Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0204
         (713 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase ...    29   0.14 
AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase ...    28   0.33 
U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette...    24   5.4  
U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette...    24   5.4  
U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette...    24   5.4  
AY146748-1|AAO12063.1|  279|Anopheles gambiae odorant-binding pr...    24   5.4  

>AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase
           protein.
          Length = 849

 Score = 29.1 bits (62), Expect = 0.14
 Identities = 15/60 (25%), Positives = 29/60 (48%)
 Frame = +3

Query: 18  KLTLITGLCGMTFGFVVSCVCDTDRTATYLALGSFLPMVLLCGIIWPVEGMHLILQWISY 197
           KL++I G+  M FG  +S V           +  FLP ++   +++      + ++WI+Y
Sbjct: 535 KLSIIFGVVHMIFGVCMSVVNHNFFKKRISIVLEFLPQIIFLVLLFAYMVFMMFMKWIAY 594


>AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase
           protein.
          Length = 808

 Score = 27.9 bits (59), Expect = 0.33
 Identities = 15/60 (25%), Positives = 27/60 (45%)
 Frame = +3

Query: 18  KLTLITGLCGMTFGFVVSCVCDTDRTATYLALGSFLPMVLLCGIIWPVEGMHLILQWISY 197
           KL++I G+  M FG  +S V           L  F+P ++   +++      +  +WI Y
Sbjct: 524 KLSIIFGVVHMIFGVCMSLVNHNHFNRRVNILLEFIPQMMFLVLLFAYMCFMMFFKWIMY 583


>U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 13/70 (18%), Positives = 32/70 (45%)
 Frame = +3

Query: 21  LTLITGLCGMTFGFVVSCVCDTDRTATYLALGSFLPMVLLCGIIWPVEGMHLILQWISYI 200
           +TL+  +   +FG+++SC   +   A  +     +P ++  G       +    +++SY+
Sbjct: 558 VTLVANV-STSFGYLISCASSSISMALSVGPPVVIPFLIFGGFFLNSASVPAYFKYLSYL 616

Query: 201 LPLTKSTESL 230
                + E+L
Sbjct: 617 SWFRYANEAL 626


>U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 13/70 (18%), Positives = 32/70 (45%)
 Frame = +3

Query: 21  LTLITGLCGMTFGFVVSCVCDTDRTATYLALGSFLPMVLLCGIIWPVEGMHLILQWISYI 200
           +TL+  +   +FG+++SC   +   A  +     +P ++  G       +    +++SY+
Sbjct: 558 VTLVANV-STSFGYLISCASSSISMALSVGPPVVIPFLIFGGFFLNSASVPAYFKYLSYL 616

Query: 201 LPLTKSTESL 230
                + E+L
Sbjct: 617 SWFRYANEAL 626


>U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 673

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 13/70 (18%), Positives = 32/70 (45%)
 Frame = +3

Query: 21  LTLITGLCGMTFGFVVSCVCDTDRTATYLALGSFLPMVLLCGIIWPVEGMHLILQWISYI 200
           +TL+  +   +FG+++SC   +   A  +     +P ++  G       +    +++SY+
Sbjct: 536 VTLVANV-STSFGYLISCASSSISMALSVGPPVVIPFLIFGGFFLNSASVPAYFKYLSYL 594

Query: 201 LPLTKSTESL 230
                + E+L
Sbjct: 595 SWFRYANEAL 604


>AY146748-1|AAO12063.1|  279|Anopheles gambiae odorant-binding
           protein AgamOBP41 protein.
          Length = 279

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 21/74 (28%), Positives = 32/74 (43%)
 Frame = +2

Query: 59  FRRVLCL*HRQNSYLPGSWLVPADGVTLRHHMAR*RYAPDSTVDQLHSSAYEIYRVSQID 238
           F   LC  +   +    S  VP D + L+H  +R       T +QL S + E      +D
Sbjct: 133 FESFLCYYYNYGNLRQDSVFVPLDHLQLQHVTSRCMDVHQITTEQLMSLSAE-----AMD 187

Query: 239 ATERLDYQCTHCLL 280
           A ++L     HCL+
Sbjct: 188 ANDKL-----HCLV 196


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 743,262
Number of Sequences: 2352
Number of extensions: 15289
Number of successful extensions: 23
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 73177125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)