Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0205
         (682 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.57 
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    23   1.8  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    22   4.0  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.0 bits (52), Expect = 0.57
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = +1

Query: 196 LMYTIHLLFLINNVLNVCIY 255
           +++TIHLLF    ++ +CIY
Sbjct: 220 IIFTIHLLFYCVLIILLCIY 239



 Score = 24.2 bits (50), Expect = 1.0
 Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
 Frame = -3

Query: 164 LIFGCQTYKLNRLTLFTLCFNLPILH----*CVWFLIYS*LLWTSYTNFY 27
           L+F C     N   LF LC +   LH     C+++   + +++T +  FY
Sbjct: 180 LLFCCAFIFFNMHLLFLLCLDYFTLHLLFLPCIYYFYSAFIIFTIHLLFY 229



 Score = 21.0 bits (42), Expect = 9.3
 Identities = 6/11 (54%), Positives = 11/11 (100%)
 Frame = +1

Query: 196 LMYTIHLLFLI 228
           +++T+HLLFL+
Sbjct: 121 IIFTVHLLFLL 131



 Score = 21.0 bits (42), Expect = 9.3
 Identities = 6/11 (54%), Positives = 11/11 (100%)
 Frame = +1

Query: 196 LMYTIHLLFLI 228
           +++T+HLLFL+
Sbjct: 154 IIFTVHLLFLL 164


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = +1

Query: 157 KIKTLK*SKRQYRLMYTIHLLFLINNVLNV 246
           K+++   S+  Y  +   HLLFL+  VLN+
Sbjct: 104 KLESKDLSRTFYGFVIVAHLLFLVIFVLNI 133


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +1

Query: 85  QCKIGRLKQSVNKV 126
           Q KIG +K SVNK+
Sbjct: 292 QLKIGEIKYSVNKL 305


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,350
Number of Sequences: 336
Number of extensions: 3128
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17801955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)