Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0205
         (682 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY122146-1|AAM52658.1|  590|Drosophila melanogaster LD01951p pro...    29   5.9  
AE014135-39|AAF59363.2| 1459|Drosophila melanogaster CG31998-PA ...    29   5.9  

>AY122146-1|AAM52658.1|  590|Drosophila melanogaster LD01951p
           protein.
          Length = 590

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
 Frame = -3

Query: 557 SILSRSKNLYERYLR--FSLLVRFYHFIVFPSLMTQK 453
           SILSR  NL +RY+   F LL+  +H  +  SL+ ++
Sbjct: 91  SILSRKMNLRQRYVNFLFILLIAIHHISLSKSLLLEE 127


>AE014135-39|AAF59363.2| 1459|Drosophila melanogaster CG31998-PA
           protein.
          Length = 1459

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
 Frame = -3

Query: 557 SILSRSKNLYERYLR--FSLLVRFYHFIVFPSLMTQK 453
           SILSR  NL +RY+   F LL+  +H  +  SL+ ++
Sbjct: 91  SILSRKMNLRQRYVNFLFILLIAIHHISLSKSLLLEE 127


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,093,700
Number of Sequences: 53049
Number of extensions: 472863
Number of successful extensions: 760
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 737
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 760
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2971922400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)