Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0195
         (669 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic acetylch...    25   1.6  
AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic acetylch...    25   1.6  
AY341194-1|AAR13758.1|  294|Anopheles gambiae laminin protein.         25   2.9  
AY341193-1|AAR13757.1|  294|Anopheles gambiae laminin protein.         25   2.9  
AY341192-1|AAR13756.1|  294|Anopheles gambiae laminin protein.         25   2.9  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    25   2.9  
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           24   3.8  
CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ...    24   5.0  
AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic acetylch...    24   5.0  
AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic acetylch...    24   5.0  

>AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = -2

Query: 92  SADSGNSSYTINVNIIVFESSSCRFLQPG 6
           SAD G    T + NI+V  + SC ++ PG
Sbjct: 115 SADEGFDG-TYHTNIVVKNNGSCLYVPPG 142


>AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = -2

Query: 92  SADSGNSSYTINVNIIVFESSSCRFLQPG 6
           SAD G    T + NI+V  + SC ++ PG
Sbjct: 115 SADEGFDG-TYHTNIVVKNNGSCLYVPPG 142


>AY341194-1|AAR13758.1|  294|Anopheles gambiae laminin protein.
          Length = 294

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = +3

Query: 240 IIRASDIYGSE-DRFLRSLVNKMRSHSNLM 326
           I + ++ Y  E DR    L NKMR H+ L+
Sbjct: 157 IKKEANQYNREADRIAEDLANKMRDHAQLL 186


>AY341193-1|AAR13757.1|  294|Anopheles gambiae laminin protein.
          Length = 294

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = +3

Query: 240 IIRASDIYGSE-DRFLRSLVNKMRSHSNLM 326
           I + ++ Y  E DR    L NKMR H+ L+
Sbjct: 157 IKKEANQYNREADRIAEDLANKMRDHAQLL 186


>AY341192-1|AAR13756.1|  294|Anopheles gambiae laminin protein.
          Length = 294

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = +3

Query: 240 IIRASDIYGSE-DRFLRSLVNKMRSHSNLM 326
           I + ++ Y  E DR    L NKMR H+ L+
Sbjct: 157 IKKEANQYNREADRIAEDLANKMRDHAQLL 186


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
            precursor protein.
          Length = 1623

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = +3

Query: 240  IIRASDIYGSE-DRFLRSLVNKMRSHSNLM 326
            I + ++ Y  E DR    L NKMR H+ L+
Sbjct: 1296 IKKEANQYNREADRIAEDLANKMRDHAQLL 1325


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +3

Query: 96  EGVERFIHLSYLNAEEHPKPLVLKKPSAW 182
           EG   F+    L A+ HP+ +V    +AW
Sbjct: 156 EGFAEFVEAIELEAQSHPQVVVAGDFNAW 184


>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
           protein.
          Length = 1087

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = +3

Query: 321 LMPLYKNGLATVKQPVFVSDVAQGIVNAARDDD 419
           L+ L KN     KQ V+V DVAQG+ +   D D
Sbjct: 75  LITLNKNPQKN-KQFVYVEDVAQGVDSGLLDLD 106


>AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 7 protein.
          Length = 509

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -2

Query: 92  SADSGNSSYTINVNIIVFESSSCRFLQPG 6
           SAD G    T   N++V  + SC ++ PG
Sbjct: 98  SADEGFDG-TYPTNVVVRNNGSCLYVPPG 125


>AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 5 protein.
          Length = 533

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -2

Query: 92  SADSGNSSYTINVNIIVFESSSCRFLQPG 6
           SAD G    T   N++V  + SC ++ PG
Sbjct: 130 SADEGFDG-TYPTNVVVRNNGSCLYVPPG 157


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 693,548
Number of Sequences: 2352
Number of extensions: 14227
Number of successful extensions: 26
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66904800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)