Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0200
         (412 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            33   0.005
AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dp...    27   0.27 
AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           25   1.4  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    23   4.3  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    23   5.7  
CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein ...    23   5.7  

>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 32.7 bits (71), Expect = 0.005
 Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
 Frame = +1

Query: 46   YTYSQNYKSISI*IPNRTRDETKTSSRTKYVIKKSTDWSHSERQSLWK-EYEIDY 207
            YTYS+ Y  +   +P +     KT+SRT+  +         + ++LW+  YE DY
Sbjct: 1877 YTYSETYGHLIEVLPPQFHALAKTTSRTRPFLTGGNTQEEIKLRNLWRVSYEYDY 1931


>AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dpp
           protein.
          Length = 474

 Score = 27.1 bits (57), Expect = 0.27
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = +1

Query: 121 SRTKYVIKKSTDWSHSERQSLWKEYEIDYLIQEAK 225
           S T   +KK   W   + +  W E  +D L+++ K
Sbjct: 22  SFTSPAVKKLLGWKQGDEEEKWAEKAVDSLVKKLK 56


>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 24.6 bits (51), Expect = 1.4
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -1

Query: 319 QPSQHPTKSHQSSIKTSDAKCNGM 248
           QPSQ P  S QS+ + ++   NG+
Sbjct: 290 QPSQQPQPSSQSNAQLTNGGSNGL 313


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 23.0 bits (47), Expect = 4.3
 Identities = 13/50 (26%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
 Frame = -3

Query: 350 LLSHQT*NHKSTKPTPNQESPIEHQNI*CKVQWNV---RTKYSRTFASCM 210
           ++S+   N++   P+PNQ+   +H +   + Q  +    T YSR  +  M
Sbjct: 762 VISYNNMNNRRIVPSPNQQQQQQHHHHHLQQQQQIVGKNTLYSRNSSERM 811


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 22.6 bits (46), Expect = 5.7
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = +1

Query: 1   HEDRLYFISSNLKELYTYSQNYKS 72
           H D + ++   L+++Y Y+QN +S
Sbjct: 559 HRDDVRWVIVALRQMYDYNQNGES 582


>CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein
           protein.
          Length = 615

 Score = 22.6 bits (46), Expect = 5.7
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = -2

Query: 366 LLQPPSIVSSNLKSQINQANTQPRVTNRASKHL 268
           LLQ   + SSNLKS     NT+    ++ ++HL
Sbjct: 82  LLQKSRLKSSNLKSTTYTRNTE---NDKLTRHL 111


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 430,016
Number of Sequences: 2352
Number of extensions: 7882
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 33349914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)