BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= NRPG0198 (739 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPBC1604.12 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 28 1.6 SPCC16C4.02c |||DUF1941 family protein|Schizosaccharomyces pombe... 27 3.7 SPACUNK4.08 |||dipeptidyl aminopeptidase |Schizosaccharomyces po... 26 6.4 SPCC297.05 |||diacylglycerol binding protein |Schizosaccharomyce... 25 8.5 SPBC19C2.05 |ran1|pat1|serine/threonine protein kinase Ran1|Schi... 25 8.5 SPCC16C4.04 |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 25 8.5 >SPBC1604.12 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||Manual Length = 860 Score = 27.9 bits (59), Expect = 1.6 Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 1/33 (3%) Frame = +2 Query: 239 YPNAPPNTPIVQNP-YATVMSPTKRQWTEMEEP 334 YPNAP + V NP + PT+R + + E+P Sbjct: 413 YPNAPTSAVSVHNPTISDEAEPTERAFLKKEKP 445 >SPCC16C4.02c |||DUF1941 family protein|Schizosaccharomyces pombe|chr 3|||Manual Length = 548 Score = 26.6 bits (56), Expect = 3.7 Identities = 12/40 (30%), Positives = 20/40 (50%) Frame = -3 Query: 461 LHNPIYPLQQPSVQAVEEPLSTAVNQKRNWKYSTCLIFFA 342 L N +Y L +VQ P+ ++++R WK FF+ Sbjct: 200 LSNALYALD--NVQTYMRPIFQGIDKRRGWKLDCTFSFFS 237 >SPACUNK4.08 |||dipeptidyl aminopeptidase |Schizosaccharomyces pombe|chr 1|||Manual Length = 793 Score = 25.8 bits (54), Expect = 6.4 Identities = 18/57 (31%), Positives = 24/57 (42%) Frame = +2 Query: 191 IFVATFNFFVYSTSTGYPNAPPNTPIVQNPYATVMSPTKRQWTEMEEPGKWQRILDT 361 +FVA N S + + N P P+VQN S Q+T R+LDT Sbjct: 291 LFVADLNSNASSNFSLWHNEPLAEPVVQNVLWVNTSSVLVQFTNRNSTCITARLLDT 347 >SPCC297.05 |||diacylglycerol binding protein |Schizosaccharomyces pombe|chr 3|||Manual Length = 973 Score = 25.4 bits (53), Expect = 8.5 Identities = 10/35 (28%), Positives = 19/35 (54%) Frame = +2 Query: 209 NFFVYSTSTGYPNAPPNTPIVQNPYATVMSPTKRQ 313 N F + +TG + P P + ++T +PTK++ Sbjct: 66 NTFAHHNTTGSNSVGPKKPFLDYHHSTSNTPTKKK 100 >SPBC19C2.05 |ran1|pat1|serine/threonine protein kinase Ran1|Schizosaccharomyces pombe|chr 2|||Manual Length = 470 Score = 25.4 bits (53), Expect = 8.5 Identities = 11/25 (44%), Positives = 13/25 (52%) Frame = +2 Query: 236 GYPNAPPNTPIVQNPYATVMSPTKR 310 GYPN PP TPI + +P R Sbjct: 434 GYPNQPPLTPIPFTGFVLHPAPVGR 458 >SPCC16C4.04 |||sequence orphan|Schizosaccharomyces pombe|chr 3|||Manual Length = 266 Score = 25.4 bits (53), Expect = 8.5 Identities = 9/15 (60%), Positives = 11/15 (73%) Frame = +2 Query: 287 TVMSPTKRQWTEMEE 331 T+M +R WTEMEE Sbjct: 56 TIMCEQRRSWTEMEE 70 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,906,167 Number of Sequences: 5004 Number of extensions: 60858 Number of successful extensions: 162 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 155 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 162 length of database: 2,362,478 effective HSP length: 71 effective length of database: 2,007,194 effective search space used: 349251756 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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