Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0208
         (698 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   1.8  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   1.8  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    23   2.4  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    22   4.2  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   9.7  
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    21   9.7  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    21   9.7  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    21   9.7  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    21   9.7  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    21   9.7  

>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
 Frame = -3

Query: 519  LYLQTLVADVIK---PIGFEDDITGESKKELFHIAHHIRCYKVAYAIYVFFF 373
            ++L TL  D +    P G + +IT +   +  HI+      +    ++VFFF
Sbjct: 1283 VFLLTLKKDYLHIKWPFGVKTNITYDESTQEVHISKEYLQLEPIGLVFVFFF 1334


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
 Frame = -3

Query: 519  LYLQTLVADVIK---PIGFEDDITGESKKELFHIAHHIRCYKVAYAIYVFFF 373
            ++L TL  D +    P G + +IT +   +  HI+      +    ++VFFF
Sbjct: 1283 VFLLTLKKDYLHIKWPFGVKTNITYDESTQEVHISKEYLQLEPIGLVFVFFF 1334


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +3

Query: 228 GRAAVVTILETLELISQGGWRI 293
           G A ++   E +EL  +GGW++
Sbjct: 292 GEAGMLGYNEIVELQKEGGWKV 313


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = -2

Query: 667 ATRAIKKI*TFSIVQFEKIVPGRVPQITWK 578
           A+RA KKI T+   ++ K+    +  I W+
Sbjct: 509 ASRAFKKIVTYKGGKYRKVTFQCLKSIAWR 538


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -1

Query: 326 WLLEPIDIYNVNAPPTLRYK 267
           WL  P  + N   P +LR+K
Sbjct: 7   WLTPPHSLGNTVTPVSLRFK 26


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -2

Query: 217 KRITASRQK*KGWWYLP 167
           ++I  +  + + WWYLP
Sbjct: 264 RQIALTVPRYQAWWYLP 280


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -2

Query: 217 KRITASRQK*KGWWYLP 167
           ++I  +  + + WWYLP
Sbjct: 264 RQIALTVPRYQAWWYLP 280


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -2

Query: 217 KRITASRQK*KGWWYLP 167
           ++I  +  + + WWYLP
Sbjct: 264 RQIALTVPRYQAWWYLP 280


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -2

Query: 217 KRITASRQK*KGWWYLP 167
           ++I  +  + + WWYLP
Sbjct: 264 RQIALTVPRYQAWWYLP 280


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -2

Query: 217 KRITASRQK*KGWWYLP 167
           ++I  +  + + WWYLP
Sbjct: 264 RQIALTVPRYQAWWYLP 280


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,592
Number of Sequences: 336
Number of extensions: 3220
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)