Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0208
         (698 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    46   0.001
UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bomb...    40   0.078
UniRef50_A7QYF9 Cluster: Chromosome chr17 scaffold_246, whole ge...    33   6.7  
UniRef50_Q5C1D6 Cluster: SJCHGC08573 protein; n=1; Schistosoma j...    33   8.9  
UniRef50_A7F3R9 Cluster: Putative uncharacterized protein; n=1; ...    33   8.9  

>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 45.6 bits (103), Expect = 0.001
 Identities = 18/18 (100%), Positives = 18/18 (100%)
 Frame = -2

Query: 364 RWVDELTAHLVLSGYWSP 311
           RWVDELTAHLVLSGYWSP
Sbjct: 158 RWVDELTAHLVLSGYWSP 175



 Score = 33.1 bits (72), Expect = 6.7
 Identities = 16/29 (55%), Positives = 18/29 (62%)
 Frame = -1

Query: 350 AHSPLGVKWLLEPIDIYNVNAPPTLRYKF 264
           AH  L   W   P  +Y+VNAPPT RYKF
Sbjct: 165 AHLVLSGYW--SPRHLYDVNAPPTSRYKF 191


>UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bombyx
           mori (Silk moth)
          Length = 782

 Score = 39.5 bits (88), Expect = 0.078
 Identities = 13/15 (86%), Positives = 14/15 (93%)
 Frame = -2

Query: 181 WWYLPVRTHKRSYHQ 137
           WWYLP RTHKRSYH+
Sbjct: 571 WWYLPARTHKRSYHR 585


>UniRef50_A7QYF9 Cluster: Chromosome chr17 scaffold_246, whole
           genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr17 scaffold_246, whole genome shotgun
           sequence - Vitis vinifera (Grape)
          Length = 49

 Score = 33.1 bits (72), Expect = 6.7
 Identities = 9/20 (45%), Positives = 16/20 (80%)
 Frame = -3

Query: 414 RCYKVAYAIYVFFFYCLDGW 355
           RC+KV++  ++F++YCL  W
Sbjct: 9   RCFKVSFLFFIFWYYCLKFW 28


>UniRef50_Q5C1D6 Cluster: SJCHGC08573 protein; n=1; Schistosoma
           japonicum|Rep: SJCHGC08573 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 146

 Score = 32.7 bits (71), Expect = 8.9
 Identities = 15/41 (36%), Positives = 27/41 (65%)
 Frame = -1

Query: 665 YKGNKKNLNIFNCTI*EDSSRPRASNNMERNSIETYIRSRI 543
           Y+ NKK+ N+ NCT+  D  R  A+  +  +++E Y+RS++
Sbjct: 31  YRENKKHRNMGNCTVYSD-GRCYAARVINLDALERYLRSQV 70


>UniRef50_A7F3R9 Cluster: Putative uncharacterized protein; n=1;
           Sclerotinia sclerotiorum 1980|Rep: Putative
           uncharacterized protein - Sclerotinia sclerotiorum 1980
          Length = 448

 Score = 32.7 bits (71), Expect = 8.9
 Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 2/78 (2%)
 Frame = -3

Query: 546 YLIRATRFALYLQTLVADVIKPIGFEDDIT--GESKKELFHIAHHIRCYKVAYAIYVFFF 373
           YLI  T     L  ++  V  P   ED +   GE  K + H+   +R Y +    +V  +
Sbjct: 338 YLIHGTLLRTLLIWMLYGVSMP---EDTVNEKGEMVKGVLHMCGRLRWYSMLLIWFVILY 394

Query: 372 YCLDGWTSSQPTWC*VVT 319
              + WT     WC  VT
Sbjct: 395 ALANAWTKWVDPWCGRVT 412


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 646,273,445
Number of Sequences: 1657284
Number of extensions: 11810649
Number of successful extensions: 23216
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 22668
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23214
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55371905986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)