Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0203
         (350 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9W0M4 Cluster: CG13887-PB, isoform B; n=9; Endopterygo...    64   8e-10
UniRef50_P51572 Cluster: B-cell receptor-associated protein 31; ...    61   6e-09
UniRef50_Q2F602 Cluster: Endoplasmic reticulum protein; n=1; Bom...    56   1e-07
UniRef50_Q56UG8 Cluster: B cell receptor associated protein-like...    51   6e-06
UniRef50_Q9UHQ4 Cluster: B-cell receptor-associated protein 29; ...    50   1e-05
UniRef50_Q9N3B5 Cluster: Putative uncharacterized protein; n=2; ...    48   6e-05
UniRef50_Q15ET3 Cluster: B-cell receptor-associated protein-like...    46   2e-04
UniRef50_Q4RSC0 Cluster: Chromosome 13 SCAF15000, whole genome s...    44   7e-04
UniRef50_O04034 Cluster: F7G19.17 protein; n=6; Magnoliophyta|Re...    33   1.3  
UniRef50_A3J0U3 Cluster: TonB; n=1; Flavobacteria bacterium BAL3...    31   4.1  
UniRef50_A7P0Z5 Cluster: Chromosome chr19 scaffold_4, whole geno...    31   7.2  

>UniRef50_Q9W0M4 Cluster: CG13887-PB, isoform B; n=9;
           Endopterygota|Rep: CG13887-PB, isoform B - Drosophila
           melanogaster (Fruit fly)
          Length = 228

 Score = 63.7 bits (148), Expect = 8e-10
 Identities = 27/42 (64%), Positives = 34/42 (80%)
 Frame = +3

Query: 219 LQWTIIATFLYTEIAVVLLLTLPIASPSRWQKFFKSKFLAYI 344
           L WT+IA FLY EIA+VLLL LP+ +P RW +FFKSKFL+ +
Sbjct: 3   LVWTLIAGFLYAEIALVLLLVLPVLTPYRWNRFFKSKFLSML 44


>UniRef50_P51572 Cluster: B-cell receptor-associated protein 31;
           n=28; Deuterostomia|Rep: B-cell receptor-associated
           protein 31 - Homo sapiens (Human)
          Length = 246

 Score = 60.9 bits (141), Expect = 6e-09
 Identities = 25/39 (64%), Positives = 30/39 (76%)
 Frame = +3

Query: 219 LQWTIIATFLYTEIAVVLLLTLPIASPSRWQKFFKSKFL 335
           LQWT +ATFLY E+ VVLLL +P  SP RWQK FKS+ +
Sbjct: 3   LQWTAVATFLYAEVFVVLLLCIPFISPKRWQKIFKSRLV 41


>UniRef50_Q2F602 Cluster: Endoplasmic reticulum protein; n=1; Bombyx
           mori|Rep: Endoplasmic reticulum protein - Bombyx mori
           (Silk moth)
          Length = 210

 Score = 56.4 bits (130), Expect = 1e-07
 Identities = 23/40 (57%), Positives = 31/40 (77%)
 Frame = +3

Query: 219 LQWTIIATFLYTEIAVVLLLTLPIASPSRWQKFFKSKFLA 338
           +QWT IA +LY EIA+V+L+ LPI SP RW +FFKS+  +
Sbjct: 3   IQWTFIAGYLYFEIALVMLMILPIFSPRRWNQFFKSRLFS 42


>UniRef50_Q56UG8 Cluster: B cell receptor associated protein-like
           protein; n=1; Lymnaea stagnalis|Rep: B cell receptor
           associated protein-like protein - Lymnaea stagnalis
           (Great pond snail)
          Length = 184

 Score = 50.8 bits (116), Expect = 6e-06
 Identities = 21/43 (48%), Positives = 28/43 (65%)
 Frame = +3

Query: 219 LQWTIIATFLYTEIAVVLLLTLPIASPSRWQKFFKSKFLAYIS 347
           LQWT +A+ LY EI +V  L LP  SP  WQK F+S+  + +S
Sbjct: 3   LQWTFVASVLYVEIFLVAFLMLPFISPKTWQKLFRSRLASSLS 45


>UniRef50_Q9UHQ4 Cluster: B-cell receptor-associated protein 29;
           n=25; Euteleostomi|Rep: B-cell receptor-associated
           protein 29 - Homo sapiens (Human)
          Length = 241

 Score = 50.0 bits (114), Expect = 1e-05
 Identities = 19/34 (55%), Positives = 23/34 (67%)
 Frame = +3

Query: 219 LQWTIIATFLYTEIAVVLLLTLPIASPSRWQKFF 320
           LQW  +ATFLY EI ++L+  LP   P RWQK F
Sbjct: 3   LQWAAVATFLYAEIGLILIFCLPFIPPQRWQKIF 36


>UniRef50_Q9N3B5 Cluster: Putative uncharacterized protein; n=2;
           Caenorhabditis|Rep: Putative uncharacterized protein -
           Caenorhabditis elegans
          Length = 213

 Score = 47.6 bits (108), Expect = 6e-05
 Identities = 20/43 (46%), Positives = 26/43 (60%)
 Frame = +3

Query: 219 LQWTIIATFLYTEIAVVLLLTLPIASPSRWQKFFKSKFLAYIS 347
           LQWTI+A  LY EIA+   L LP   P+ W K FKS+    ++
Sbjct: 3   LQWTIVAGVLYAEIAITFTLLLPWIRPTLWSKLFKSRLFTALA 45


>UniRef50_Q15ET3 Cluster: B-cell receptor-associated protein-like
           protein; n=2; Schistosoma|Rep: B-cell
           receptor-associated protein-like protein - Schistosoma
           mansoni (Blood fluke)
          Length = 240

 Score = 46.0 bits (104), Expect = 2e-04
 Identities = 20/41 (48%), Positives = 25/41 (60%)
 Frame = +3

Query: 225 WTIIATFLYTEIAVVLLLTLPIASPSRWQKFFKSKFLAYIS 347
           W I+  FLY+E+ VVLL+ LP  S   W KFFK   +  IS
Sbjct: 3   WHIVVAFLYSEMFVVLLMILPFFSSQTWSKFFKFSIIQKIS 43


>UniRef50_Q4RSC0 Cluster: Chromosome 13 SCAF15000, whole genome
           shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 13
           SCAF15000, whole genome shotgun sequence - Tetraodon
           nigroviridis (Green puffer)
          Length = 236

 Score = 44.0 bits (99), Expect = 7e-04
 Identities = 19/43 (44%), Positives = 25/43 (58%)
 Frame = +3

Query: 219 LQWTIIATFLYTEIAVVLLLTLPIASPSRWQKFFKSKFLAYIS 347
           LQWT +A FLY EI + L+L +P  S  RW   F  K   ++S
Sbjct: 3   LQWTAVAFFLYAEIGLNLILCIPFISAKRWHLVFNWKIWKWLS 45


>UniRef50_O04034 Cluster: F7G19.17 protein; n=6; Magnoliophyta|Rep:
           F7G19.17 protein - Arabidopsis thaliana (Mouse-ear
           cress)
          Length = 546

 Score = 33.1 bits (72), Expect = 1.3
 Identities = 12/30 (40%), Positives = 21/30 (70%)
 Frame = +3

Query: 252 TEIAVVLLLTLPIASPSRWQKFFKSKFLAY 341
           T ++V+L LT+P  SPS W +F++S  + +
Sbjct: 299 TPVSVLLNLTIPKPSPSEWSRFYRSANIVF 328


>UniRef50_A3J0U3 Cluster: TonB; n=1; Flavobacteria bacterium
           BAL38|Rep: TonB - Flavobacteria bacterium BAL38
          Length = 665

 Score = 31.5 bits (68), Expect = 4.1
 Identities = 14/47 (29%), Positives = 27/47 (57%)
 Frame = +3

Query: 183 NNGVKEIVKS*XLQWTIIATFLYTEIAVVLLLTLPIASPSRWQKFFK 323
           NN ++  ++   L WT+I + +Y  I++V+LL + I   S + +  K
Sbjct: 57  NNAIEIPIQENPLDWTLILSMVYVIISIVILLKIGIEIASFYNRIRK 103


>UniRef50_A7P0Z5 Cluster: Chromosome chr19 scaffold_4, whole genome
           shotgun sequence; n=4; Vitis vinifera|Rep: Chromosome
           chr19 scaffold_4, whole genome shotgun sequence - Vitis
           vinifera (Grape)
          Length = 989

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = -2

Query: 211 DFTISLTPLLXYTMQQTIVEEQQTYDEI 128
           DF+I ++ L  Y + + +++E QTYD I
Sbjct: 414 DFSIDISELTKYWLAEGLIDEHQTYDNI 441


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 313,332,781
Number of Sequences: 1657284
Number of extensions: 5031405
Number of successful extensions: 10396
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 10252
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10395
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 11088517726
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)