Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0205
         (682 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83102-1|CAB05462.2|  356|Caenorhabditis elegans Hypothetical pr...    27   9.4  
Z81110-3|CAB03257.1|  323|Caenorhabditis elegans Hypothetical pr...    27   9.4  

>Z83102-1|CAB05462.2|  356|Caenorhabditis elegans Hypothetical
           protein C54C8.1 protein.
          Length = 356

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 17/40 (42%), Positives = 21/40 (52%)
 Frame = -2

Query: 525 KIFKIQPSSAFLSLYCVSLAHDTKETPRNTLNLRNAARLF 406
           KI K  PSS  L  Y   ++H  K+   NTLN+R    LF
Sbjct: 147 KILKTTPSS-LLKYYVEQVSHG-KQFYMNTLNIRTKEELF 184


>Z81110-3|CAB03257.1|  323|Caenorhabditis elegans Hypothetical
           protein T01D3.4 protein.
          Length = 323

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 12/32 (37%), Positives = 21/32 (65%)
 Frame = -1

Query: 109 ALICQFYIDAFGS*FIHNYFGLLIQIFTHNAT 14
           +++ QF+I  F   F+H+  GL+I +F  NA+
Sbjct: 249 SVLGQFFIYTFSLLFVHSADGLIICLFHFNAS 280


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,041,396
Number of Sequences: 27780
Number of extensions: 265655
Number of successful extensions: 450
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 436
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 450
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1550199966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)