Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0200
         (412 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like prote...    26   0.17 
AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH trans...    25   0.29 
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    22   2.0  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    22   2.7  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    21   3.6  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   3.6  
Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    21   6.2  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    20   8.2  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    20   8.2  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    20   8.2  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    20   8.2  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    20   8.2  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    20   8.2  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    20   8.2  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    20   8.2  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    20   8.2  

>AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like protein
           protein.
          Length = 160

 Score = 25.8 bits (54), Expect = 0.17
 Identities = 11/41 (26%), Positives = 25/41 (60%)
 Frame = +2

Query: 38  KNFIHTHKIIKVFLFRSQIELEMRRKLRPGQSM*LKNLQIG 160
           ++++  + + +VF+FR  I L+++ +L+      L  LQ+G
Sbjct: 96  ESYVTGNALYQVFVFRRSIYLQIKERLKTQGISHLDKLQLG 136


>AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH
           transcription factor protein.
          Length = 193

 Score = 25.0 bits (52), Expect = 0.29
 Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
 Frame = -3

Query: 326 HKSTKPTPNQESPIEHQNI*CKVQWNVRTK-YSRTFAS 216
           HKS +  P     I+HQ +   V+   RT+  +  FAS
Sbjct: 81  HKSRRKAPQSFEDIQHQRVMANVRERQRTQSLNEAFAS 118


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 22.2 bits (45), Expect = 2.0
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -1

Query: 373 YMSPPTSFYCLIKLKITNQPSQHPTKS 293
           +  PP S+  LI + I N P +  T S
Sbjct: 138 HAKPPYSYISLITMAIQNSPQKMLTLS 164


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 2.7
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -1

Query: 364 PPTSFYCLIKLKITNQPSQHPT 299
           PP S+  LI + I N P +  T
Sbjct: 84  PPYSYNALIMMAIRNSPEKRLT 105


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 21.4 bits (43), Expect = 3.6
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +1

Query: 85  IPNRTRDETKTSSRTKYVIKKST 153
           +P  T   T+T+  TK+  K ST
Sbjct: 161 LPPTTSTTTRTTLTTKFTTKPST 183


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 3.6
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +2

Query: 182  FGRNMKLIISYKKQKF 229
            F   +K +++YKK+KF
Sbjct: 1193 FDIQLKQVVNYKKKKF 1208


>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
           5-like protein protein.
          Length = 162

 Score = 20.6 bits (41), Expect = 6.2
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -1

Query: 379 CMYMSPPTSFYCLIKLKITNQPSQHP 302
           C Y SP  S + L+   + N P+ +P
Sbjct: 39  CGYHSPLESNHKLVTFILKNPPNLNP 64


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 20.2 bits (40), Expect = 8.2
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +2

Query: 80  FRSQIELEMRRKLR 121
           FR+QIE  + RKLR
Sbjct: 107 FRNQIEALVPRKLR 120


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 20.2 bits (40), Expect = 8.2
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -3

Query: 314 KPTPNQESPIEHQN 273
           K  PN E+ I HQN
Sbjct: 363 KNHPNSENYINHQN 376


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 20.2 bits (40), Expect = 8.2
 Identities = 5/10 (50%), Positives = 8/10 (80%)
 Frame = -2

Query: 156 ICRFFNYILC 127
           +C F+N +LC
Sbjct: 244 VCTFYNILLC 253


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 20.2 bits (40), Expect = 8.2
 Identities = 5/10 (50%), Positives = 8/10 (80%)
 Frame = -2

Query: 156 ICRFFNYILC 127
           +C F+N +LC
Sbjct: 244 VCTFYNILLC 253


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 20.2 bits (40), Expect = 8.2
 Identities = 5/10 (50%), Positives = 8/10 (80%)
 Frame = -2

Query: 156 ICRFFNYILC 127
           +C F+N +LC
Sbjct: 564 VCTFYNILLC 573


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 20.2 bits (40), Expect = 8.2
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = -2

Query: 330 KSQINQANTQPRVTNRASKHLMQSA 256
           KSQ++ A+T   +     KH +Q +
Sbjct: 12  KSQLSTADTANLINKSLGKHNLQKS 36


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 20.2 bits (40), Expect = 8.2
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = -2

Query: 330 KSQINQANTQPRVTNRASKHLMQSA 256
           KSQ++ A+T   +     KH +Q +
Sbjct: 12  KSQLSTADTANLINKSLGKHNLQKS 36


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 20.2 bits (40), Expect = 8.2
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = -2

Query: 330 KSQINQANTQPRVTNRASKHLMQSA 256
           KSQ++ A+T   +     KH +Q +
Sbjct: 12  KSQLSTADTANLINKSLGKHNLQKS 36


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 20.2 bits (40), Expect = 8.2
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -3

Query: 314 KPTPNQESPIEHQN 273
           K  PN E+ I HQN
Sbjct: 311 KNHPNSENYINHQN 324


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,932
Number of Sequences: 336
Number of extensions: 2021
Number of successful extensions: 20
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8963165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)