Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0196
(669 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
U61151-1|AAB41306.1| 45|Tribolium castaneum TATH1 protein. 27 0.11
AY321476-1|AAQ23386.1| 253|Tribolium castaneum Ash protein. 27 0.11
AY321476-2|AAQ23387.1| 257|Tribolium castaneum Ase protein. 25 0.42
U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein. 24 0.98
U81038-1|AAB39355.1| 412|Tribolium castaneum transcription fact... 24 0.98
AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein. 24 0.98
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 23 2.3
AJ223627-1|CAA11500.1| 371|Tribolium castaneum orthodenticle-1 ... 22 4.0
AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B prot... 22 4.0
AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 22 5.2
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 22 5.2
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 22 5.2
DQ342040-1|ABC69932.1| 822|Tribolium castaneum STIP protein. 21 9.1
AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone recepto... 21 9.1
AM292336-1|CAL23148.2| 455|Tribolium castaneum gustatory recept... 21 9.1
AJ518941-1|CAD57735.1| 456|Tribolium castaneum homothorax protein. 21 9.1
AF317551-1|AAG39634.1| 312|Tribolium castaneum distal-less prot... 21 9.1
>U61151-1|AAB41306.1| 45|Tribolium castaneum TATH1 protein.
Length = 45
Score = 27.5 bits (58), Expect = 0.11
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +1
Query: 166 KLQDLVPFMPKNRKISKLEVIQHVIDY 246
+L+D+VP + +RK+SK E +Q Y
Sbjct: 19 RLRDVVPSLGNDRKLSKFETLQMAQTY 45
>AY321476-1|AAQ23386.1| 253|Tribolium castaneum Ash protein.
Length = 253
Score = 27.5 bits (58), Expect = 0.11
Identities = 9/27 (33%), Positives = 20/27 (74%)
Frame = +1
Query: 199 NRKISKLEVIQHVIDYICDLQSALENH 279
++K+SK+E ++ ++YI L+ +E+H
Sbjct: 132 SKKLSKVETLRLAVEYIRSLKQMIEDH 158
>AY321476-2|AAQ23387.1| 257|Tribolium castaneum Ase protein.
Length = 257
Score = 25.4 bits (53), Expect = 0.42
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = +1
Query: 199 NRKISKLEVIQHVIDYICDLQSAL 270
N+K+SK+E ++ ++YI L+ L
Sbjct: 95 NKKLSKVETLRMAVEYIRSLEDLL 118
>U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein.
Length = 283
Score = 24.2 bits (50), Expect = 0.98
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = -3
Query: 211 RSFYSWA*RVRDPGASRGTF 152
R Y W +V GAS GTF
Sbjct: 208 RQIYPWMRKVHVAGASNGTF 227
>U81038-1|AAB39355.1| 412|Tribolium castaneum transcription factor
Deformed protein.
Length = 412
Score = 24.2 bits (50), Expect = 0.98
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = -3
Query: 211 RSFYSWA*RVRDPGASRGTF 152
R Y W +V GAS GTF
Sbjct: 208 RQIYPWMRKVHVAGASNGTF 227
>AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein.
Length = 412
Score = 24.2 bits (50), Expect = 0.98
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = -3
Query: 211 RSFYSWA*RVRDPGASRGTF 152
R Y W +V GAS GTF
Sbjct: 208 RQIYPWMRKVHVAGASNGTF 227
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
protein protein.
Length = 1156
Score = 23.0 bits (47), Expect = 2.3
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +3
Query: 333 SVAAAPPSEETARPSP 380
+ + APP EE A P+P
Sbjct: 42 AASPAPPEEEAASPTP 57
>AJ223627-1|CAA11500.1| 371|Tribolium castaneum orthodenticle-1
protein protein.
Length = 371
Score = 22.2 bits (45), Expect = 4.0
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +2
Query: 386 PTPSSANHPPHTNTEIKRHQKNKTNLTG 469
PTPS++ PP N + + Q TG
Sbjct: 225 PTPSTSASPPTVNIKKESPQMQSYRPTG 252
>AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B
protein.
Length = 351
Score = 22.2 bits (45), Expect = 4.0
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = +3
Query: 312 LSVATLRSVAAAPPSEETARPSPYAQHHPPQITLHTRTQKS 434
+S + + S AAAPP T+ SP + LH +++
Sbjct: 22 ISSSGMTSPAAAPPPATTSSGSPASVASNASAPLHIPAKRA 62
>AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger
protein protein.
Length = 456
Score = 21.8 bits (44), Expect = 5.2
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = +2
Query: 392 PSSANHPPHTNTEIKRHQKNKTNLTGR 472
P + + PP N+ + HQ T+L G+
Sbjct: 121 PGATSQPPTDNSHVHHHQ---TSLLGK 144
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 21.8 bits (44), Expect = 5.2
Identities = 7/30 (23%), Positives = 19/30 (63%)
Frame = +1
Query: 25 PVFVFSDSRMKAITAVCATGASVPAIASGR 114
P+F ++ + +T + +T ++ P+I++ R
Sbjct: 1386 PIFYLDEAFQRRVTQIGSTSSNNPSISAFR 1415
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
protein.
Length = 1464
Score = 21.8 bits (44), Expect = 5.2
Identities = 7/30 (23%), Positives = 19/30 (63%)
Frame = +1
Query: 25 PVFVFSDSRMKAITAVCATGASVPAIASGR 114
P+F ++ + +T + +T ++ P+I++ R
Sbjct: 1386 PIFYLDEAFQRRVTQIGSTSSNNPSISAFR 1415
>DQ342040-1|ABC69932.1| 822|Tribolium castaneum STIP protein.
Length = 822
Score = 21.0 bits (42), Expect = 9.1
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = -2
Query: 176 SWSFERYICISAFSPSRC 123
+W IC+SA++P C
Sbjct: 477 TWMPVMRICVSAWNPKDC 494
>AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone receptor
(isoform A) protein.
Length = 549
Score = 21.0 bits (42), Expect = 9.1
Identities = 11/37 (29%), Positives = 17/37 (45%)
Frame = +1
Query: 58 AITAVCATGASVPAIASGRVQRHRDGENAEIQMYLSK 168
A+T G +I V + + G N EI MY+ +
Sbjct: 202 ALTCEGCKGFFRRSITKNAVYQCKYGNNCEIDMYMRR 238
>AM292336-1|CAL23148.2| 455|Tribolium castaneum gustatory receptor
candidate 15 protein.
Length = 455
Score = 21.0 bits (42), Expect = 9.1
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = -3
Query: 451 VFLVPFDFCVRVWRVICGGW 392
+FLV F + W V GGW
Sbjct: 124 LFLVIFVLNIWCWIVEIGGW 143
>AJ518941-1|CAD57735.1| 456|Tribolium castaneum homothorax protein.
Length = 456
Score = 21.0 bits (42), Expect = 9.1
Identities = 9/31 (29%), Positives = 12/31 (38%)
Frame = +2
Query: 386 PTPSSANHPPHTNTEIKRHQKNKTNLTGRRV 478
P +H PH N + + N N T V
Sbjct: 34 PGLQGLHHSPHLNHAMHPYHANHVNPTANHV 64
>AF317551-1|AAG39634.1| 312|Tribolium castaneum distal-less
protein.
Length = 312
Score = 21.0 bits (42), Expect = 9.1
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -2
Query: 125 CRCTRPLAIAGTEAP 81
CR R L +AGT +P
Sbjct: 251 CRDNRLLVLAGTSSP 265
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,403
Number of Sequences: 336
Number of extensions: 2945
Number of successful extensions: 17
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17385535
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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