... 55 3e-08
M18829-1|AAA28318.1| 376|Drosophila melanogaster protein ( D.me... 55 3e-08
M18827-1|AAA28317.1| 376|Drosophila melanogaster protein ( D.me... 55 3e-08
M18826-1|AAA28323.1| 376|Drosophila melanogaster protein ( D.me... 55 3e-08
K00670-1|AAA28314.1| 376|Drosophila melanogaster protein ( D.me... 55 3e-08
K00667-1|AAA28316.1| 376|Drosophila melanogaster protein ( D.me... 55 3e-08
AY118907-1|AAM50767.1| 376|Drosophila melanogaster LD18090p pro... 55 3e-08
AY118735-1|AAM50595.1| 376|Drosophila melanogaster GH04529p pro... 55 3e-08
AY089562-1|AAL90300.1| 376|Drosophila melanogaster RE02927p pro... 55 3e-08
AE014298-815|AAX52480.1| 376|Drosophila melanogaster CG4027-PD,... 55 3e-08
AE014298-814|AAX52479.1| 376|Drosophila melanogaster CG4027-PC,... 55 3e-08
AE014298-813|AAN09154.1| 376|Drosophila melanogaster CG4027-PB,... 55 3e-08
AE014298-812|AAF46098.1| 376|Drosophila melanogaster CG4027-PA,... 55 3e-08
AE014297-2046|AAF55198.1| 376|Drosophila melanogaster CG5178-PA... 55 3e-08
AE014296-3645|AAF51800.1| 376|Drosophila melanogaster CG7478-PA... 55 3e-08
AE013599-130|AAF57294.1| 376|Drosophila melanogaster CG12051-PA... 55 3e-08
AB003910-1|BAA20058.1| 376|Drosophila melanogaster actin protein. 55 3e-08
X78486-1|CAA55238.1| 395|Drosophila melanogaster actin related ... 52 1e-07
AY061256-1|AAL28804.1| 394|Drosophila melanogaster LD18955p pro... 52 1e-07
AE014298-2420|AAF48621.1| 394|Drosophila melanogaster CG9901-PA... 52 1e-07
X78488-1|CAA55240.1| 376|Drosophila melanogaster actin related ... 51 3e-07
AY070666-1|AAL48137.1| 376|Drosophila melanogaster RH04757p pro... 51 3e-07
AE014297-1571|AAF54853.1| 376|Drosophila melanogaster CG6174-PA... 51 3e-07
AY089535-1|AAL90273.1| 360|Drosophila melanogaster LD04994p pro... 44 5e-05
BT023874-1|AAZ86795.1| 368|Drosophila melanogaster AT26678p pro... 44 6e-05
AE013599-2340|AAF57954.1| 376|Drosophila melanogaster CG5409-PA... 44 6e-05
X78487-1|CAA55239.1| 376|Drosophila melanogaster actin related ... 43 8e-05
AY051833-1|AAK93257.1| 378|Drosophila melanogaster LD33759p pro... 40 8e-04
AE014298-2904|AAF48994.1| 378|Drosophila melanogaster CG12235-P... 40 8e-04
AY113405-1|AAM29410.1| 341|Drosophila melanogaster RE12057p pro... 35 0.022
AY070886-1|AAL48508.1| 425|Drosophila melanogaster LD29458p pro... 31 0.48
AE013599-2461|AAF57868.1| 425|Drosophila melanogaster CG6546-PA... 31 0.48
U06460-1|AAC46481.1| 704|Drosophila melanogaster transcription ... 29 1.9
AY051960-1|AAK93384.1| 704|Drosophila melanogaster LD42828p pro... 29 1.9
AE013599-1190|AAF58737.1| 704|Drosophila melanogaster CG7704-PA... 29 1.9
BT023838-1|AAZ86759.1| 455|Drosophila melanogaster LD13915p pro... 27 5.9
AE013599-2015|AAF58167.1| 441|Drosophila melanogaster CG8090-PA... 27 5.9
AY071306-1|AAL48928.1| 469|Drosophila melanogaster RE33302p pro... 27 7.8
AE014297-965|AAF54397.1| 469|Drosophila melanogaster CG9386-PA ... 27 7.8
>AY051859-1|AAK93283.1| 418|Drosophila melanogaster LD35711p
protein.
Length = 418
Score = 165 bits (400), Expect = 2e-41
Identities = 72/87 (82%), Positives = 81/87 (93%)
Frame = +2
Query: 71 MGDHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDF 250
M LPACVIDVGTGY+KLGFAGNKEPQFIIPS IAIKE+A+VGD +TRR+TK +EDLDF
Sbjct: 1 MAGRLPACVIDVGTGYSKLGFAGNKEPQFIIPSAIAIKESARVGDTNTRRITKGIEDLDF 60
Query: 251 FIGDEAFEATGYSVKYPVRHGIVEDWD 331
FIGDEAF+ATGYS+KYPVRHG+VEDWD
Sbjct: 61 FIGDEAFDATGYSIKYPVRHGLVEDWD 87
>AE014296-1370|AAF50488.1| 418|Drosophila melanogaster CG7558-PA
protein.
Length = 418
Score = 165 bits (400), Expect = 2e-41
Identities = 72/87 (82%), Positives = 81/87 (93%)
Frame = +2
Query: 71 MGDHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDF 250
M LPACVIDVGTGY+KLGFAGNKEPQFIIPS IAIKE+A+VGD +TRR+TK +EDLDF
Sbjct: 1 MAGRLPACVIDVGTGYSKLGFAGNKEPQFIIPSAIAIKESARVGDTNTRRITKGIEDLDF 60
Query: 251 FIGDEAFEATGYSVKYPVRHGIVEDWD 331
FIGDEAF+ATGYS+KYPVRHG+VEDWD
Sbjct: 61 FIGDEAFDATGYSIKYPVRHGLVEDWD 87
>X71789-1|CAA50674.1| 418|Drosophila melanogaster actin related
protein protein.
Length = 418
Score = 163 bits (395), Expect = 7e-41
Identities = 71/87 (81%), Positives = 80/87 (91%)
Frame = +2
Query: 71 MGDHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDF 250
M LPACVIDVGTGY+KLGFAGNKEPQFIIPS IAIKE+A+VGD +TRR+TK +EDLDF
Sbjct: 1 MAGRLPACVIDVGTGYSKLGFAGNKEPQFIIPSAIAIKESARVGDTNTRRITKGIEDLDF 60
Query: 251 FIGDEAFEATGYSVKYPVRHGIVEDWD 331
FIGDEAF+ TGYS+KYPVRHG+VEDWD
Sbjct: 61 FIGDEAFDRTGYSIKYPVRHGLVEDWD 87
>X12452-1|CAA30982.1| 376|Drosophila melanogaster 87E actin
protein.
Length = 376
Score = 56.0 bits (129), Expect = 1e-08
Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Frame = +2
Query: 77 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 256
D + A V+D G+G K GFAG+ P+ + PS VG + + + D ++
Sbjct: 4 DEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYV 55
Query: 257 GDEAFEATG-YSVKYPVRHGIVEDWD 331
GDEA G ++KYP+ HGI+ +WD
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIITNWD 81
>K00674-1|AAA28320.1| 376|Drosophila melanogaster protein (
D.melanogaster actingene, complete cds, locus 87E. ).
Length = 376
Score = 56.0 bits (129), Expect = 1e-08
Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Frame = +2
Query: 77 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 256
D + A V+D G+G K GFAG+ P+ + PS VG + + + D ++
Sbjct: 4 DEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYV 55
Query: 257 GDEAFEATG-YSVKYPVRHGIVEDWD 331
GDEA G ++KYP+ HGI+ +WD
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIITNWD 81
>K00673-1|AAA28319.1| 376|Drosophila melanogaster protein (
D.melanogaster actingene, exon 2, locus 57A. ).
Length = 376
Score = 56.0 bits (129), Expect = 1e-08
Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Frame = +2
Query: 77 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 256
D + A V+D G+G K GFAG+ P+ + PS VG + + + D ++
Sbjct: 4 DEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYV 55
Query: 257 GDEAFEATG-YSVKYPVRHGIVEDWD 331
GDEA G ++KYP+ HGI+ +WD
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIITNWD 81
>BT016152-1|AAV37037.1| 376|Drosophila melanogaster AT14584p
protein.
Length = 376
Score = 56.0 bits (129), Expect = 1e-08
Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Frame = +2
Query: 77 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 256
D + A V+D G+G K GFAG+ P+ + PS VG + + + D ++
Sbjct: 4 DEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYV 55
Query: 257 GDEAFEATG-YSVKYPVRHGIVEDWD 331
GDEA G ++KYP+ HGI+ +WD
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIITNWD 81
>AY089587-1|AAL90325.1| 376|Drosophila melanogaster RE14441p
protein.
Length = 376
Score = 56.0 bits (129), Expect = 1e-08
Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Frame = +2
Query: 77 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 256
D + A V+D G+G K GFAG+ P+ + PS VG + + + D ++
Sbjct: 4 DEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYV 55
Query: 257 GDEAFEATG-YSVKYPVRHGIVEDWD 331
GDEA G ++KYP+ HGI+ +WD
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIITNWD 81
>AE014297-1691|AAN13567.1| 376|Drosophila melanogaster CG18290-PB,
isoform B protein.
Length = 376
Score = 56.0 bits (129), Expect = 1e-08
Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Frame = +2
Query: 77 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 256
D + A V+D G+G K GFAG+ P+ + PS VG + + + D ++
Sbjct: 4 DEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYV 55
Query: 257 GDEAFEATG-YSVKYPVRHGIVEDWD 331
GDEA G ++KYP+ HGI+ +WD
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIITNWD 81
>AE014297-1690|AAF54950.2| 376|Drosophila melanogaster CG18290-PA,
isoform A protein.
Length = 376
Score = 56.0 bits (129), Expect = 1e-08
Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Frame = +2
Query: 77 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 256
D + A V+D G+G K GFAG+ P+ + PS VG + + + D ++
Sbjct: 4 DEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYV 55
Query: 257 GDEAFEATG-YSVKYPVRHGIVEDWD 331
GDEA G ++KYP+ HGI+ +WD
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIITNWD 81
>AE013599-3086|AAF46640.1| 376|Drosophila melanogaster CG10067-PA,
isoform A protein.
Length = 376
Score = 56.0 bits (129), Expect = 1e-08
Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Frame = +2
Query: 77 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 256
D + A V+D G+G K GFAG+ P+ + PS VG + + + D ++
Sbjct: 4 DEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYV 55
Query: 257 GDEAFEATG-YSVKYPVRHGIVEDWD 331
GDEA G ++KYP+ HGI+ +WD
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIITNWD 81
>X06383-1|CAA29681.1| 84|Drosophila melanogaster protein (
Drosophila 5C actingene exon 2 and exon 3 (part.). ).
Length = 84
Score = 54.8 bits (126), Expect = 3e-08
Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Frame = +2
Query: 77 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 256
+ + A V+D G+G K GFAG+ P+ + PS VG + + + D ++
Sbjct: 4 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYV 55
Query: 257 GDEAFEATG-YSVKYPVRHGIVEDWD 331
GDEA G ++KYP+ HGIV +WD
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWD 81
>M18830-1|AAA28321.1| 376|Drosophila melanogaster protein (
D.melanogaster actingene, complete cds, locus 88F. ).
Length = 376
Score = 54.8 bits (126), Expect = 3e-08
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Frame = +2
Query: 77 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 256
D A VID G+G K GFAG+ P+ + PS VG + + + D ++
Sbjct: 4 DDAGALVIDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYV 55
Query: 257 GDEAFEATG-YSVKYPVRHGIVEDWD 331
GDEA G ++KYP+ HGI+ +WD
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIITNWD 81
>M18829-1|AAA28318.1| 376|Drosophila melanogaster protein (
D.melanogaster actingene, complete cds, locus 79B. ).
Length = 376
Score = 54.8 bits (126), Expect = 3e-08
Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Frame = +2
Query: 89 ACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFIGDEA 268
A V+D G+G K GFAG+ P+ + PS VG + + + D ++GDEA
Sbjct: 8 ALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDCYVGDEA 59
Query: 269 FEATG-YSVKYPVRHGIVEDWD 331
G S+KYP+ HGI+ +WD
Sbjct: 60 QSKRGILSLKYPIEHGIITNWD 81
>M18827-1|AAA28317.1| 376|Drosophila melanogaster protein (
D.melanogaster actingene, exon 2, locus 79B. ).
Length = 376
Score = 54.8 bits (126), Expect = 3e-08
Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Frame = +2
Query: 89 ACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFIGDEA 268
A V+D G+G K GFAG+ P+ + PS VG + + + D ++GDEA
Sbjct: 8 ALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDCYVGDEA 59
Query: 269 FEATG-YSVKYPVRHGIVEDWD 331
G S+KYP+ HGI+ +WD
Sbjct: 60 QSKRGILSLKYPIEHGIITNWD 81
>M18826-1|AAA28323.1| 376|Drosophila melanogaster protein (
D.melanogaster actingene, complete cds, locus 88F. ).
Length = 376
Score = 54.8 bits (126), Expect = 3e-08
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Frame = +2
Query: 77 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 256
D A VID G+G K GFAG+ P+ + PS VG + + + D ++
Sbjct: 4 DDAGALVIDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYV 55
Query: 257 GDEAFEATG-YSVKYPVRHGIVEDWD 331
GDEA G ++KYP+ HGI+ +WD
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIITNWD 81
>K00670-1|AAA28314.1| 376|Drosophila melanogaster protein (
D.melanogaster actingene, complete cds, locus 42A. ).
Length = 376
Score = 54.8 bits (126), Expect = 3e-08
Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Frame = +2
Query: 77 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 256
+ + A V+D G+G K GFAG+ P+ + PS VG + + + D ++
Sbjct: 4 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYV 55
Query: 257 GDEAFEATG-YSVKYPVRHGIVEDWD 331
GDEA G ++KYP+ HGIV +WD
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWD 81
>K00667-1|AAA28316.1| 376|Drosophila melanogaster protein (
D.melanogaster actingene, complete cds, locus 5C. ).
Length = 376
Score = 54.8 bits (126), Expect = 3e-08
Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Frame = +2
Query: 77 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 256
+ + A V+D G+G K GFAG+ P+ + PS VG + + + D ++
Sbjct: 4 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYV 55
Query: 257 GDEAFEATG-YSVKYPVRHGIVEDWD 331
GDEA G ++KYP+ HGIV +WD
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWD 81
>AY118907-1|AAM50767.1| 376|Drosophila melanogaster LD18090p
protein.
Length = 376
Score = 54.8 bits (126), Expect = 3e-08
Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Frame = +2
Query: 77 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 256
+ + A V+D G+G K GFAG+ P+ + PS VG + + + D ++
Sbjct: 4 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYV 55
Query: 257 GDEAFEATG-YSVKYPVRHGIVEDWD 331
GDEA G ++KYP+ HGIV +WD
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWD 81
>AY118735-1|AAM50595.1| 376|Drosophila melanogaster GH04529p
protein.
Length = 376
Score = 54.8 bits (126), Expect = 3e-08
Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Frame = +2
Query: 89 ACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFIGDEA 268
A V+D G+G K GFAG+ P+ + PS VG + + + D ++GDEA
Sbjct: 8 ALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDCYVGDEA 59
Query: 269 FEATG-YSVKYPVRHGIVEDWD 331
G S+KYP+ HGI+ +WD
Sbjct: 60 QSKRGILSLKYPIEHGIITNWD 81
>AY089562-1|AAL90300.1| 376|Drosophila melanogaster RE02927p
protein.
Length = 376
Score = 54.8 bits (126), Expect = 3e-08
Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Frame = +2
Query: 77 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 256
+ + A V+D G+G K GFAG+ P+ + PS VG + + + D ++
Sbjct: 4 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYV 55
Query: 257 GDEAFEATG-YSVKYPVRHGIVEDWD 331
GDEA G ++KYP+ HGIV +WD
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWD 81
>AE014298-815|AAX52480.1| 376|Drosophila melanogaster CG4027-PD,
isoform D protein.
Length = 376
Score = 54.8 bits (126), Expect = 3e-08
Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Frame = +2
Query: 77 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 256
+ + A V+D G+G K GFAG+ P+ + PS VG + + + D ++
Sbjct: 4 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYV 55
Query: 257 GDEAFEATG-YSVKYPVRHGIVEDWD 331
GDEA G ++KYP+ HGIV +WD
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWD 81
>AE014298-814|AAX52479.1| 376|Drosophila melanogaster CG4027-PC,
isoform C protein.
Length = 376
Score = 54.8 bits (126), Expect = 3e-08
Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Frame = +2
Query: 77 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 256
+ + A V+D G+G K GFAG+ P+ + PS VG + + + D ++
Sbjct: 4 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYV 55
Query: 257 GDEAFEATG-YSVKYPVRHGIVEDWD 331
GDEA G ++KYP+ HGIV +WD
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWD 81
>AE014298-813|AAN09154.1| 376|Drosophila melanogaster CG4027-PB,
isoform B protein.
Length = 376
Score = 54.8 bits (126), Expect = 3e-08
Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Frame = +2
Query: 77 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 256
+ + A V+D G+G K GFAG+ P+ + PS VG + + + D ++
Sbjct: 4 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYV 55
Query: 257 GDEAFEATG-YSVKYPVRHGIVEDWD 331
GDEA G ++KYP+ HGIV +WD
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWD 81
>AE014298-812|AAF46098.1| 376|Drosophila melanogaster CG4027-PA,
isoform A protein.
Length = 376
Score = 54.8 bits (126), Expect = 3e-08
Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Frame = +2
Query: 77 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 256
+ + A V+D G+G K GFAG+ P+ + PS VG + + + D ++
Sbjct: 4 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYV 55
Query: 257 GDEAFEATG-YSVKYPVRHGIVEDWD 331
GDEA G ++KYP+ HGIV +WD
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWD 81
>AE014297-2046|AAF55198.1| 376|Drosophila melanogaster CG5178-PA
protein.
Length = 376
Score = 54.8 bits (126), Expect = 3e-08
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Frame = +2
Query: 77 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 256
D A VID G+G K GFAG+ P+ + PS VG + + + D ++
Sbjct: 4 DDAGALVIDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYV 55
Query: 257 GDEAFEATG-YSVKYPVRHGIVEDWD 331
GDEA G ++KYP+ HGI+ +WD
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIITNWD 81
>AE014296-3645|AAF51800.1| 376|Drosophila melanogaster CG7478-PA
protein.
Length = 376
Score = 54.8 bits (126), Expect = 3e-08
Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Frame = +2
Query: 89 ACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFIGDEA 268
A V+D G+G K GFAG+ P+ + PS VG + + + D ++GDEA
Sbjct: 8 ALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDCYVGDEA 59
Query: 269 FEATG-YSVKYPVRHGIVEDWD 331
G S+KYP+ HGI+ +WD
Sbjct: 60 QSKRGILSLKYPIEHGIITNWD 81
>AE013599-130|AAF57294.1| 376|Drosophila melanogaster CG12051-PA
protein.
Length = 376
Score = 54.8 bits (126), Expect = 3e-08
Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Frame = +2
Query: 77 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 256
+ + A V+D G+G K GFAG+ P+ + PS VG + + + D ++
Sbjct: 4 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYV 55
Query: 257 GDEAFEATG-YSVKYPVRHGIVEDWD 331
GDEA G ++KYP+ HGIV +WD
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWD 81
>AB003910-1|BAA20058.1| 376|Drosophila melanogaster actin protein.
Length = 376
Score = 54.8 bits (126), Expect = 3e-08
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Frame = +2
Query: 77 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 256
D A VID G+G K GFAG+ P+ + PS VG + + + D ++
Sbjct: 4 DDAGALVIDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYV 55
Query: 257 GDEAFEATG-YSVKYPVRHGIVEDWD 331
GDEA G ++KYP+ HGI+ +WD
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIITNWD 81
>X78486-1|CAA55238.1| 395|Drosophila melanogaster actin related
protein protein.
Length = 395
Score = 52.4 bits (120), Expect = 1e-07
Identities = 30/83 (36%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Frame = +2
Query: 95 VIDVGTGYTKLGFAGNKEPQFIIPSTIA---IKETAKVGDQSTRRMTKAVEDLDFFIGDE 265
V D GTG+ K G+AG+ P I PS + I+ K+GD +E D +GDE
Sbjct: 11 VCDNGTGFVKCGYAGSNFPTHIFPSMVGRPMIRAVNKIGD---------IEVKDLMVGDE 61
Query: 266 AFEATG-YSVKYPVRHGIVEDWD 331
A + V YP+ +G+V +WD
Sbjct: 62 ASQLRSLLEVSYPMENGVVRNWD 84
>AY061256-1|AAL28804.1| 394|Drosophila melanogaster LD18955p
protein.
Length = 394
Score = 52.4 bits (120), Expect = 1e-07
Identities = 30/83 (36%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Frame = +2
Query: 95 VIDVGTGYTKLGFAGNKEPQFIIPSTIA---IKETAKVGDQSTRRMTKAVEDLDFFIGDE 265
V D GTG+ K G+AG+ P I PS + I+ K+GD +E D +GDE
Sbjct: 10 VCDNGTGFVKCGYAGSNFPTHIFPSMVGRPMIRAVNKIGD---------IEVKDLMVGDE 60
Query: 266 AFEATG-YSVKYPVRHGIVEDWD 331
A + V YP+ +G+V +WD
Sbjct: 61 ASQLRSLLEVSYPMENGVVRNWD 83
>AE014298-2420|AAF48621.1| 394|Drosophila melanogaster CG9901-PA
protein.
Length = 394
Score = 52.4 bits (120), Expect = 1e-07
Identities = 30/83 (36%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Frame = +2
Query: 95 VIDVGTGYTKLGFAGNKEPQFIIPSTIA---IKETAKVGDQSTRRMTKAVEDLDFFIGDE 265
V D GTG+ K G+AG+ P I PS + I+ K+GD +E D +GDE
Sbjct: 10 VCDNGTGFVKCGYAGSNFPTHIFPSMVGRPMIRAVNKIGD---------IEVKDLMVGDE 60
Query: 266 AFEATG-YSVKYPVRHGIVEDWD 331
A + V YP+ +G+V +WD
Sbjct: 61 ASQLRSLLEVSYPMENGVVRNWD 83
>X78488-1|CAA55240.1| 376|Drosophila melanogaster actin related
protein protein.
Length = 376
Score = 51.2 bits (117), Expect = 3e-07
Identities = 32/80 (40%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Frame = +2
Query: 95 VIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFIGDEAFE 274
VID G+G K GFAG P+ P+ I + +V M A+E D F+G +A E
Sbjct: 13 VIDNGSGVIKAGFAGEHIPKCRFPNYIGRPKHVRV-------MAGALEG-DIFVGPKAEE 64
Query: 275 ATGY-SVKYPVRHGIVEDWD 331
G S++YP+ HGIV DW+
Sbjct: 65 HRGLLSIRYPMEHGIVTDWN 84
>AY070666-1|AAL48137.1| 376|Drosophila melanogaster RH04757p
protein.
Length = 376
Score = 51.2 bits (117), Expect = 3e-07
Identities = 32/80 (40%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Frame = +2
Query: 95 VIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFIGDEAFE 274
VID G+G K GFAG P+ P+ I + +V M A+E D F+G +A E
Sbjct: 13 VIDNGSGVIKAGFAGEHIPKCRFPNYIGRPKHVRV-------MAGALEG-DIFVGPKAEE 64
Query: 275 ATGY-SVKYPVRHGIVEDWD 331
G S++YP+ HGIV DW+
Sbjct: 65 HRGLLSIRYPMEHGIVTDWN 84
>AE014297-1571|AAF54853.1| 376|Drosophila melanogaster CG6174-PA
protein.
Length = 376
Score = 51.2 bits (117), Expect = 3e-07
Identities = 32/80 (40%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Frame = +2
Query: 95 VIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFIGDEAFE 274
VID G+G K GFAG P+ P+ I + +V M A+E D F+G +A E
Sbjct: 13 VIDNGSGVIKAGFAGEHIPKCRFPNYIGRPKHVRV-------MAGALEG-DIFVGPKAEE 64
Query: 275 ATGY-SVKYPVRHGIVEDWD 331
G S++YP+ HGIV DW+
Sbjct: 65 HRGLLSIRYPMEHGIVTDWN 84
>AY089535-1|AAL90273.1| 360|Drosophila melanogaster LD04994p
protein.
Length = 360
Score = 44.0 bits (99), Expect = 5e-05
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = +2
Query: 122 KLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFIGDEAFEATGY-SVKY 298
K GFAG+ P+ + PS VG + + + D ++GDEA G ++KY
Sbjct: 3 KAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKY 54
Query: 299 PVRHGIVEDWD 331
P+ HGI+ +WD
Sbjct: 55 PIEHGIITNWD 65
>BT023874-1|AAZ86795.1| 368|Drosophila melanogaster AT26678p
protein.
Length = 368
Score = 43.6 bits (98), Expect = 6e-05
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Frame = +2
Query: 80 HLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFIG 259
H A VID G+G K GF+ P+ + PS + V + +V D IG
Sbjct: 2 HHAAVVIDNGSGVCKAGFSPEDTPRAVFPSIVGRPRHLNV-------LLDSVIG-DSVIG 53
Query: 260 DEAFEATG-YSVKYPVRHGIVEDWD 331
+ A G ++KYP+ HG+V++WD
Sbjct: 54 EAAARKRGILTLKYPIEHGMVKNWD 78
>AE013599-2340|AAF57954.1| 376|Drosophila melanogaster CG5409-PA
protein.
Length = 376
Score = 43.6 bits (98), Expect = 6e-05
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Frame = +2
Query: 80 HLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFIG 259
H A VID G+G K GF+ P+ + PS + V + +V D IG
Sbjct: 10 HHAAVVIDNGSGVCKAGFSPEDTPRAVFPSIVGRPRHLNV-------LLDSVIG-DSVIG 61
Query: 260 DEAFEATG-YSVKYPVRHGIVEDWD 331
+ A G ++KYP+ HG+V++WD
Sbjct: 62 EAAARKRGILTLKYPIEHGMVKNWD 86
>X78487-1|CAA55239.1| 376|Drosophila melanogaster actin related
protein protein.
Length = 376
Score = 43.2 bits (97), Expect = 8e-05
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Frame = +2
Query: 80 HLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFIG 259
H A VID G+G K GF+ P+ + PS + V + +V D IG
Sbjct: 10 HHAAVVIDNGSGVCKAGFSPEDTPRAVFPSIVGRPRHLNV-------LLDSVIG-DSVIG 61
Query: 260 DEAFEATG-YSVKYPVRHGIVEDWD 331
+ E G ++KYP+ HG+V++WD
Sbjct: 62 ERQPEKRGILTLKYPIEHGMVKNWD 86
>AY051833-1|AAK93257.1| 378|Drosophila melanogaster LD33759p
protein.
Length = 378
Score = 39.9 bits (89), Expect = 8e-04
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +2
Query: 86 PACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKET 190
P V+D+GT YTKLGFA P+ I+P+ + + T
Sbjct: 12 PPIVLDIGTAYTKLGFAAEAYPRKIMPTEVVMTTT 46
>AE014298-2904|AAF48994.1| 378|Drosophila melanogaster CG12235-PA
protein.
Length = 378
Score = 39.9 bits (89), Expect = 8e-04
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +2
Query: 86 PACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKET 190
P V+D+GT YTKLGFA P+ I+P+ + + T
Sbjct: 12 PPIVLDIGTAYTKLGFAAEAYPRKIMPTEVVMTTT 46
>AY113405-1|AAM29410.1| 341|Drosophila melanogaster RE12057p
protein.
Length = 341
Score = 35.1 bits (77), Expect = 0.022
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +2
Query: 77 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTI 175
D + A V+D G+G K GFAG+ P+ + PS +
Sbjct: 4 DEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 36
>AY070886-1|AAL48508.1| 425|Drosophila melanogaster LD29458p
protein.
Length = 425
Score = 30.7 bits (66), Expect = 0.48
Identities = 21/93 (22%), Positives = 40/93 (43%), Gaps = 7/93 (7%)
Frame = +2
Query: 74 GDHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVG-DQSTRRMTKA----VE 238
GD + A V D G ++G+A P+ IPS + I + D T+ A +
Sbjct: 10 GDEIGALVFDPGHHSLRVGYAQEDSPKAEIPSVVGIGAAPETNLDPETKTDNNATPNNAD 69
Query: 239 DLDFFIGDE--AFEATGYSVKYPVRHGIVEDWD 331
F++ + V+ ++ G++++WD
Sbjct: 70 QRKFYVDTNYVTVPRSNMEVQTYMKDGMIDNWD 102
>AE013599-2461|AAF57868.1| 425|Drosophila melanogaster CG6546-PA
protein.
Length = 425
Score = 30.7 bits (66), Expect = 0.48
Identities = 21/93 (22%), Positives = 40/93 (43%), Gaps = 7/93 (7%)
Frame = +2
Query: 74 GDHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVG-DQSTRRMTKA----VE 238
GD + A V D G ++G+A P+ IPS + I + D T+ A +
Sbjct: 10 GDEIGALVFDPGHHSLRVGYAQEDSPKAEIPSVVGIGAAPETNLDPETKTDNNATPNNAD 69
Query: 239 DLDFFIGDE--AFEATGYSVKYPVRHGIVEDWD 331
F++ + V+ ++ G++++WD
Sbjct: 70 QRKFYVDTNYVTVPRSNMEVQTYMKDGMIDNWD 102
>U06460-1|AAC46481.1| 704|Drosophila melanogaster transcription
initiation factorTFIID 85 kDa subunit protein.
Length = 704
Score = 28.7 bits (61), Expect = 1.9
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = +2
Query: 179 IKETAKVGDQSTRRMTKAVEDLDFFIGDEAFEATGYSVKYPVRHGIVED 325
++ A+ QS A E+L FI D++F+A Y Y VED
Sbjct: 81 VQSPAQGHKQSAVTEANAAEELAKFIDDDSFDAQHYEQAYKELRTFVED 129
>AY051960-1|AAK93384.1| 704|Drosophila melanogaster LD42828p
protein.
Length = 704
Score = 28.7 bits (61), Expect = 1.9
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = +2
Query: 179 IKETAKVGDQSTRRMTKAVEDLDFFIGDEAFEATGYSVKYPVRHGIVED 325
++ A+ QS A E+L FI D++F+A Y Y VED
Sbjct: 81 VQSPAQGHKQSAVTEANAAEELAKFIDDDSFDAQHYEQAYKELRTFVED 129
>AE013599-1190|AAF58737.1| 704|Drosophila melanogaster CG7704-PA
protein.
Length = 704
Score = 28.7 bits (61), Expect = 1.9
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = +2
Query: 179 IKETAKVGDQSTRRMTKAVEDLDFFIGDEAFEATGYSVKYPVRHGIVED 325
++ A+ QS A E+L FI D++F+A Y Y VED
Sbjct: 81 VQSPAQGHKQSAVTEANAAEELAKFIDDDSFDAQHYEQAYKELRTFVED 129
>BT023838-1|AAZ86759.1| 455|Drosophila melanogaster LD13915p
protein.
Length = 455
Score = 27.1 bits (57), Expect = 5.9
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 5/68 (7%)
Frame = -2
Query: 322 FYDTVAHRILYRVSCGFKSFITDEKIQIFDSLGHP-PST----LIANFCSFFYRYG*WNN 158
+++ + H + V C +K F+ I IFD +G P T + ++C F + WN
Sbjct: 284 YFNVLGH--FFSVYCVYKIFMCCINI-IFDRVGRKDPVTRGLEIAIHWCGFNIDFAFWNQ 340
Query: 157 KLWFLVTG 134
+ FL+ G
Sbjct: 341 HISFLLVG 348
>AE013599-2015|AAF58167.1| 441|Drosophila melanogaster CG8090-PA
protein.
Length = 441
Score = 27.1 bits (57), Expect = 5.9
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 5/68 (7%)
Frame = -2
Query: 322 FYDTVAHRILYRVSCGFKSFITDEKIQIFDSLGHP-PST----LIANFCSFFYRYG*WNN 158
+++ + H + V C +K F+ I IFD +G P T + ++C F + WN
Sbjct: 270 YFNVLGH--FFSVYCVYKIFMCCINI-IFDRVGRKDPVTRGLEIAIHWCGFNIDFAFWNQ 326
Query: 157 KLWFLVTG 134
+ FL+ G
Sbjct: 327 HISFLLVG 334
>AY071306-1|AAL48928.1| 469|Drosophila melanogaster RE33302p
protein.
Length = 469
Score = 26.6 bits (56), Expect = 7.8
Identities = 15/35 (42%), Positives = 24/35 (68%)
Frame = +2
Query: 161 IPSTIAIKETAKVGDQSTRRMTKAVEDLDFFIGDE 265
IPST K A +G + R+ +KA+EDL++F+ +E
Sbjct: 299 IPST---KRLALLGIK--RKASKAIEDLEYFVQEE 328
>AE014297-965|AAF54397.1| 469|Drosophila melanogaster CG9386-PA
protein.
Length = 469
Score = 26.6 bits (56), Expect = 7.8
Identities = 15/35 (42%), Positives = 24/35 (68%)
Frame = +2
Query: 161 IPSTIAIKETAKVGDQSTRRMTKAVEDLDFFIGDE 265
IPST K A +G + R+ +KA+EDL++F+ +E
Sbjct: 299 IPST---KRLALLGIK--RKASKAIEDLEYFVQEE 328
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,388,550
Number of Sequences: 53049
Number of extensions: 292759
Number of successful extensions: 712
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 669
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 677
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 735339255
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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