Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0201
         (679 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ494421-1|ABF55372.1|   73|Tribolium castaneum telomerase rever...    25   0.75 
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    25   0.75 
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    24   1.3  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    24   1.3  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   5.3  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   7.0  

>DQ494421-1|ABF55372.1|   73|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 73

 Score = 24.6 bits (51), Expect = 0.75
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +1

Query: 250 IVNKVFAAILNLQINTFQTCK 312
           IVN  + +ILN+ +  F+ CK
Sbjct: 18  IVNSKYNSILNIALKNFRLCK 38


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 24.6 bits (51), Expect = 0.75
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +1

Query: 250 IVNKVFAAILNLQINTFQTCK 312
           IVN  + +ILN+ +  F+ CK
Sbjct: 18  IVNSKYNSILNIALKNFRLCK 38


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = +2

Query: 32  SFANFLVNIMRFF*YVPM*RVCGY 103
           S   F +NI+  F YVPM   C Y
Sbjct: 315 SSLRFCLNILSIFTYVPMILYCVY 338


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = +2

Query: 32  SFANFLVNIMRFF*YVPM*RVCGY 103
           S   F +NI+  F YVPM   C Y
Sbjct: 40  SSLRFCLNILSIFTYVPMILYCVY 63


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +2

Query: 461 MYLYTVMYNSV*VFIEGVINFG 526
           +YL+TV Y    V    +INFG
Sbjct: 151 IYLFTVYYIYYSVHEASIINFG 172


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -1

Query: 616 VKFLTRCIWQIHQLTEW 566
           +KFL+RC     +LT W
Sbjct: 677 LKFLSRCRLLSERLTRW 693


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,574
Number of Sequences: 336
Number of extensions: 3222
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17697850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)