Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0208
         (698 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY146748-1|AAO12063.1|  279|Anopheles gambiae odorant-binding pr...    26   1.3  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    25   2.3  
EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.       24   4.0  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    23   9.2  

>AY146748-1|AAO12063.1|  279|Anopheles gambiae odorant-binding
           protein AgamOBP41 protein.
          Length = 279

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 12/42 (28%), Positives = 20/42 (47%)
 Frame = -1

Query: 326 WLLEPIDIYNVNAPPTLRYKF*GLKYSYNGCPTLQTETHYCF 201
           ++ +P D YNVN   T   +   L+ +   C  L  E+  C+
Sbjct: 98  FVTDPADAYNVNRTETCLQELPALELNAEKCCGLAFESFLCY 139


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = -1

Query: 533 RRDSRCIYRLW*LTLSNQSALKTI*QANQKKNCFISHI 420
           R+  RC  R W  T  N+ + +   +AN  +   +SHI
Sbjct: 298 RQHDRCDSRRWKTTQFNRQSFRVALRANNFQERAVSHI 335


>EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.
          Length = 661

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 14/50 (28%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
 Frame = -1

Query: 356 GRAHSPLGVKWLLEPIDIYNVNAPPTLRYKF*GLKYSYNGCP-TLQTETH 210
           G  H P   +    P+++Y V      R++F  +  + + CP  LQ E H
Sbjct: 257 GTYHDPKKNETTQTPLEVYTVRRGARFRFRF--INAASHVCPLQLQIEDH 304


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -3

Query: 489 IKPIGFEDDITGESKK 442
           +K   FE+++ GESKK
Sbjct: 355 VKRAAFENEVAGESKK 370


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 689,365
Number of Sequences: 2352
Number of extensions: 12173
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)