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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0210
         (332 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024200-9|AAF36012.1|  425|Caenorhabditis elegans Arp2/3 comple...   120   3e-28
Z83241-1|CAB05817.1|  375|Caenorhabditis elegans Hypothetical pr...    56   5e-09
Z81584-6|CAB04678.1|  376|Caenorhabditis elegans Hypothetical pr...    56   5e-09
Z81584-4|CAB04676.1|  376|Caenorhabditis elegans Hypothetical pr...    56   5e-09
X16799-1|CAA34720.1|  376|Caenorhabditis elegans actin protein.        56   5e-09
X16798-1|CAA34719.1|  375|Caenorhabditis elegans actin protein.        56   5e-09
X16796-1|CAA34717.1|  376|Caenorhabditis elegans actin protein.        56   5e-09
U64601-5|AAB04575.1|  376|Caenorhabditis elegans Actin protein 4...    56   5e-09
J01044-1|AAA27889.1|   86|Caenorhabditis elegans protein ( C.ele...    56   5e-09
J01042-1|AAA27887.1|   86|Caenorhabditis elegans protein ( C.ele...    56   5e-09
Z81584-5|CAB04675.1|  376|Caenorhabditis elegans Hypothetical pr...    56   6e-09
J01046-1|AAA27890.1|   86|Caenorhabditis elegans protein ( C.ele...    56   6e-09
J01043-1|AAA27888.1|   83|Caenorhabditis elegans protein ( C.ele...    56   6e-09
X16797-1|CAA34718.1|  376|Caenorhabditis elegans actin protein.        55   1e-08
AL132949-19|CAB70110.2|  374|Caenorhabditis elegans Hypothetical...    49   9e-07
Z71181-1|CAA94894.1|  395|Caenorhabditis elegans Hypothetical pr...    48   1e-06
U64601-6|AAT92068.1|  362|Caenorhabditis elegans Actin protein 4...    43   5e-05
AC006833-3|AAF60947.2|  436|Caenorhabditis elegans Hypothetical ...    39   0.001
U64601-7|AAK77622.1|  332|Caenorhabditis elegans Actin protein 4...    38   0.002
AF039041-2|AAP46270.1|  587|Caenorhabditis elegans Hypothetical ...    26   5.7  
U80447-2|AAO38637.1|  579|Caenorhabditis elegans Hypothetical pr...    26   7.5  
U80447-1|AAB37806.1|  746|Caenorhabditis elegans Hypothetical pr...    26   7.5  
Z74045-4|CAA98554.2|  924|Caenorhabditis elegans Hypothetical pr...    25   10.0 
Z74032-11|CAA98469.2|  924|Caenorhabditis elegans Hypothetical p...    25   10.0 
Z71258-4|CAA95783.2|  423|Caenorhabditis elegans Hypothetical pr...    25   10.0 
AL132862-27|CAB60564.1|  682|Caenorhabditis elegans Hypothetical...    25   10.0 
AC084153-1|AAK84596.1|  385|Caenorhabditis elegans Hypothetical ...    25   10.0 

>AC024200-9|AAF36012.1|  425|Caenorhabditis elegans Arp2/3 complex
           component protein 1 protein.
          Length = 425

 Score =  120 bits (289), Expect = 3e-28
 Identities = 59/89 (66%), Positives = 68/89 (76%), Gaps = 6/89 (6%)
 Frame = +2

Query: 83  LPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKE-TAKVGDQSTR---RMTKAVEDLDF 250
           LPACVID GTGYTKLG+AGN EPQFIIPS IA+K+  A    Q+ R   R+   ++DLDF
Sbjct: 6   LPACVIDNGTGYTKLGYAGNTEPQFIIPSAIAVKDKVASSNSQAMRWNNRVGAGIDDLDF 65

Query: 251 FIGDEAFE--ATGYSVKYPVRHGIVEDWD 331
           FIGDEA    AT Y+VKYP+RHGIVEDWD
Sbjct: 66  FIGDEALSPAATNYTVKYPIRHGIVEDWD 94


>Z83241-1|CAB05817.1|  375|Caenorhabditis elegans Hypothetical
           protein T25C8.2 protein.
          Length = 375

 Score = 56.4 bits (130), Expect = 5e-09
 Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
 Frame = +2

Query: 71  MGDHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDF 250
           M + + A V+D G+G  K GFAG+  P+ + PS         VG    + +   +   D 
Sbjct: 1   MEEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDS 52

Query: 251 FIGDEAFEATG-YSVKYPVRHGIVEDWD 331
           ++GDEA    G  ++KYP+ HGIV +WD
Sbjct: 53  YVGDEAQSKRGILTLKYPIEHGIVTNWD 80


>Z81584-6|CAB04678.1|  376|Caenorhabditis elegans Hypothetical
           protein T04C12.6 protein.
          Length = 376

 Score = 56.4 bits (130), Expect = 5e-09
 Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
 Frame = +2

Query: 77  DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 256
           D + A V+D G+G  K GFAG+  P+ + PS         VG    + +   +   D ++
Sbjct: 4   DEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYV 55

Query: 257 GDEAFEATG-YSVKYPVRHGIVEDWD 331
           GDEA    G  ++KYP+ HGIV +WD
Sbjct: 56  GDEAQSKRGILTLKYPIEHGIVTNWD 81


>Z81584-4|CAB04676.1|  376|Caenorhabditis elegans Hypothetical
           protein T04C12.4 protein.
          Length = 376

 Score = 56.4 bits (130), Expect = 5e-09
 Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
 Frame = +2

Query: 77  DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 256
           D + A V+D G+G  K GFAG+  P+ + PS         VG    + +   +   D ++
Sbjct: 4   DEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYV 55

Query: 257 GDEAFEATG-YSVKYPVRHGIVEDWD 331
           GDEA    G  ++KYP+ HGIV +WD
Sbjct: 56  GDEAQSKRGILTLKYPIEHGIVTNWD 81


>X16799-1|CAA34720.1|  376|Caenorhabditis elegans actin protein.
          Length = 376

 Score = 56.4 bits (130), Expect = 5e-09
 Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
 Frame = +2

Query: 77  DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 256
           D + A V+D G+G  K GFAG+  P+ + PS         VG    + +   +   D ++
Sbjct: 4   DEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYV 55

Query: 257 GDEAFEATG-YSVKYPVRHGIVEDWD 331
           GDEA    G  ++KYP+ HGIV +WD
Sbjct: 56  GDEAQSKRGILTLKYPIEHGIVTNWD 81


>X16798-1|CAA34719.1|  375|Caenorhabditis elegans actin protein.
          Length = 375

 Score = 56.4 bits (130), Expect = 5e-09
 Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
 Frame = +2

Query: 77  DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 256
           D + A V+D G+G  K GFAG+  P+ + PS         VG    + +   +   D ++
Sbjct: 4   DEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYV 55

Query: 257 GDEAFEATG-YSVKYPVRHGIVEDWD 331
           GDEA    G  ++KYP+ HGIV +WD
Sbjct: 56  GDEAQSKRGILTLKYPIEHGIVTNWD 81


>X16796-1|CAA34717.1|  376|Caenorhabditis elegans actin protein.
          Length = 376

 Score = 56.4 bits (130), Expect = 5e-09
 Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
 Frame = +2

Query: 77  DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 256
           D + A V+D G+G  K GFAG+  P+ + PS         VG    + +   +   D ++
Sbjct: 4   DEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYV 55

Query: 257 GDEAFEATG-YSVKYPVRHGIVEDWD 331
           GDEA    G  ++KYP+ HGIV +WD
Sbjct: 56  GDEAQSKRGILTLKYPIEHGIVTNWD 81


>U64601-5|AAB04575.1|  376|Caenorhabditis elegans Actin protein 4,
           isoform a protein.
          Length = 376

 Score = 56.4 bits (130), Expect = 5e-09
 Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
 Frame = +2

Query: 77  DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 256
           D + A V+D G+G  K GFAG+  P+ + PS         VG    + +   +   D ++
Sbjct: 4   DEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYV 55

Query: 257 GDEAFEATG-YSVKYPVRHGIVEDWD 331
           GDEA    G  ++KYP+ HGIV +WD
Sbjct: 56  GDEAQSKRGILTLKYPIEHGIVTNWD 81


>J01044-1|AAA27889.1|   86|Caenorhabditis elegans protein (
           C.elegans (nematode)actin gene III, 5' end. ).
          Length = 86

 Score = 56.4 bits (130), Expect = 5e-09
 Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
 Frame = +2

Query: 77  DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 256
           D + A V+D G+G  K GFAG+  P+ + PS         VG    + +   +   D ++
Sbjct: 4   DEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYV 55

Query: 257 GDEAFEATG-YSVKYPVRHGIVEDWD 331
           GDEA    G  ++KYP+ HGIV +WD
Sbjct: 56  GDEAQSKRGILTLKYPIEHGIVTNWD 81


>J01042-1|AAA27887.1|   86|Caenorhabditis elegans protein (
           C.elegans (nematode)actin gene I, 5' end. ).
          Length = 86

 Score = 56.4 bits (130), Expect = 5e-09
 Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
 Frame = +2

Query: 77  DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 256
           D + A V+D G+G  K GFAG+  P+ + PS         VG    + +   +   D ++
Sbjct: 4   DEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYV 55

Query: 257 GDEAFEATG-YSVKYPVRHGIVEDWD 331
           GDEA    G  ++KYP+ HGIV +WD
Sbjct: 56  GDEAQSKRGILTLKYPIEHGIVTNWD 81


>Z81584-5|CAB04675.1|  376|Caenorhabditis elegans Hypothetical
           protein T04C12.5 protein.
          Length = 376

 Score = 56.0 bits (129), Expect = 6e-09
 Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
 Frame = +2

Query: 77  DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 256
           D + A V+D G+G  K GFAG+  P+ + PS         VG    + +   +   D ++
Sbjct: 4   DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYV 55

Query: 257 GDEAFEATG-YSVKYPVRHGIVEDWD 331
           GDEA    G  ++KYP+ HGIV +WD
Sbjct: 56  GDEAQSKRGILTLKYPIEHGIVTNWD 81


>J01046-1|AAA27890.1|   86|Caenorhabditis elegans protein (
           C.elegans (nematode)actin gene IV, 5' end. ).
          Length = 86

 Score = 56.0 bits (129), Expect = 6e-09
 Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
 Frame = +2

Query: 77  DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 256
           D + A V+D G+G  K GFAG+  P+ + PS         VG    + +   +   D ++
Sbjct: 4   DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYV 55

Query: 257 GDEAFEATG-YSVKYPVRHGIVEDWD 331
           GDEA    G  ++KYP+ HGIV +WD
Sbjct: 56  GDEAQSKRGILTLKYPIEHGIVTNWD 81


>J01043-1|AAA27888.1|   83|Caenorhabditis elegans protein (
           C.elegans (nematode)actin gene II, 5' end. ).
          Length = 83

 Score = 56.0 bits (129), Expect = 6e-09
 Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
 Frame = +2

Query: 77  DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 256
           D + A V+D G+G  K GFAG+  P+ + PS         VG    + +   +   D ++
Sbjct: 4   DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYV 55

Query: 257 GDEAFEATG-YSVKYPVRHGIVEDWD 331
           GDEA    G  ++KYP+ HGIV +WD
Sbjct: 56  GDEAQSKRGILTLKYPIEHGIVTNWD 81


>X16797-1|CAA34718.1|  376|Caenorhabditis elegans actin protein.
          Length = 376

 Score = 55.2 bits (127), Expect = 1e-08
 Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
 Frame = +2

Query: 77  DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 256
           D + A ++D G+G  K GFAG+  P+ + PS         VG    + +   +   D ++
Sbjct: 4   DDVAALILDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYV 55

Query: 257 GDEAFEATG-YSVKYPVRHGIVEDWD 331
           GDEA    G  ++KYP+ HGIV +WD
Sbjct: 56  GDEAQSKRGILTLKYPIEHGIVTNWD 81


>AL132949-19|CAB70110.2|  374|Caenorhabditis elegans Hypothetical
           protein Y53F4B.22 protein.
          Length = 374

 Score = 48.8 bits (111), Expect = 9e-07
 Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
 Frame = +2

Query: 95  VIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFIGDEAFE 274
           VID G+G  K GFAG ++P+        ++    VG     R+     D D FIG +A  
Sbjct: 12  VIDNGSGVIKAGFAGEQQPK--------VRFANFVGRPKYHRVMAGGLDGDIFIGPKAES 63

Query: 275 ATG-YSVKYPVRHGIVEDW 328
             G +S++YP+ HGIV +W
Sbjct: 64  NRGLFSIEYPMEHGIVNNW 82


>Z71181-1|CAA94894.1|  395|Caenorhabditis elegans Hypothetical
           protein K07C5.1 protein.
          Length = 395

 Score = 48.4 bits (110), Expect = 1e-06
 Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
 Frame = +2

Query: 95  VIDVGTGYTKLGFAGNKEPQFIIPSTIA---IKETAKVGDQSTRRMTKAVEDLDFFIGDE 265
           V+D GTG+ K G+AG   P  I PS +    ++ T +VG+         +E  D  +G+E
Sbjct: 10  VVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGN---------IEIKDLMVGEE 60

Query: 266 AFEATG-YSVKYPVRHGIVEDWD 331
             +      + YP+ +GIV +WD
Sbjct: 61  CSQLRQMLDINYPMDNGIVRNWD 83


>U64601-6|AAT92068.1|  362|Caenorhabditis elegans Actin protein 4,
           isoform c protein.
          Length = 362

 Score = 43.2 bits (97), Expect = 5e-05
 Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
 Frame = +2

Query: 122 KLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFIGDEAFEATGY-SVKY 298
           + GFAG+  P+ + PS         VG    + +   +   D ++GDEA    G  ++KY
Sbjct: 5   RAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKY 56

Query: 299 PVRHGIVEDWD 331
           P+ HGIV +WD
Sbjct: 57  PIEHGIVTNWD 67


>AC006833-3|AAF60947.2|  436|Caenorhabditis elegans Hypothetical
           protein ZK616.4 protein.
          Length = 436

 Score = 38.7 bits (86), Expect = 0.001
 Identities = 24/96 (25%), Positives = 46/96 (47%), Gaps = 10/96 (10%)
 Frame = +2

Query: 74  GDHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKET--------AKVGDQSTRRMTK 229
           GD +   V D G+   ++GFAG + P+  IPS IA++E          +  ++      +
Sbjct: 8   GDEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYIAVQEALPDDTIEKQEAMEEGDNSKVQ 67

Query: 230 AVEDLDFFIGDEAF--EATGYSVKYPVRHGIVEDWD 331
              + +FFIG           +++  ++ G++EDW+
Sbjct: 68  TKREKNFFIGTTKIIVPRARTNMESFMKEGLIEDWE 103


>U64601-7|AAK77622.1|  332|Caenorhabditis elegans Actin protein 4,
           isoform b protein.
          Length = 332

 Score = 37.5 bits (83), Expect = 0.002
 Identities = 15/30 (50%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
 Frame = +2

Query: 245 DFFIGDEAFEATGY-SVKYPVRHGIVEDWD 331
           D ++GDEA    G  ++KYP+ HGIV +WD
Sbjct: 8   DSYVGDEAQSKRGILTLKYPIEHGIVTNWD 37


>AF039041-2|AAP46270.1|  587|Caenorhabditis elegans Hypothetical
           protein W03F8.10 protein.
          Length = 587

 Score = 26.2 bits (55), Expect = 5.7
 Identities = 10/36 (27%), Positives = 21/36 (58%)
 Frame = +2

Query: 140 NKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLD 247
           NKE + +  +   I+E  ++ DQ+   +T  +E++D
Sbjct: 386 NKEAELLQKAMEEIREALQLADQAYNNVTSVLEEID 421


>U80447-2|AAO38637.1|  579|Caenorhabditis elegans Hypothetical
           protein F55F8.2b protein.
          Length = 579

 Score = 25.8 bits (54), Expect = 7.5
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -3

Query: 174 MVDGIINCGSLLPAKPSLVY 115
           +V+  INCG+LL    SLVY
Sbjct: 248 LVEARINCGNLLEKDTSLVY 267


>U80447-1|AAB37806.1|  746|Caenorhabditis elegans Hypothetical
           protein F55F8.2a protein.
          Length = 746

 Score = 25.8 bits (54), Expect = 7.5
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -3

Query: 174 MVDGIINCGSLLPAKPSLVY 115
           +V+  INCG+LL    SLVY
Sbjct: 415 LVEARINCGNLLEKDTSLVY 434


>Z74045-4|CAA98554.2|  924|Caenorhabditis elegans Hypothetical
           protein T27F2.2 protein.
          Length = 924

 Score = 25.4 bits (53), Expect = 10.0
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = +1

Query: 160 YSINHSDKRNCKSWRSEYSEDDQG 231
           + + H+D   C++W  E+S  + G
Sbjct: 131 FDMAHTDAHECETWMREHSASEAG 154


>Z74032-11|CAA98469.2|  924|Caenorhabditis elegans Hypothetical
           protein T27F2.2 protein.
          Length = 924

 Score = 25.4 bits (53), Expect = 10.0
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = +1

Query: 160 YSINHSDKRNCKSWRSEYSEDDQG 231
           + + H+D   C++W  E+S  + G
Sbjct: 131 FDMAHTDAHECETWMREHSASEAG 154


>Z71258-4|CAA95783.2|  423|Caenorhabditis elegans Hypothetical
           protein C01H6.4 protein.
          Length = 423

 Score = 25.4 bits (53), Expect = 10.0
 Identities = 11/15 (73%), Positives = 12/15 (80%)
 Frame = +2

Query: 74  GDHLPACVIDVGTGY 118
           GDH+PA VI V TGY
Sbjct: 232 GDHVPADVIIVCTGY 246


>AL132862-27|CAB60564.1|  682|Caenorhabditis elegans Hypothetical
           protein Y73F8A.35 protein.
          Length = 682

 Score = 25.4 bits (53), Expect = 10.0
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -3

Query: 126 SLVYPVPTSITQAGKWSPIF 67
           +L+ P PTSI   G + PIF
Sbjct: 29  TLLVPAPTSIQYVGVYQPIF 48


>AC084153-1|AAK84596.1|  385|Caenorhabditis elegans Hypothetical
           protein Y22D7AL.7 protein.
          Length = 385

 Score = 25.4 bits (53), Expect = 10.0
 Identities = 13/48 (27%), Positives = 25/48 (52%)
 Frame = +2

Query: 98  IDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVED 241
           +D    Y   G AGN++   +  + + +++ A +  QS+  MTK  E+
Sbjct: 79  VDPRNCYISPGKAGNRDAAALFEAGLRVEKLAGLDMQSSAAMTKNEEN 126


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,110,064
Number of Sequences: 27780
Number of extensions: 160077
Number of successful extensions: 366
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 347
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 349
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 408121444
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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