Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0206
         (513 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK094887-1|BAC04450.1|  272|Homo sapiens protein ( Homo sapiens ...    48   3e-05
AK127459-1|BAC86988.1|  238|Homo sapiens protein ( Homo sapiens ...    46   8e-05
AK127847-1|BAC87159.1|  129|Homo sapiens protein ( Homo sapiens ...    42   0.002
AK127765-1|BAC87120.1|  184|Homo sapiens protein ( Homo sapiens ...    38   0.016
AK126793-1|BAC86696.1|  188|Homo sapiens protein ( Homo sapiens ...    35   0.19 

>AK094887-1|BAC04450.1|  272|Homo sapiens protein ( Homo sapiens
           cDNA FLJ37568 fis, clone BRCOC2002323. ).
          Length = 272

 Score = 47.6 bits (108), Expect = 3e-05
 Identities = 26/89 (29%), Positives = 43/89 (48%)
 Frame = +3

Query: 42  IFCDLSKAFDCVEHETLVRKLHHYGIRDGALELITSYLSGRIQTVDVKGNRSSGTTLKMG 221
           I  D  KAF+ ++H  +++ L+  GI    +++I +     I  + + G +  G  L  G
Sbjct: 3   ISIDAEKAFNKIKHPFMLKTLNKLGIDGTHIKIIRAIYDKPIANIILNGQKLEGFLLTTG 62

Query: 222 VPQGSILGPFLFLIYINDLPSFIESRHEV 308
             QG  L P LF I +  LP+ I    E+
Sbjct: 63  TRQGCPLSPLLFNIVLEVLPTAIRQEKEI 91


>AK127459-1|BAC86988.1|  238|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45551 fis, clone BRTHA2037247. ).
          Length = 238

 Score = 46.0 bits (104), Expect = 8e-05
 Identities = 26/89 (29%), Positives = 41/89 (46%)
 Frame = +3

Query: 42  IFCDLSKAFDCVEHETLVRKLHHYGIRDGALELITSYLSGRIQTVDVKGNRSSGTTLKMG 221
           I  D  KAF+ ++H  +++ L+  GI    L++I +    R   + + G +     LK G
Sbjct: 28  ISIDAEKAFNKIQHRFMLKTLNKLGIEGPCLKIIRAICDKRTANIILNGQQLEAFPLKTG 87

Query: 222 VPQGSILGPFLFLIYINDLPSFIESRHEV 308
             QG  L P LF I +  L   I    E+
Sbjct: 88  TRQGCPLSPLLFNIVLEVLARAIRQVKEI 116


>AK127847-1|BAC87159.1|  129|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45950 fis, clone PLACE7008136. ).
          Length = 129

 Score = 41.5 bits (93), Expect = 0.002
 Identities = 24/86 (27%), Positives = 37/86 (43%)
 Frame = +3

Query: 42  IFCDLSKAFDCVEHETLVRKLHHYGIRDGALELITSYLSGRIQTVDVKGNRSSGTTLKMG 221
           I  D  K FD ++H  +++ L   GI    L++I +        + + G       L+ G
Sbjct: 37  ISIDARKGFDKIQHPFMMKTLSKIGIEGTYLKVIKAIYHKSTANIILNGEMLKAFPLRTG 96

Query: 222 VPQGSILGPFLFLIYINDLPSFIESR 299
             QG +L P LF I +  L   I  R
Sbjct: 97  TRQGCLLSPLLFSIVLEVLARAIRER 122


>AK127765-1|BAC87120.1|  184|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45866 fis, clone OCBBF3001616. ).
          Length = 184

 Score = 38.3 bits (85), Expect = 0.016
 Identities = 22/89 (24%), Positives = 39/89 (43%)
 Frame = +3

Query: 42  IFCDLSKAFDCVEHETLVRKLHHYGIRDGALELITSYLSGRIQTVDVKGNRSSGTTLKMG 221
           I  D  KAF+ ++H  +++ +    I+   L +I +        + + G +     L++G
Sbjct: 43  ISIDAEKAFEEIQHRFMIKTVSKISIQGTYLNVIKAIYDKPTANMILNGEKLKAFPLRIG 102

Query: 222 VPQGSILGPFLFLIYINDLPSFIESRHEV 308
             QG  L P LF I +  L   I    E+
Sbjct: 103 TRQGCPLSPLLFNIALEVLTRAIRQEKEI 131


>AK126793-1|BAC86696.1|  188|Homo sapiens protein ( Homo sapiens
           cDNA FLJ44843 fis, clone BRACE3050270. ).
          Length = 188

 Score = 34.7 bits (76), Expect = 0.19
 Identities = 23/89 (25%), Positives = 38/89 (42%)
 Frame = +3

Query: 42  IFCDLSKAFDCVEHETLVRKLHHYGIRDGALELITSYLSGRIQTVDVKGNRSSGTTLKMG 221
           I  D  KAFD ++H  +++ L   GI    L+++ +        + + G++     LK G
Sbjct: 8   ISIDAEKAFDEIQHHFMLKILDKLGIDGTYLKIVRAIYDKPTANIILNGHKLEVFPLKTG 67

Query: 222 VPQGSILGPFLFLIYINDLPSFIESRHEV 308
             Q   L P LF   +  L   I    E+
Sbjct: 68  TRQECPLLPLLFNTVLEVLARAITQEKEI 96


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,054,994
Number of Sequences: 237096
Number of extensions: 1487335
Number of successful extensions: 3015
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2955
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3015
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4820001670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)