BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0210
(332 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 120 3e-28
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 56 5e-09
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 56 5e-09
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 56 5e-09
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 56 5e-09
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 56 5e-09
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 56 5e-09
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 56 5e-09
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 56 5e-09
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 56 5e-09
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 56 6e-09
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 56 6e-09
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 56 6e-09
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 55 1e-08
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 49 9e-07
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 48 1e-06
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 43 5e-05
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 39 0.001
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 38 0.002
AF039041-2|AAP46270.1| 587|Caenorhabditis elegans Hypothetical ... 26 5.7
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 26 7.5
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 26 7.5
Z74045-4|CAA98554.2| 924|Caenorhabditis elegans Hypothetical pr... 25 10.0
Z74032-11|CAA98469.2| 924|Caenorhabditis elegans Hypothetical p... 25 10.0
Z71258-4|CAA95783.2| 423|Caenorhabditis elegans Hypothetical pr... 25 10.0
AL132862-27|CAB60564.1| 682|Caenorhabditis elegans Hypothetical... 25 10.0
AC084153-1|AAK84596.1| 385|Caenorhabditis elegans Hypothetical ... 25 10.0
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 120 bits (289), Expect = 3e-28
Identities = 59/89 (66%), Positives = 68/89 (76%), Gaps = 6/89 (6%)
Frame = +2
Query: 83 LPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKE-TAKVGDQSTR---RMTKAVEDLDF 250
LPACVID GTGYTKLG+AGN EPQFIIPS IA+K+ A Q+ R R+ ++DLDF
Sbjct: 6 LPACVIDNGTGYTKLGYAGNTEPQFIIPSAIAVKDKVASSNSQAMRWNNRVGAGIDDLDF 65
Query: 251 FIGDEAFE--ATGYSVKYPVRHGIVEDWD 331
FIGDEA AT Y+VKYP+RHGIVEDWD
Sbjct: 66 FIGDEALSPAATNYTVKYPIRHGIVEDWD 94
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 56.4 bits (130), Expect = 5e-09
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Frame = +2
Query: 71 MGDHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDF 250
M + + A V+D G+G K GFAG+ P+ + PS VG + + + D
Sbjct: 1 MEEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDS 52
Query: 251 FIGDEAFEATG-YSVKYPVRHGIVEDWD 331
++GDEA G ++KYP+ HGIV +WD
Sbjct: 53 YVGDEAQSKRGILTLKYPIEHGIVTNWD 80
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 56.4 bits (130), Expect = 5e-09
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Frame = +2
Query: 77 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 256
D + A V+D G+G K GFAG+ P+ + PS VG + + + D ++
Sbjct: 4 DEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYV 55
Query: 257 GDEAFEATG-YSVKYPVRHGIVEDWD 331
GDEA G ++KYP+ HGIV +WD
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWD 81
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 56.4 bits (130), Expect = 5e-09
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Frame = +2
Query: 77 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 256
D + A V+D G+G K GFAG+ P+ + PS VG + + + D ++
Sbjct: 4 DEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYV 55
Query: 257 GDEAFEATG-YSVKYPVRHGIVEDWD 331
GDEA G ++KYP+ HGIV +WD
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWD 81
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 56.4 bits (130), Expect = 5e-09
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Frame = +2
Query: 77 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 256
D + A V+D G+G K GFAG+ P+ + PS VG + + + D ++
Sbjct: 4 DEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYV 55
Query: 257 GDEAFEATG-YSVKYPVRHGIVEDWD 331
GDEA G ++KYP+ HGIV +WD
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWD 81
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 56.4 bits (130), Expect = 5e-09
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Frame = +2
Query: 77 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 256
D + A V+D G+G K GFAG+ P+ + PS VG + + + D ++
Sbjct: 4 DEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYV 55
Query: 257 GDEAFEATG-YSVKYPVRHGIVEDWD 331
GDEA G ++KYP+ HGIV +WD
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWD 81
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 56.4 bits (130), Expect = 5e-09
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Frame = +2
Query: 77 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 256
D + A V+D G+G K GFAG+ P+ + PS VG + + + D ++
Sbjct: 4 DEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYV 55
Query: 257 GDEAFEATG-YSVKYPVRHGIVEDWD 331
GDEA G ++KYP+ HGIV +WD
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWD 81
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 56.4 bits (130), Expect = 5e-09
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Frame = +2
Query: 77 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 256
D + A V+D G+G K GFAG+ P+ + PS VG + + + D ++
Sbjct: 4 DEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYV 55
Query: 257 GDEAFEATG-YSVKYPVRHGIVEDWD 331
GDEA G ++KYP+ HGIV +WD
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWD 81
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 56.4 bits (130), Expect = 5e-09
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Frame = +2
Query: 77 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 256
D + A V+D G+G K GFAG+ P+ + PS VG + + + D ++
Sbjct: 4 DEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYV 55
Query: 257 GDEAFEATG-YSVKYPVRHGIVEDWD 331
GDEA G ++KYP+ HGIV +WD
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWD 81
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 56.4 bits (130), Expect = 5e-09
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Frame = +2
Query: 77 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 256
D + A V+D G+G K GFAG+ P+ + PS VG + + + D ++
Sbjct: 4 DEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYV 55
Query: 257 GDEAFEATG-YSVKYPVRHGIVEDWD 331
GDEA G ++KYP+ HGIV +WD
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWD 81
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 56.0 bits (129), Expect = 6e-09
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Frame = +2
Query: 77 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 256
D + A V+D G+G K GFAG+ P+ + PS VG + + + D ++
Sbjct: 4 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYV 55
Query: 257 GDEAFEATG-YSVKYPVRHGIVEDWD 331
GDEA G ++KYP+ HGIV +WD
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWD 81
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 56.0 bits (129), Expect = 6e-09
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Frame = +2
Query: 77 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 256
D + A V+D G+G K GFAG+ P+ + PS VG + + + D ++
Sbjct: 4 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYV 55
Query: 257 GDEAFEATG-YSVKYPVRHGIVEDWD 331
GDEA G ++KYP+ HGIV +WD
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWD 81
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 56.0 bits (129), Expect = 6e-09
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Frame = +2
Query: 77 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 256
D + A V+D G+G K GFAG+ P+ + PS VG + + + D ++
Sbjct: 4 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYV 55
Query: 257 GDEAFEATG-YSVKYPVRHGIVEDWD 331
GDEA G ++KYP+ HGIV +WD
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWD 81
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 55.2 bits (127), Expect = 1e-08
Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Frame = +2
Query: 77 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 256
D + A ++D G+G K GFAG+ P+ + PS VG + + + D ++
Sbjct: 4 DDVAALILDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYV 55
Query: 257 GDEAFEATG-YSVKYPVRHGIVEDWD 331
GDEA G ++KYP+ HGIV +WD
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWD 81
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 48.8 bits (111), Expect = 9e-07
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Frame = +2
Query: 95 VIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFIGDEAFE 274
VID G+G K GFAG ++P+ ++ VG R+ D D FIG +A
Sbjct: 12 VIDNGSGVIKAGFAGEQQPK--------VRFANFVGRPKYHRVMAGGLDGDIFIGPKAES 63
Query: 275 ATG-YSVKYPVRHGIVEDW 328
G +S++YP+ HGIV +W
Sbjct: 64 NRGLFSIEYPMEHGIVNNW 82
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 48.4 bits (110), Expect = 1e-06
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Frame = +2
Query: 95 VIDVGTGYTKLGFAGNKEPQFIIPSTIA---IKETAKVGDQSTRRMTKAVEDLDFFIGDE 265
V+D GTG+ K G+AG P I PS + ++ T +VG+ +E D +G+E
Sbjct: 10 VVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGN---------IEIKDLMVGEE 60
Query: 266 AFEATG-YSVKYPVRHGIVEDWD 331
+ + YP+ +GIV +WD
Sbjct: 61 CSQLRQMLDINYPMDNGIVRNWD 83
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 43.2 bits (97), Expect = 5e-05
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = +2
Query: 122 KLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFIGDEAFEATGY-SVKY 298
+ GFAG+ P+ + PS VG + + + D ++GDEA G ++KY
Sbjct: 5 RAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKY 56
Query: 299 PVRHGIVEDWD 331
P+ HGIV +WD
Sbjct: 57 PIEHGIVTNWD 67
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 38.7 bits (86), Expect = 0.001
Identities = 24/96 (25%), Positives = 46/96 (47%), Gaps = 10/96 (10%)
Frame = +2
Query: 74 GDHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKET--------AKVGDQSTRRMTK 229
GD + V D G+ ++GFAG + P+ IPS IA++E + ++ +
Sbjct: 8 GDEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYIAVQEALPDDTIEKQEAMEEGDNSKVQ 67
Query: 230 AVEDLDFFIGDEAF--EATGYSVKYPVRHGIVEDWD 331
+ +FFIG +++ ++ G++EDW+
Sbjct: 68 TKREKNFFIGTTKIIVPRARTNMESFMKEGLIEDWE 103
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 37.5 bits (83), Expect = 0.002
Identities = 15/30 (50%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Frame = +2
Query: 245 DFFIGDEAFEATGY-SVKYPVRHGIVEDWD 331
D ++GDEA G ++KYP+ HGIV +WD
Sbjct: 8 DSYVGDEAQSKRGILTLKYPIEHGIVTNWD 37
>AF039041-2|AAP46270.1| 587|Caenorhabditis elegans Hypothetical
protein W03F8.10 protein.
Length = 587
Score = 26.2 bits (55), Expect = 5.7
Identities = 10/36 (27%), Positives = 21/36 (58%)
Frame = +2
Query: 140 NKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLD 247
NKE + + + I+E ++ DQ+ +T +E++D
Sbjct: 386 NKEAELLQKAMEEIREALQLADQAYNNVTSVLEEID 421
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 25.8 bits (54), Expect = 7.5
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -3
Query: 174 MVDGIINCGSLLPAKPSLVY 115
+V+ INCG+LL SLVY
Sbjct: 248 LVEARINCGNLLEKDTSLVY 267
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 25.8 bits (54), Expect = 7.5
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -3
Query: 174 MVDGIINCGSLLPAKPSLVY 115
+V+ INCG+LL SLVY
Sbjct: 415 LVEARINCGNLLEKDTSLVY 434
>Z74045-4|CAA98554.2| 924|Caenorhabditis elegans Hypothetical
protein T27F2.2 protein.
Length = 924
Score = 25.4 bits (53), Expect = 10.0
Identities = 7/24 (29%), Positives = 14/24 (58%)
Frame = +1
Query: 160 YSINHSDKRNCKSWRSEYSEDDQG 231
+ + H+D C++W E+S + G
Sbjct: 131 FDMAHTDAHECETWMREHSASEAG 154
>Z74032-11|CAA98469.2| 924|Caenorhabditis elegans Hypothetical
protein T27F2.2 protein.
Length = 924
Score = 25.4 bits (53), Expect = 10.0
Identities = 7/24 (29%), Positives = 14/24 (58%)
Frame = +1
Query: 160 YSINHSDKRNCKSWRSEYSEDDQG 231
+ + H+D C++W E+S + G
Sbjct: 131 FDMAHTDAHECETWMREHSASEAG 154
>Z71258-4|CAA95783.2| 423|Caenorhabditis elegans Hypothetical
protein C01H6.4 protein.
Length = 423
Score = 25.4 bits (53), Expect = 10.0
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +2
Query: 74 GDHLPACVIDVGTGY 118
GDH+PA VI V TGY
Sbjct: 232 GDHVPADVIIVCTGY 246
>AL132862-27|CAB60564.1| 682|Caenorhabditis elegans Hypothetical
protein Y73F8A.35 protein.
Length = 682
Score = 25.4 bits (53), Expect = 10.0
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3
Query: 126 SLVYPVPTSITQAGKWSPIF 67
+L+ P PTSI G + PIF
Sbjct: 29 TLLVPAPTSIQYVGVYQPIF 48
>AC084153-1|AAK84596.1| 385|Caenorhabditis elegans Hypothetical
protein Y22D7AL.7 protein.
Length = 385
Score = 25.4 bits (53), Expect = 10.0
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = +2
Query: 98 IDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVED 241
+D Y G AGN++ + + + +++ A + QS+ MTK E+
Sbjct: 79 VDPRNCYISPGKAGNRDAAALFEAGLRVEKLAGLDMQSSAAMTKNEEN 126
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,110,064
Number of Sequences: 27780
Number of extensions: 160077
Number of successful extensions: 366
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 347
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 349
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 408121444
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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