Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0197
         (668 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    25   0.74 
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    23   1.7  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    23   1.7  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   6.9  

>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 24.6 bits (51), Expect = 0.74
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = -2

Query: 577 RFEGWGSRCNYTETLELISRGGWRI 503
           ++ G      Y E +EL   GGW++
Sbjct: 289 KYTGEAGMLGYNEIVELQKEGGWKV 313


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -1

Query: 488 LWASVTT*HQVGCELVHSSNLXXXXXKQSRNFT 390
           LWA+V T  QV  E+   SN       Q +NF+
Sbjct: 280 LWATVYTSSQVTREVQSRSNRMTPLKLQPQNFS 312


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -1

Query: 488 LWASVTT*HQVGCELVHSSNLXXXXXKQSRNFT 390
           LWA+V T  QV  E+   SN       Q +NF+
Sbjct: 276 LWATVYTSSQVTREVQSRSNRMTPLKLQPQNFS 308


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = -2

Query: 583 AFRFEGWGSRCNYTETLELISRGGW 509
           A R+ G      Y E +E  + GGW
Sbjct: 291 AGRYTGERGMMGYNEIVEAQNAGGW 315


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,012
Number of Sequences: 336
Number of extensions: 3740
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17385535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)