Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0200
         (412 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC016478-1|AAH16478.2|  478|Homo sapiens TMEM161A protein protein.     29   7.9  
BC005210-1|AAH05210.1|  479|Homo sapiens transmembrane protein 1...    29   7.9  
AY358088-1|AAQ88455.1|  479|Homo sapiens AVLG582 protein.              29   7.9  
AK000429-1|BAA91159.1|  479|Homo sapiens protein ( Homo sapiens ...    29   7.9  

>BC016478-1|AAH16478.2|  478|Homo sapiens TMEM161A protein protein.
          Length = 478

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = -2

Query: 189 LPKTLPLRVAPICRFFNYILCPGRSFR 109
           L  TL  R+AP C F  ++LC G  FR
Sbjct: 12  LTATLMHRLAPHCSFARWLLCNGSLFR 38


>BC005210-1|AAH05210.1|  479|Homo sapiens transmembrane protein 161A
           protein.
          Length = 479

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = -2

Query: 189 LPKTLPLRVAPICRFFNYILCPGRSFR 109
           L  TL  R+AP C F  ++LC G  FR
Sbjct: 13  LTATLMHRLAPHCSFARWLLCNGSLFR 39


>AY358088-1|AAQ88455.1|  479|Homo sapiens AVLG582 protein.
          Length = 479

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = -2

Query: 189 LPKTLPLRVAPICRFFNYILCPGRSFR 109
           L  TL  R+AP C F  ++LC G  FR
Sbjct: 13  LTATLMHRLAPHCSFARWLLCNGSLFR 39


>AK000429-1|BAA91159.1|  479|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20422 fis, clone KAT02572. ).
          Length = 479

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = -2

Query: 189 LPKTLPLRVAPICRFFNYILCPGRSFR 109
           L  TL  R+AP C F  ++LC G  FR
Sbjct: 13  LTATLMHRLAPHCSFARWLLCNGSLFR 39


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,215,652
Number of Sequences: 237096
Number of extensions: 1148559
Number of successful extensions: 2135
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2096
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2135
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3030544982
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)