Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0206
(513 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 82 5e-16
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 76 3e-14
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 75 8e-14
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 73 2e-13
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 73 2e-13
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 73 2e-13
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 73 2e-13
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 73 2e-13
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 72 5e-13
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 72 5e-13
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 70 2e-12
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 70 2e-12
AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p pro... 68 7e-12
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 66 3e-11
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 63 2e-10
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 63 2e-10
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 62 6e-10
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 62 6e-10
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 62 6e-10
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 62 6e-10
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 62 6e-10
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 58 7e-09
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 58 9e-09
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 57 2e-08
X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein ( Dros... 52 6e-07
AY071740-1|AAL49362.1| 184|Drosophila melanogaster RH47344p pro... 51 8e-07
X51967-1|CAA36225.1| 1057|Drosophila melanogaster protein ( Dros... 45 5e-05
AE014296-2069|AAS65018.1| 1799|Drosophila melanogaster CG33265-P... 35 0.074
AY121628-1|AAM51955.1| 295|Drosophila melanogaster GH24653p pro... 29 3.7
AL121806-15|CAB65887.1| 613|Drosophila melanogaster EG:33C11.1 ... 29 3.7
AE014298-170|AAF45599.1| 613|Drosophila melanogaster CG11405-PA... 29 3.7
AE014297-1024|AAF54439.1| 1080|Drosophila melanogaster CG16908-P... 28 6.5
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding protein,
3' end. ).
Length = 858
Score = 81.8 bits (193), Expect = 5e-16
Identities = 50/145 (34%), Positives = 80/145 (55%)
Frame = +3
Query: 33 CLGIFCDLSKAFDCVEHETLVRKLHHYGIRDGALELITSYLSGRIQTVDVKGNRSSGTTL 212
C +F D+S+AFD V + L+ K+ + + +L+ SYL R V S+ T+
Sbjct: 576 CTAVFLDVSQAFDKVWLDGLMFKIK-ISLPESTHKLLKSYLYDRKFAVRCNTATSTVHTI 634
Query: 213 KMGVPQGSILGPFLFLIYINDLPSFIESRHEVVLFADDTSLLFKIKRQLQVYDEVNDAIS 392
+ GVPQGS+LGP L+LIY D+P+ SR V FADDT++L + + +Q ++ +
Sbjct: 635 EAGVPQGSVLGPTLYLIYTADIPT--NSRLTVSTFADDTAILSRSRSPIQATAQLALYLI 692
Query: 393 CVVHWFRINNLLLNSKKTKCIKFTL 467
+ W + +N +K K + FTL
Sbjct: 693 DIKKWLSDWRIKVNEQKCKHVTFTL 717
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 75.8 bits (178), Expect = 3e-14
Identities = 46/151 (30%), Positives = 78/151 (51%)
Frame = +3
Query: 15 WEESHDCLGIFCDLSKAFDCVEHETLVRKLHHYGIRDGALELITSYLSGRIQTVDVKGNR 194
+E C IF D+++AFD V + L+ K+ + +L+ SYL R+ + +
Sbjct: 568 FEHREYCTAIFLDVAQAFDRVWLDGLLFKIIKL-LPQNTHKLLKSYLYNRVFAIRCDTST 626
Query: 195 SSGTTLKMGVPQGSILGPFLFLIYINDLPSFIESRHEVVLFADDTSLLFKIKRQLQVYDE 374
S ++ GVPQGS+LGP L+ +Y D P I+ FADDT++L + K ++
Sbjct: 627 SRDCAIEAGVPQGSVLGPILYTLYTADFP--IDYNLTTSTFADDTAILSRSKCPIKATAL 684
Query: 375 VNDAISCVVHWFRINNLLLNSKKTKCIKFTL 467
++ ++ V W + +N +K K + FTL
Sbjct: 685 LSRHLTSVERWLADWRISINVQKCKQVTFTL 715
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown protein.
Length = 908
Score = 74.5 bits (175), Expect = 8e-14
Identities = 47/155 (30%), Positives = 75/155 (48%), Gaps = 3/155 (1%)
Frame = +3
Query: 15 WEESHDCLGIFCDLSKAFDCVEHETLVRKLHHYGIRDGALELITSYLSGRIQTVDVKGNR 194
++ C +F D+ +AFD V H L K+ + L+ SYL GR V
Sbjct: 572 YDSKEYCNSLFLDIREAFDRVWHIGLQLKIKQT-LPAPYFGLLKSYLEGRRFAVRFHSAI 630
Query: 195 SSGTTLKMGVPQGSILGPFLFLIYINDLPS---FIESRHEVVLFADDTSLLFKIKRQLQV 365
S+ + GVPQGS+LGP L+ +Y +D+P + + + FADD + ++ + +
Sbjct: 631 STEHNVAAGVPQGSVLGPLLYCLYSHDMPQPDVSLYGKSMLATFADDVCVTYRSRCEHDA 690
Query: 366 YDEVNDAISCVVHWFRINNLLLNSKKTKCIKFTLK 470
D + D W R N+ +NS K+ + FTLK
Sbjct: 691 ADGIQDFAYRFSEWARRWNIGINSSKSNNVCFTLK 725
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p protein.
Length = 888
Score = 73.3 bits (172), Expect = 2e-13
Identities = 45/151 (29%), Positives = 77/151 (50%)
Frame = +3
Query: 15 WEESHDCLGIFCDLSKAFDCVEHETLVRKLHHYGIRDGALELITSYLSGRIQTVDVKGNR 194
+E C IF D+++AFD V + L+ K+ + +L+ SYL + + +
Sbjct: 568 FEHREYCTAIFLDVAQAFDRVWLDGLLFKIIKL-LPQNTHKLLKSYLYNTVFAIRCDTST 626
Query: 195 SSGTTLKMGVPQGSILGPFLFLIYINDLPSFIESRHEVVLFADDTSLLFKIKRQLQVYDE 374
S ++ GVPQGS+LGP L+ +Y D P I+ FADDT++L + K ++
Sbjct: 627 SRDCAIEAGVPQGSVLGPILYTLYTADFP--IDYNLTTSTFADDTAILSRSKCPIKATAL 684
Query: 375 VNDAISCVVHWFRINNLLLNSKKTKCIKFTL 467
++ ++ V W + +N +K K + FTL
Sbjct: 685 LSRHLTSVERWLADWRISINVQKCKQVTFTL 715
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 73.3 bits (172), Expect = 2e-13
Identities = 53/167 (31%), Positives = 87/167 (52%), Gaps = 15/167 (8%)
Frame = +3
Query: 15 WEESHDCLGIFCDLSKAFDCVEHETLVRKLHHYGIRDGALELITSYLSGRIQTVDVKGNR 194
++E C F D+++AFD V H+ L+ KL I +L+ +YLS R +V + G
Sbjct: 173 FDEKDVCSATFLDITEAFDRVWHDGLLYKLSRL-IPRYLFDLLENYLSNRTFSVRIDGET 231
Query: 195 SSGT-TLKMGVPQGSILGPFLFLIYINDLP-----------SFIESRHEVVL---FADDT 329
+S ++ GVPQGSILGP L+ IY +D+P SF + ++ +ADDT
Sbjct: 232 TSRIGNIRAGVPQGSILGPVLYSIYSSDMPYPIVKDYMRNISFPDYHPTNIILATYADDT 291
Query: 330 SLLFKIKRQLQVYDEVNDAISCVVHWFRINNLLLNSKKTKCIKFTLK 470
+L + K + + ++ W + ++ +N+KKT I F+LK
Sbjct: 292 IILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHILFSLK 338
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 73.3 bits (172), Expect = 2e-13
Identities = 53/167 (31%), Positives = 87/167 (52%), Gaps = 15/167 (8%)
Frame = +3
Query: 15 WEESHDCLGIFCDLSKAFDCVEHETLVRKLHHYGIRDGALELITSYLSGRIQTVDVKGNR 194
++E C F D+++AFD V H+ L+ KL I +L+ +YLS R +V + G
Sbjct: 620 FDEKDVCSATFLDITEAFDRVWHDGLLYKLSRL-IPRYLFDLLENYLSNRTFSVRIDGET 678
Query: 195 SSGT-TLKMGVPQGSILGPFLFLIYINDLP-----------SFIESRHEVVL---FADDT 329
+S ++ GVPQGSILGP L+ IY +D+P SF + ++ +ADDT
Sbjct: 679 TSRIGNIRAGVPQGSILGPVLYSIYSSDMPYPIVKDYMRNISFPDYHPTNIILATYADDT 738
Query: 330 SLLFKIKRQLQVYDEVNDAISCVVHWFRINNLLLNSKKTKCIKFTLK 470
+L + K + + ++ W + ++ +N+KKT I F+LK
Sbjct: 739 IILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHILFSLK 785
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 73.3 bits (172), Expect = 2e-13
Identities = 53/167 (31%), Positives = 87/167 (52%), Gaps = 15/167 (8%)
Frame = +3
Query: 15 WEESHDCLGIFCDLSKAFDCVEHETLVRKLHHYGIRDGALELITSYLSGRIQTVDVKGNR 194
++E C F D+++AFD V H+ L+ KL I +L+ +YLS R +V + G
Sbjct: 620 FDEKDVCSATFLDITEAFDRVWHDGLLYKLSRL-IPRYLFDLLENYLSNRTFSVRIDGET 678
Query: 195 SSGT-TLKMGVPQGSILGPFLFLIYINDLP-----------SFIESRHEVVL---FADDT 329
+S ++ GVPQGSILGP L+ IY +D+P SF + ++ +ADDT
Sbjct: 679 TSRIGNIRAGVPQGSILGPVLYSIYSSDMPYPIVKDYMRNISFPDYHPTNIILATYADDT 738
Query: 330 SLLFKIKRQLQVYDEVNDAISCVVHWFRINNLLLNSKKTKCIKFTLK 470
+L + K + + ++ W + ++ +N+KKT I F+LK
Sbjct: 739 IILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHILFSLK 785
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 73.3 bits (172), Expect = 2e-13
Identities = 53/167 (31%), Positives = 87/167 (52%), Gaps = 15/167 (8%)
Frame = +3
Query: 15 WEESHDCLGIFCDLSKAFDCVEHETLVRKLHHYGIRDGALELITSYLSGRIQTVDVKGNR 194
++E C F D+++AFD V H+ L+ KL I +L+ +YLS R +V + G
Sbjct: 620 FDEKDVCSATFLDITEAFDRVWHDGLLYKLSRL-IPRYLFDLLENYLSNRTFSVRIDGET 678
Query: 195 SSGT-TLKMGVPQGSILGPFLFLIYINDLP-----------SFIESRHEVVL---FADDT 329
+S ++ GVPQGSILGP L+ IY +D+P SF + ++ +ADDT
Sbjct: 679 TSRIGNIRAGVPQGSILGPVLYSIYSSDMPYPIVKDYMRNISFPDYHPTNIILATYADDT 738
Query: 330 SLLFKIKRQLQVYDEVNDAISCVVHWFRINNLLLNSKKTKCIKFTLK 470
+L + K + + ++ W + ++ +N+KKT I F+LK
Sbjct: 739 IILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHILFSLK 785
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 71.7 bits (168), Expect = 5e-13
Identities = 55/171 (32%), Positives = 83/171 (48%), Gaps = 9/171 (5%)
Frame = +3
Query: 18 EESHDCLGIFCDLSKAFDCVEHETLVRKLHHYGIRDGALELITSYLSGRIQTVDVKGNRS 197
E +G F D+ +AFD V H L+ K L ++ S+L R V V G +S
Sbjct: 575 ENKEYAVGAFLDIQQAFDRVWHPGLLYKAKRLFPPQLYL-VVKSFLEERTFHVSVDGYKS 633
Query: 198 SGTTLKMGVPQGSILGPFLFLIYINDLPS---FIESRHEVVL---FADDTSLLFKIKRQL 359
S + GVPQGS+LGP L+ ++ +D+P+ E E VL +ADDT++L K K L
Sbjct: 634 SIKPIAAGVPQGSVLGPTLYSVFASDMPTHTPVTEVDEEDVLIATYADDTAVLTKSKSIL 693
Query: 360 QVYDEVNDAISCVVHWFRINNLLLNSKKTKCIKF---TLKCIKSSLNVRQV 503
+ + + W N+ +N++K + F T C SLN R +
Sbjct: 694 AATSGLQEYLDAFQQWAENWNVRINAEKCANVTFANRTGSCPGVSLNGRLI 744
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 71.7 bits (168), Expect = 5e-13
Identities = 55/171 (32%), Positives = 83/171 (48%), Gaps = 9/171 (5%)
Frame = +3
Query: 18 EESHDCLGIFCDLSKAFDCVEHETLVRKLHHYGIRDGALELITSYLSGRIQTVDVKGNRS 197
E +G F D+ +AFD V H L+ K L ++ S+L R V V G +S
Sbjct: 377 ENKEYAVGAFLDIQQAFDRVWHPGLLYKAKRLFPPQLYL-VVKSFLEERTFHVSVDGYKS 435
Query: 198 SGTTLKMGVPQGSILGPFLFLIYINDLPS---FIESRHEVVL---FADDTSLLFKIKRQL 359
S + GVPQGS+LGP L+ ++ +D+P+ E E VL +ADDT++L K K L
Sbjct: 436 SIKPIAAGVPQGSVLGPTLYSVFASDMPTHTPVTEVDEEDVLIATYADDTAVLTKSKSIL 495
Query: 360 QVYDEVNDAISCVVHWFRINNLLLNSKKTKCIKF---TLKCIKSSLNVRQV 503
+ + + W N+ +N++K + F T C SLN R +
Sbjct: 496 AATSGLQEYLDAFQQWAENWNVRINAEKCANVTFANRTGSCPGVSLNGRLI 546
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 69.7 bits (163), Expect = 2e-12
Identities = 40/138 (28%), Positives = 75/138 (54%)
Frame = +3
Query: 51 DLSKAFDCVEHETLVRKLHHYGIRDGALELITSYLSGRIQTVDVKGNRSSGTTLKMGVPQ 230
D+ AFD V H+ L+ KL G ++++ ++L+ R +V++ ++S+ L GVPQ
Sbjct: 609 DIEAAFDTVWHDGLLHKLKMIGTPIYLIKIVQNFLTHRYFSVNLNSSQSARRILNAGVPQ 668
Query: 231 GSILGPFLFLIYINDLPSFIESRHEVVLFADDTSLLFKIKRQLQVYDEVNDAISCVVHWF 410
GS+LGP LF I+ +D+P + + LFADD ++ ++ + ++ + ++
Sbjct: 669 GSVLGPTLFNIFTHDIPQ--ATNCVLSLFADDAAVYSAGFSYSEINQSMQSYLNELDIYY 726
Query: 411 RINNLLLNSKKTKCIKFT 464
+ + +N KT I FT
Sbjct: 727 KKWKIKINPNKTNAIFFT 744
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 69.7 bits (163), Expect = 2e-12
Identities = 40/138 (28%), Positives = 75/138 (54%)
Frame = +3
Query: 51 DLSKAFDCVEHETLVRKLHHYGIRDGALELITSYLSGRIQTVDVKGNRSSGTTLKMGVPQ 230
D+ AFD V H+ L+ KL G ++++ ++L+ R +V++ ++S+ L GVPQ
Sbjct: 557 DIEAAFDTVWHDGLLHKLKMIGTPIYLIKIVQNFLTHRYFSVNLNSSQSARRILNAGVPQ 616
Query: 231 GSILGPFLFLIYINDLPSFIESRHEVVLFADDTSLLFKIKRQLQVYDEVNDAISCVVHWF 410
GS+LGP LF I+ +D+P + + LFADD ++ ++ + ++ + ++
Sbjct: 617 GSVLGPTLFNIFTHDIPQ--ATNCVLSLFADDAAVYSAGFSYSEINQSMQSYLNELDIYY 674
Query: 411 RINNLLLNSKKTKCIKFT 464
+ + +N KT I FT
Sbjct: 675 KKWKIKINPNKTNAIFFT 692
>AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p
protein.
Length = 241
Score = 68.1 bits (159), Expect = 7e-12
Identities = 37/108 (34%), Positives = 62/108 (57%)
Frame = +3
Query: 15 WEESHDCLGIFCDLSKAFDCVEHETLVRKLHHYGIRDGALELITSYLSGRIQTVDVKGNR 194
+E C +F D+++AFD V + L+ K+ + +L+ SYL R+ V +
Sbjct: 109 FEHREYCTALFLDVAQAFDRVWLDGLMFKIIQL-LPQNIHKLLKSYLDKRVFAVRCSSST 167
Query: 195 SSGTTLKMGVPQGSILGPFLFLIYINDLPSFIESRHEVVLFADDTSLL 338
SS T++ GVPQGS+LGP L+ +Y D+P+ + + FADDT+++
Sbjct: 168 SSDFTIEAGVPQGSVLGPILYTLYTADIPT--NYQLTIFTFADDTAII 213
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p protein.
Length = 906
Score = 65.7 bits (153), Expect = 3e-11
Identities = 45/160 (28%), Positives = 80/160 (50%), Gaps = 6/160 (3%)
Frame = +3
Query: 15 WEESHDCLGIFCDLSKAFDCVEHETLVRKLHHYGIRDGALELITSYLSGRIQTVDVKGNR 194
+++ C +F D+ +AFD V H+ L+ K+ ++ SYL R V V+ +
Sbjct: 573 FDDKEYCNAVFIDMQQAFDRVWHDGLISKVKKL-FPAPYYGVLKSYLEDRRFMVRVRNSY 631
Query: 195 SSGTTLKMGVPQGSILGPFLFLIYINDLP-----SFIESRHEVV-LFADDTSLLFKIKRQ 356
S ++ GVPQGS+LGP L+ ++ DLP + R ++ +ADD +LL+
Sbjct: 632 SIPRVMRAGVPQGSVLGPLLYSVFTADLPCPNAYHMADPRKALLATYADDIALLYSSNCC 691
Query: 357 LQVYDEVNDAISCVVHWFRINNLLLNSKKTKCIKFTLKCI 476
+ + + ++ + W + L +N +KT FTLK +
Sbjct: 692 NEAARGLQEYLTTLAAWCKRWILKVNPQKTINPCFTLKTL 731
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 62.9 bits (146), Expect = 2e-10
Identities = 49/159 (30%), Positives = 75/159 (47%), Gaps = 7/159 (4%)
Frame = +3
Query: 15 WEESHDCLGIFCDLSKAFDCVEHETLVRKLHHYGIRDGALELITSYLSGR-IQTVDVKGN 191
+E C +F D+S+AFD V HE L+ KL + ++ SYL+ R + D G
Sbjct: 617 FERKEYCSAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQAGE 675
Query: 192 RSSGTTLKMGVPQGSILGPFLFLIYINDLP---SFIESRHEVVL---FADDTSLLFKIKR 353
S + GVPQGS LGP L+ I+ +D+P + S E ++ +ADDT +L
Sbjct: 676 TSRTGQIGAGVPQGSNLGPLLYSIFSSDMPLPYIYRPSPTERIMLSTYADDTIVLSSDTL 735
Query: 354 QLQVYDEVNDAISCVVHWFRINNLLLNSKKTKCIKFTLK 470
+ + W + +N+ KT + FTLK
Sbjct: 736 ATAATRNNENYLKSFSDWADKWGISVNAAKTGHVIFTLK 774
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 62.9 bits (146), Expect = 2e-10
Identities = 52/170 (30%), Positives = 80/170 (47%), Gaps = 9/170 (5%)
Frame = +3
Query: 15 WEESHDCLGIFCDLSKAFDCVEHETLVRKLHHYGIRDGALELITSYLSGR-IQTVDVKGN 191
+E C +F D+S+AFD V HE L+ KL + ++ SYL+ R + D G
Sbjct: 629 FERKEYCSAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQAGE 687
Query: 192 RSSGTTLKMGVPQGSILGPFLFLIYINDLP-SFI-----ESRHEVVLFADDTSLLFKIKR 353
S + GVPQGS LGP L+ I+ +D+P +I R + +ADDT +L
Sbjct: 688 TSRTGQIGAGVPQGSNLGPLLYSIFSSDMPLPYIYRPSPTQRIMLSTYADDTIVLSSDTL 747
Query: 354 QLQVYDEVNDAISCVVHWFRINNLLLNSKKTKCIKFTLK--CIKSSLNVR 497
+ + W + +N+ KT + FTLK +S+NV+
Sbjct: 748 ATAATRNNENYLKTFSDWADKWGISVNAAKTGHVIFTLKNDLPTNSMNVK 797
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
cds. ).
Length = 964
Score = 61.7 bits (143), Expect = 6e-10
Identities = 48/159 (30%), Positives = 75/159 (47%), Gaps = 7/159 (4%)
Frame = +3
Query: 15 WEESHDCLGIFCDLSKAFDCVEHETLVRKLHHYGIRDGALELITSYLSGR-IQTVDVKGN 191
+E C +F D+S+AFD V HE L+ KL + ++ SYL+ R + D G
Sbjct: 501 FERKEYCSAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQAGE 559
Query: 192 RSSGTTLKMGVPQGSILGPFLFLIYINDLP---SFIESRHEVVL---FADDTSLLFKIKR 353
S + GVPQGS LGP L+ I+ +D+P + S E ++ +ADDT +L
Sbjct: 560 TSRAGQIGAGVPQGSNLGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDIL 619
Query: 354 QLQVYDEVNDAISCVVHWFRINNLLLNSKKTKCIKFTLK 470
+ + W + +N+ KT + +TLK
Sbjct: 620 ATAATRNNENYLKTFSDWADKWGISVNAAKTGHVIYTLK 658
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 61.7 bits (143), Expect = 6e-10
Identities = 48/159 (30%), Positives = 75/159 (47%), Gaps = 7/159 (4%)
Frame = +3
Query: 15 WEESHDCLGIFCDLSKAFDCVEHETLVRKLHHYGIRDGALELITSYLSGR-IQTVDVKGN 191
+E C +F D+S+AFD V HE L+ KL + ++ SYL+ R + D G
Sbjct: 617 FERKEYCSAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQAGE 675
Query: 192 RSSGTTLKMGVPQGSILGPFLFLIYINDLP---SFIESRHEVVL---FADDTSLLFKIKR 353
S + GVPQGS LGP L+ I+ +D+P + S E ++ +ADDT +L
Sbjct: 676 TSRAGQIGAGVPQGSNLGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDIL 735
Query: 354 QLQVYDEVNDAISCVVHWFRINNLLLNSKKTKCIKFTLK 470
+ + W + +N+ KT + +TLK
Sbjct: 736 ATAATRNNENYLKTFSDWADKWGISVNAAKTGHVIYTLK 774
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 61.7 bits (143), Expect = 6e-10
Identities = 48/159 (30%), Positives = 75/159 (47%), Gaps = 7/159 (4%)
Frame = +3
Query: 15 WEESHDCLGIFCDLSKAFDCVEHETLVRKLHHYGIRDGALELITSYLSGR-IQTVDVKGN 191
+E C +F D+S+AFD V HE L+ KL + ++ SYL+ R + D G
Sbjct: 617 FERKEYCSAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQAGE 675
Query: 192 RSSGTTLKMGVPQGSILGPFLFLIYINDLP---SFIESRHEVVL---FADDTSLLFKIKR 353
S + GVPQGS LGP L+ I+ +D+P + S E ++ +ADDT +L
Sbjct: 676 TSRAGQIGAGVPQGSNLGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDIL 735
Query: 354 QLQVYDEVNDAISCVVHWFRINNLLLNSKKTKCIKFTLK 470
+ + W + +N+ KT + +TLK
Sbjct: 736 ATAATRNNENYLKTFSDWADKWGISVNAAKTGHVIYTLK 774
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 61.7 bits (143), Expect = 6e-10
Identities = 48/159 (30%), Positives = 75/159 (47%), Gaps = 7/159 (4%)
Frame = +3
Query: 15 WEESHDCLGIFCDLSKAFDCVEHETLVRKLHHYGIRDGALELITSYLSGR-IQTVDVKGN 191
+E C +F D+S+AFD V HE L+ KL + ++ SYL+ R + D G
Sbjct: 579 FERKEYCSAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQAGE 637
Query: 192 RSSGTTLKMGVPQGSILGPFLFLIYINDLP---SFIESRHEVVL---FADDTSLLFKIKR 353
S + GVPQGS LGP L+ I+ +D+P + S E ++ +ADDT +L
Sbjct: 638 TSRAGQIGAGVPQGSNLGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDIL 697
Query: 354 QLQVYDEVNDAISCVVHWFRINNLLLNSKKTKCIKFTLK 470
+ + W + +N+ KT + +TLK
Sbjct: 698 ATAATRNNENYLKTFSDWADKWGISVNAAKTGHVIYTLK 736
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 61.7 bits (143), Expect = 6e-10
Identities = 48/159 (30%), Positives = 75/159 (47%), Gaps = 7/159 (4%)
Frame = +3
Query: 15 WEESHDCLGIFCDLSKAFDCVEHETLVRKLHHYGIRDGALELITSYLSGR-IQTVDVKGN 191
+E C +F D+S+AFD V HE L+ KL + ++ SYL+ R + D G
Sbjct: 617 FERKEYCSAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQAGE 675
Query: 192 RSSGTTLKMGVPQGSILGPFLFLIYINDLP---SFIESRHEVVL---FADDTSLLFKIKR 353
S + GVPQGS LGP L+ I+ +D+P + S E ++ +ADDT +L
Sbjct: 676 TSRAGQIGAGVPQGSNLGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDIL 735
Query: 354 QLQVYDEVNDAISCVVHWFRINNLLLNSKKTKCIKFTLK 470
+ + W + +N+ KT + +TLK
Sbjct: 736 ATAATRNNENYLKTFSDWADKWGISVNAAKTGHVIYTLK 774
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 58.0 bits (134), Expect = 7e-09
Identities = 42/157 (26%), Positives = 73/157 (46%), Gaps = 3/157 (1%)
Frame = +3
Query: 51 DLSKAFDCVEHETLVRKLHHYGIRDGALELITSYLSGRIQTVDVKGNRSSGTTLKMGVPQ 230
D +AFD V ++ +L +GI LI ++++ R V + S+ L G+PQ
Sbjct: 584 DFERAFDRVGIHAVLCRLERWGIGPRLYNLIKAFMTNRSFRVRINNVTSNSHILHNGIPQ 643
Query: 231 GSILGPFLFLIYINDLPSFIESRHE---VVLFADDTSLLFKIKRQLQVYDEVNDAISCVV 401
GS L LF+I I D+ + +RH+ + L+ADD + KIK V ++ + + +
Sbjct: 644 GSPLSVVLFMIAIEDINDIV-TRHKDIYISLYADDAIIFTKIKNINTVREKFLEILQEIN 702
Query: 402 HWFRINNLLLNSKKTKCIKFTLKCIKSSLNVRQVDSN 512
W + L +K + + C K N+ + N
Sbjct: 703 SWGATSGASLAIEKCQTLHI---CRKQRCNLSDIVFN 736
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 57.6 bits (133), Expect = 9e-09
Identities = 44/159 (27%), Positives = 73/159 (45%), Gaps = 6/159 (3%)
Frame = +3
Query: 51 DLSKAFDCVEHETLVRKLHHYGIRDGALELITSYLSGRIQTVDVKGNRSSGTTLKMGVPQ 230
D S+AFD V +++++L + ++ I +++S R TV V + SS L G+PQ
Sbjct: 576 DFSRAFDRVGVHSIIQQLQEWKTGPKIIKYIKNFMSNRKITVRVGPHTSSPLPLFNGIPQ 635
Query: 231 GSILGPFLFLIYINDLPSFIESRHEVVL--FADDTSLLFKIKRQLQVYDEVNDAISCVVH 404
GS + LFLI N L + I E+ +ADD L+ + +++ + +
Sbjct: 636 GSPISVILFLIAFNKLSNIISLHKEIKFNAYADDFFLIINFNKNTNTNFNLDNLFDDIEN 695
Query: 405 WFRINNLLLNSKKTK----CIKFTLKCIKSSLNVRQVDS 509
W + L+ K + C K C K S N Q+ S
Sbjct: 696 WCSYSGASLSLSKCQHLHICRKRHCTC-KISCNNFQIPS 733
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 56.8 bits (131), Expect = 2e-08
Identities = 41/143 (28%), Positives = 68/143 (47%), Gaps = 2/143 (1%)
Frame = +3
Query: 33 CLGIFCDLSKAFDCVEHETLVRKLHHYGIRDGALELITSYLSGRIQT-VDVKGNRSSGTT 209
C I D+ AF+ ++ + + G+ D +I +Y R+ V G RS
Sbjct: 551 CAIITLDVKNAFNTARWPIILGAMRNLGVPDYIRGVIGNYFRDRVLWYVTEDGPRSH--Q 608
Query: 210 LKMGVPQGSILGPFLFLIYINDLPSFIESRH-EVVLFADDTSLLFKIKRQLQVYDEVNDA 386
+ GVPQGS+LGP L+ I + + S + R E+ FADD ++ K ++ D N A
Sbjct: 609 VSAGVPQGSVLGPILWNIMYDGILSISKPRGVELHCFADDVAITAVAKTIPELQDISNVA 668
Query: 387 ISCVVHWFRINNLLLNSKKTKCI 455
I+ + W L + + KT+ +
Sbjct: 669 ITAAIEWLEKVGLKIAAHKTEVV 691
>X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type I retrotransposable
element R1Dm. ).
Length = 1021
Score = 51.6 bits (118), Expect = 6e-07
Identities = 43/139 (30%), Positives = 67/139 (48%), Gaps = 4/139 (2%)
Frame = +3
Query: 36 LGIFCDLSKAFDCVEHETLVRKLHHYGIRDGALELITSYLSGRIQTVDVKGNRSSGTT-- 209
LG F D AFD VE + +L G R+ + L S+ SGR + SSGT
Sbjct: 573 LGTFVDFKGAFDNVEWSAALSRLADLGCRE--MGLWQSFFSGRRAVI----RSSSGTVEV 626
Query: 210 -LKMGVPQGSILGPFLFLIYINDLPSFIESRHEVVLFADDTSLLFKIKRQLQVYDEVNDA 386
+ G PQGSI GPF++ I ++ L ++ ++ +ADD LL + + + ++
Sbjct: 627 PVTRGCPQGSISGPFIWDILMDVLLQRLQPYCQLSAYADDLLLLVEGNSRAVLEEKGAQL 686
Query: 387 ISCVVHW-FRINNLLLNSK 440
+S V W + + L SK
Sbjct: 687 MSIVETWGAEVGDCLSTSK 705
>AY071740-1|AAL49362.1| 184|Drosophila melanogaster RH47344p
protein.
Length = 184
Score = 51.2 bits (117), Expect = 8e-07
Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = +3
Query: 219 GVPQGSILGPFLF-LIYINDLPSFIESRHEVVLFADDTSLLFKIKRQLQVYDEVNDAISC 395
GVPQGS+LGP L+ +Y L + R E+V FADD +LL K + + N I
Sbjct: 50 GVPQGSVLGPLLWNTMYDGILRLPLVGRSEIVGFADDVALLVVDKYPGKAEEMCNRNIRA 109
Query: 396 VVHWFRINNLLLNSKKTKCI 455
+ HW L L +KTK +
Sbjct: 110 IEHWLSSMGLELAPEKTKAV 129
>X51967-1|CAA36225.1| 1057|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type II retrotransposable
element R2Dm. ).
Length = 1057
Score = 45.2 bits (102), Expect = 5e-05
Identities = 38/126 (30%), Positives = 57/126 (45%), Gaps = 10/126 (7%)
Frame = +3
Query: 51 DLSKAFDCVEHETLVRKLHHYGIRDGALELITSYLSGRIQTVDVKGNRSSGTTLKMGVPQ 230
D+SKAFD + H ++ L YG G ++ + + G +++ G S GV Q
Sbjct: 482 DVSKAFDSLSHASIYDTLRAYGAPKGFVDYVQNTYEGGGTSLNGDGWSSEEFVPARGVKQ 541
Query: 231 GSILGPFLFLI----YINDLPSFIESR-----HEVVLFADDTSLLFKIKRQLQV-YDEVN 380
G L P LF + + LPS I ++ FADD L + + LQV D+
Sbjct: 542 GDPLSPILFNLVMDRLLRTLPSEIGAKVGNAITNAAAFADDLVLFAETRMGLQVLLDKTL 601
Query: 381 DAISCV 398
D +S V
Sbjct: 602 DFLSIV 607
>AE014296-2069|AAS65018.1| 1799|Drosophila melanogaster CG33265-PA
protein.
Length = 1799
Score = 34.7 bits (76), Expect = 0.074
Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Frame = +3
Query: 33 CLGIFCDLSKAFDC-VEHETLVRKL-HHYGIRDGALELITSYLSGRIQTVDVKGNRSSGT 206
C+ + L+K +H+ ++KL + Y IRDG + I S S ++ +++ N + +
Sbjct: 37 CVAVTVVLTKIVHVKTQHQQSLQKLSNQYVIRDGDTQYIKSRTSEKVSQLNLNKNNDTAS 96
Query: 207 TLKMGVP 227
LK+G P
Sbjct: 97 KLKIGAP 103
>AY121628-1|AAM51955.1| 295|Drosophila melanogaster GH24653p
protein.
Length = 295
Score = 29.1 bits (62), Expect = 3.7
Identities = 20/80 (25%), Positives = 34/80 (42%), Gaps = 5/80 (6%)
Frame = -3
Query: 340 NNKDVSS-ANNTTSCRDSIKLGKSFIYIRNKKGPKMEP*GTPI----FNVVPEDLFPFTS 176
NN ++SS ++N TS + +++N+ P T + F P D FP
Sbjct: 111 NNSNISSHSSNATSSTTPTATSSAIEFVKNELVDSQSPYTTALSAERFLFEPSDGFPDIK 170
Query: 175 TVCILPDK*EVISSNAPSLI 116
C+LP + N S++
Sbjct: 171 HACVLPSPCGINGLNMASVV 190
>AL121806-15|CAB65887.1| 613|Drosophila melanogaster EG:33C11.1
protein.
Length = 613
Score = 29.1 bits (62), Expect = 3.7
Identities = 20/80 (25%), Positives = 34/80 (42%), Gaps = 5/80 (6%)
Frame = -3
Query: 340 NNKDVSS-ANNTTSCRDSIKLGKSFIYIRNKKGPKMEP*GTPI----FNVVPEDLFPFTS 176
NN ++SS ++N TS + +++N+ P T + F P D FP
Sbjct: 429 NNSNISSHSSNATSSTTPTATSSAIEFVKNELVDSQSPYTTALSAERFLFEPSDGFPDIK 488
Query: 175 TVCILPDK*EVISSNAPSLI 116
C+LP + N S++
Sbjct: 489 HACVLPSPCGINGLNMASVV 508
>AE014298-170|AAF45599.1| 613|Drosophila melanogaster CG11405-PA
protein.
Length = 613
Score = 29.1 bits (62), Expect = 3.7
Identities = 20/80 (25%), Positives = 34/80 (42%), Gaps = 5/80 (6%)
Frame = -3
Query: 340 NNKDVSS-ANNTTSCRDSIKLGKSFIYIRNKKGPKMEP*GTPI----FNVVPEDLFPFTS 176
NN ++SS ++N TS + +++N+ P T + F P D FP
Sbjct: 429 NNSNISSHSSNATSSTTPTATSSAIEFVKNELVDSQSPYTTALSAERFLFEPSDGFPDIK 488
Query: 175 TVCILPDK*EVISSNAPSLI 116
C+LP + N S++
Sbjct: 489 HACVLPSPCGINGLNMASVV 508
>AE014297-1024|AAF54439.1| 1080|Drosophila melanogaster CG16908-PA
protein.
Length = 1080
Score = 28.3 bits (60), Expect = 6.5
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -1
Query: 273 RLYILEIKKDPKWNPEVHPFSTWCLKIYFLSH 178
+L++ +I +D WN + P S W LK+ +H
Sbjct: 567 KLFLDQILRDEHWNLALQPDSAWRLKVNKPTH 598
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,617,714
Number of Sequences: 53049
Number of extensions: 441493
Number of successful extensions: 1013
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 968
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 994
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1867000320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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