Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0198
         (739 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY128493-1|AAM75086.1|  231|Drosophila melanogaster RH42635p pro...    31   1.2  
AE014298-918|AAF46182.3|  231|Drosophila melanogaster CG3977-PA ...    31   1.2  
U42403-1|AAB02355.1| 1180|Drosophila melanogaster stripe a prote...    31   2.2  
U42402-1|AAB02354.1|  906|Drosophila melanogaster stripe b prote...    31   2.2  
AE014297-2438|AAN13756.1|  906|Drosophila melanogaster CG7847-PB...    31   2.2  
AE014297-2437|AAF55492.1| 1186|Drosophila melanogaster CG7847-PA...    31   2.2  

>AY128493-1|AAM75086.1|  231|Drosophila melanogaster RH42635p
           protein.
          Length = 231

 Score = 31.5 bits (68), Expect = 1.2
 Identities = 15/43 (34%), Positives = 21/43 (48%)
 Frame = +2

Query: 179 YK*YIFVATFNFFVYSTSTGYPNAPPNTPIVQNPYATVMSPTK 307
           Y+ Y+F  T+N   Y   TG P   P  P + +P A   SP +
Sbjct: 124 YREYLFWKTYNLLEYRPVTG-PQRNPEAPRIPSPAAAAPSPVQ 165


>AE014298-918|AAF46182.3|  231|Drosophila melanogaster CG3977-PA
           protein.
          Length = 231

 Score = 31.5 bits (68), Expect = 1.2
 Identities = 15/43 (34%), Positives = 21/43 (48%)
 Frame = +2

Query: 179 YK*YIFVATFNFFVYSTSTGYPNAPPNTPIVQNPYATVMSPTK 307
           Y+ Y+F  T+N   Y   TG P   P  P + +P A   SP +
Sbjct: 124 YREYLFWKTYNLLEYRPVTG-PQRNPEAPRIPSPAAAAPSPVQ 165


>U42403-1|AAB02355.1| 1180|Drosophila melanogaster stripe a protein
            protein.
          Length = 1180

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = +2

Query: 239  YPNAPPNTPIVQNPYATVMSPTKRQWTEMEEPGKWQRI 352
            YPN P  TP+ + PYA  +    R+++  +E  +  RI
Sbjct: 1016 YPNRPSKTPVHERPYACPVENCDRRFSRSDELTRHIRI 1053


>U42402-1|AAB02354.1|  906|Drosophila melanogaster stripe b protein
           protein.
          Length = 906

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = +2

Query: 239 YPNAPPNTPIVQNPYATVMSPTKRQWTEMEEPGKWQRI 352
           YPN P  TP+ + PYA  +    R+++  +E  +  RI
Sbjct: 742 YPNRPSKTPVHERPYACPVENCDRRFSRSDELTRHIRI 779


>AE014297-2438|AAN13756.1|  906|Drosophila melanogaster CG7847-PB,
           isoform B protein.
          Length = 906

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = +2

Query: 239 YPNAPPNTPIVQNPYATVMSPTKRQWTEMEEPGKWQRI 352
           YPN P  TP+ + PYA  +    R+++  +E  +  RI
Sbjct: 742 YPNRPSKTPVHERPYACPVENCDRRFSRSDELTRHIRI 779


>AE014297-2437|AAF55492.1| 1186|Drosophila melanogaster CG7847-PA,
            isoform A protein.
          Length = 1186

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = +2

Query: 239  YPNAPPNTPIVQNPYATVMSPTKRQWTEMEEPGKWQRI 352
            YPN P  TP+ + PYA  +    R+++  +E  +  RI
Sbjct: 1022 YPNRPSKTPVHERPYACPVENCDRRFSRSDELTRHIRI 1059


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,981,777
Number of Sequences: 53049
Number of extensions: 670262
Number of successful extensions: 1626
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1565
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1626
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3334818762
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)