Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0195
(669 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L04490-1|AAA36350.1| 375|Homo sapiens NADH dehydrogenase (ubiqu... 118 1e-26
BC111546-1|AAI11547.1| 377|Homo sapiens NADH dehydrogenase (ubi... 118 1e-26
BC015837-1|AAH15837.1| 377|Homo sapiens NADH dehydrogenase (ubi... 118 1e-26
BC009311-1|AAH09311.1| 377|Homo sapiens NADH dehydrogenase (ubi... 118 1e-26
BC003351-1|AAH03351.1| 338|Homo sapiens Similar to NADH dehydro... 118 1e-26
AF050641-1|AAD42055.1| 377|Homo sapiens NADH-ubiquinone oxidore... 118 1e-26
U49356-1|AAA90924.1| 2285|Homo sapiens DNA polymerase epsilon ca... 34 0.40
S60080-1|AAA15448.1| 2257|Homo sapiens DNA polymerase epsilon ca... 34 0.40
L09561-1|AAC19148.1| 2286|Homo sapiens DNA polymerase epsilon, c... 34 0.40
BC087613-1|AAH87613.1| 797|Homo sapiens POLE protein protein. 34 0.40
BC007599-1|AAH07599.1| 797|Homo sapiens Unknown (protein for IM... 34 0.40
AY273166-1|AAP12650.1| 2265|Homo sapiens polymerase (DNA directe... 34 0.40
AF127975-3|AAD44692.1| 2243|Homo sapiens DNA polymerase epsilon ... 34 0.40
AF127975-2|AAD44691.1| 2286|Homo sapiens DNA polymerase epsilon ... 34 0.40
AF127975-1|AAD44690.1| 2297|Homo sapiens DNA polymerase epsilon ... 34 0.40
BC060860-1|AAH60860.2| 518|Homo sapiens family with sequence si... 31 2.8
AK074867-1|BAC11255.1| 519|Homo sapiens protein ( Homo sapiens ... 31 2.8
L04288-1|AAA35734.2| 1462|Homo sapiens cyclophilin-related prote... 31 3.7
BX957215-1|CAF29506.1| 1162|Homo sapiens hypothetical protein pr... 31 3.7
AF184110-1|AAD56402.1| 1462|Homo sapiens cyclophilin-related pro... 31 3.7
>L04490-1|AAA36350.1| 375|Homo sapiens NADH dehydrogenase
(ubiquinone) protein.
Length = 375
Score = 118 bits (285), Expect = 1e-26
Identities = 66/157 (42%), Positives = 95/157 (60%)
Frame = +3
Query: 36 FKYNDVHVDGVRRIARICREEGVERFIHLSYLNAEEHPKPLVLKKPSAWKISKYLGECAV 215
F + DV V + IA++ +E GVE+FIH+S+LNA +K S + +K +GE V
Sbjct: 137 FDFEDVFVKIPQAIAQLSKEAGVEKFIHVSHLNAN-------IKSSSRYLRNKAVGEKVV 189
Query: 216 REEYPTATIIRASDIYGSEDRFLRSLVNKMRSHSNLMPLYKNGLATVKQPVFVSDVAQGI 395
R+ +P A I++ SDI+G EDRFL S + R +PL G TVKQPV+V DV++GI
Sbjct: 190 RDAFPEAIIVKPSDIFGREDRFLNSFASMHRFGP--IPLGSLGWKTVKQPVYVVDVSKGI 247
Query: 396 VNAARDDDTKCEVYQAVGPKRYLLADLVDWFYKLMRK 506
VNA +D D + + VGP RYLL LV + + + +
Sbjct: 248 VNAVKDPDANGKSFAFVGPSRYLLFHLVKYIFAVAHR 284
>BC111546-1|AAI11547.1| 377|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 alpha subcomplex, 9, 39kDa protein.
Length = 377
Score = 118 bits (285), Expect = 1e-26
Identities = 66/157 (42%), Positives = 95/157 (60%)
Frame = +3
Query: 36 FKYNDVHVDGVRRIARICREEGVERFIHLSYLNAEEHPKPLVLKKPSAWKISKYLGECAV 215
F + DV V + IA++ +E GVE+FIH+S+LNA +K S + +K +GE V
Sbjct: 139 FDFEDVFVKIPQAIAQLSKEAGVEKFIHVSHLNAN-------IKSSSRYLRNKAVGEKVV 191
Query: 216 REEYPTATIIRASDIYGSEDRFLRSLVNKMRSHSNLMPLYKNGLATVKQPVFVSDVAQGI 395
R+ +P A I++ SDI+G EDRFL S + R +PL G TVKQPV+V DV++GI
Sbjct: 192 RDAFPEAIIVKPSDIFGREDRFLNSFASMHRFGP--IPLGSLGWKTVKQPVYVVDVSKGI 249
Query: 396 VNAARDDDTKCEVYQAVGPKRYLLADLVDWFYKLMRK 506
VNA +D D + + VGP RYLL LV + + + +
Sbjct: 250 VNAVKDPDANGKSFAFVGPSRYLLFHLVKYIFAVAHR 286
>BC015837-1|AAH15837.1| 377|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 alpha subcomplex, 9, 39kDa protein.
Length = 377
Score = 118 bits (285), Expect = 1e-26
Identities = 66/157 (42%), Positives = 95/157 (60%)
Frame = +3
Query: 36 FKYNDVHVDGVRRIARICREEGVERFIHLSYLNAEEHPKPLVLKKPSAWKISKYLGECAV 215
F + DV V + IA++ +E GVE+FIH+S+LNA +K S + +K +GE V
Sbjct: 139 FDFEDVFVKIPQAIAQLSKEAGVEKFIHVSHLNAN-------IKSSSRYLRNKAVGEKVV 191
Query: 216 REEYPTATIIRASDIYGSEDRFLRSLVNKMRSHSNLMPLYKNGLATVKQPVFVSDVAQGI 395
R+ +P A I++ SDI+G EDRFL S + R +PL G TVKQPV+V DV++GI
Sbjct: 192 RDAFPEAIIVKPSDIFGREDRFLNSFASMHRFGP--IPLGSLGWKTVKQPVYVVDVSKGI 249
Query: 396 VNAARDDDTKCEVYQAVGPKRYLLADLVDWFYKLMRK 506
VNA +D D + + VGP RYLL LV + + + +
Sbjct: 250 VNAVKDPDANGKSFAFVGPSRYLLFHLVKYIFAVAHR 286
>BC009311-1|AAH09311.1| 377|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 alpha subcomplex, 9, 39kDa protein.
Length = 377
Score = 118 bits (285), Expect = 1e-26
Identities = 66/157 (42%), Positives = 95/157 (60%)
Frame = +3
Query: 36 FKYNDVHVDGVRRIARICREEGVERFIHLSYLNAEEHPKPLVLKKPSAWKISKYLGECAV 215
F + DV V + IA++ +E GVE+FIH+S+LNA +K S + +K +GE V
Sbjct: 139 FDFEDVFVKIPQAIAQLSKEAGVEKFIHVSHLNAN-------IKSSSRYLRNKAVGEKVV 191
Query: 216 REEYPTATIIRASDIYGSEDRFLRSLVNKMRSHSNLMPLYKNGLATVKQPVFVSDVAQGI 395
R+ +P A I++ SDI+G EDRFL S + R +PL G TVKQPV+V DV++GI
Sbjct: 192 RDAFPEAIIVKPSDIFGREDRFLNSFASMHRFGP--IPLGSLGWKTVKQPVYVVDVSKGI 249
Query: 396 VNAARDDDTKCEVYQAVGPKRYLLADLVDWFYKLMRK 506
VNA +D D + + VGP RYLL LV + + + +
Sbjct: 250 VNAVKDPDANGKSFAFVGPSRYLLFHLVKYIFAVAHR 286
>BC003351-1|AAH03351.1| 338|Homo sapiens Similar to NADH
dehydrogenase (ubiquinone) 1 alpha subcomplex, 9 (39kD)
protein.
Length = 338
Score = 118 bits (285), Expect = 1e-26
Identities = 66/157 (42%), Positives = 95/157 (60%)
Frame = +3
Query: 36 FKYNDVHVDGVRRIARICREEGVERFIHLSYLNAEEHPKPLVLKKPSAWKISKYLGECAV 215
F + DV V + IA++ +E GVE+FIH+S+LNA +K S + +K +GE V
Sbjct: 100 FDFEDVFVKIPQAIAQLSKEAGVEKFIHVSHLNAN-------IKSSSRYLRNKAVGEKVV 152
Query: 216 REEYPTATIIRASDIYGSEDRFLRSLVNKMRSHSNLMPLYKNGLATVKQPVFVSDVAQGI 395
R+ +P A I++ SDI+G EDRFL S + R +PL G TVKQPV+V DV++GI
Sbjct: 153 RDAFPEAIIVKPSDIFGREDRFLNSFASMHRFGP--IPLGSLGWKTVKQPVYVVDVSKGI 210
Query: 396 VNAARDDDTKCEVYQAVGPKRYLLADLVDWFYKLMRK 506
VNA +D D + + VGP RYLL LV + + + +
Sbjct: 211 VNAVKDPDANGKSFAFVGPSRYLLFHLVKYIFAVAHR 247
>AF050641-1|AAD42055.1| 377|Homo sapiens NADH-ubiquinone
oxidoreductase 39kDa subunit protein.
Length = 377
Score = 118 bits (285), Expect = 1e-26
Identities = 66/157 (42%), Positives = 95/157 (60%)
Frame = +3
Query: 36 FKYNDVHVDGVRRIARICREEGVERFIHLSYLNAEEHPKPLVLKKPSAWKISKYLGECAV 215
F + DV V + IA++ +E GVE+FIH+S+LNA +K S + +K +GE V
Sbjct: 139 FDFEDVFVKIPQAIAQLSKEAGVEKFIHVSHLNAN-------IKSSSRYLRNKAVGEKVV 191
Query: 216 REEYPTATIIRASDIYGSEDRFLRSLVNKMRSHSNLMPLYKNGLATVKQPVFVSDVAQGI 395
R+ +P A I++ SDI+G EDRFL S + R +PL G TVKQPV+V DV++GI
Sbjct: 192 RDAFPEAIIVKPSDIFGREDRFLNSFASMHRFGP--IPLGSLGWKTVKQPVYVVDVSKGI 249
Query: 396 VNAARDDDTKCEVYQAVGPKRYLLADLVDWFYKLMRK 506
VNA +D D + + VGP RYLL LV + + + +
Sbjct: 250 VNAVKDPDANGKSFAFVGPSRYLLFHLVKYIFAVAHR 286
>U49356-1|AAA90924.1| 2285|Homo sapiens DNA polymerase epsilon
catalytic subunit protein.
Length = 2285
Score = 34.3 bits (75), Expect = 0.40
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = +3
Query: 84 ICREEGVERFIHLSYLNAEEHPKPLVLKKPSAWKISKYLGECAVREEYPTATIIRASDI- 260
ICR ++RF+ L+Y EE P ++ S+W++ + E V EE+P I A I
Sbjct: 1563 ICR--AIQRFL-LAY--KEERRGPTLIAVQSSWELKRLASEIPVLEEFPLVPICVADKIN 1617
Query: 261 YGSEDRFLRSLVNKMRSHSNL 323
YG D +R + NL
Sbjct: 1618 YGVLDWQRHGARRMIRHYLNL 1638
>S60080-1|AAA15448.1| 2257|Homo sapiens DNA polymerase epsilon
catalytic subunit protein.
Length = 2257
Score = 34.3 bits (75), Expect = 0.40
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = +3
Query: 84 ICREEGVERFIHLSYLNAEEHPKPLVLKKPSAWKISKYLGECAVREEYPTATIIRASDI- 260
ICR ++RF+ L+Y EE P ++ S+W++ + E V EE+P I A I
Sbjct: 1535 ICR--AIQRFL-LAY--KEERRGPTLIAVQSSWELKRLASEIPVLEEFPLVPICVADKIN 1589
Query: 261 YGSEDRFLRSLVNKMRSHSNL 323
YG D +R + NL
Sbjct: 1590 YGVLDWQRHGARRMIRHYLNL 1610
>L09561-1|AAC19148.1| 2286|Homo sapiens DNA polymerase epsilon,
catalytic polypeptide protein.
Length = 2286
Score = 34.3 bits (75), Expect = 0.40
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = +3
Query: 84 ICREEGVERFIHLSYLNAEEHPKPLVLKKPSAWKISKYLGECAVREEYPTATIIRASDI- 260
ICR ++RF+ L+Y EE P ++ S+W++ + E V EE+P I A I
Sbjct: 1564 ICR--AIQRFL-LAY--KEERRGPTLIAVQSSWELKRLASEIPVLEEFPLVPICVADKIN 1618
Query: 261 YGSEDRFLRSLVNKMRSHSNL 323
YG D +R + NL
Sbjct: 1619 YGVLDWQRHGARRMIRHYLNL 1639
>BC087613-1|AAH87613.1| 797|Homo sapiens POLE protein protein.
Length = 797
Score = 34.3 bits (75), Expect = 0.40
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = +3
Query: 84 ICREEGVERFIHLSYLNAEEHPKPLVLKKPSAWKISKYLGECAVREEYPTATIIRASDI- 260
ICR ++RF+ L+Y EE P ++ S+W++ + E V EE+P I A I
Sbjct: 75 ICR--AIQRFL-LAY--KEERRGPTLIAVQSSWELKRLASEIPVLEEFPLVPICVADKIN 129
Query: 261 YGSEDRFLRSLVNKMRSHSNL 323
YG D +R + NL
Sbjct: 130 YGVLDWQRHGARRMIRHYLNL 150
>BC007599-1|AAH07599.1| 797|Homo sapiens Unknown (protein for
IMAGE:3347229) protein.
Length = 797
Score = 34.3 bits (75), Expect = 0.40
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = +3
Query: 84 ICREEGVERFIHLSYLNAEEHPKPLVLKKPSAWKISKYLGECAVREEYPTATIIRASDI- 260
ICR ++RF+ L+Y EE P ++ S+W++ + E V EE+P I A I
Sbjct: 75 ICR--AIQRFL-LAY--KEERRGPTLIAVQSSWELKRLASEIPVLEEFPLVPICVADKIN 129
Query: 261 YGSEDRFLRSLVNKMRSHSNL 323
YG D +R + NL
Sbjct: 130 YGVLDWQRHGARRMIRHYLNL 150
>AY273166-1|AAP12650.1| 2265|Homo sapiens polymerase (DNA directed),
epsilon protein.
Length = 2265
Score = 34.3 bits (75), Expect = 0.40
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = +3
Query: 84 ICREEGVERFIHLSYLNAEEHPKPLVLKKPSAWKISKYLGECAVREEYPTATIIRASDI- 260
ICR ++RF+ L+Y EE P ++ S+W++ + E V EE+P I A I
Sbjct: 1543 ICR--AIQRFL-LAY--KEERRGPTLIAVQSSWELKRLASEIPVLEEFPLVPICVADKIN 1597
Query: 261 YGSEDRFLRSLVNKMRSHSNL 323
YG D +R + NL
Sbjct: 1598 YGVLDWQRHGARRMIRHYLNL 1618
>AF127975-3|AAD44692.1| 2243|Homo sapiens DNA polymerase epsilon
catalytic subunit protein isoform c protein.
Length = 2243
Score = 34.3 bits (75), Expect = 0.40
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = +3
Query: 84 ICREEGVERFIHLSYLNAEEHPKPLVLKKPSAWKISKYLGECAVREEYPTATIIRASDI- 260
ICR ++RF+ L+Y EE P ++ S+W++ + E V EE+P I A I
Sbjct: 1521 ICR--AIQRFL-LAY--KEERRGPTLIAVQSSWELKRLASEIPVLEEFPLVPICVADKIN 1575
Query: 261 YGSEDRFLRSLVNKMRSHSNL 323
YG D +R + NL
Sbjct: 1576 YGVLDWQRHGARRMIRHYLNL 1596
>AF127975-2|AAD44691.1| 2286|Homo sapiens DNA polymerase epsilon
catalytic subunit protein isoform b protein.
Length = 2286
Score = 34.3 bits (75), Expect = 0.40
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = +3
Query: 84 ICREEGVERFIHLSYLNAEEHPKPLVLKKPSAWKISKYLGECAVREEYPTATIIRASDI- 260
ICR ++RF+ L+Y EE P ++ S+W++ + E V EE+P I A I
Sbjct: 1564 ICR--AIQRFL-LAY--KEERRGPTLIAVQSSWELKRLASEIPVLEEFPLVPICVADKIN 1618
Query: 261 YGSEDRFLRSLVNKMRSHSNL 323
YG D +R + NL
Sbjct: 1619 YGVLDWQRHGARRMIRHYLNL 1639
>AF127975-1|AAD44690.1| 2297|Homo sapiens DNA polymerase epsilon
catalytic subunit protein isoform a protein.
Length = 2297
Score = 34.3 bits (75), Expect = 0.40
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = +3
Query: 84 ICREEGVERFIHLSYLNAEEHPKPLVLKKPSAWKISKYLGECAVREEYPTATIIRASDI- 260
ICR ++RF+ L+Y EE P ++ S+W++ + E V EE+P I A I
Sbjct: 1575 ICR--AIQRFL-LAY--KEERRGPTLIAVQSSWELKRLASEIPVLEEFPLVPICVADKIN 1629
Query: 261 YGSEDRFLRSLVNKMRSHSNL 323
YG D +R + NL
Sbjct: 1630 YGVLDWQRHGARRMIRHYLNL 1650
>BC060860-1|AAH60860.2| 518|Homo sapiens family with sequence
similarity 98, member A protein.
Length = 518
Score = 31.5 bits (68), Expect = 2.8
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = +2
Query: 125 LFKC*RTSETSCPEETVCLENKQVFGRVCSQRGIPN 232
L K RTS S E+T C NK + GRV + G PN
Sbjct: 275 LSKILRTSSGSIREKTACAINKVLMGRVPDRGGRPN 310
>AK074867-1|BAC11255.1| 519|Homo sapiens protein ( Homo sapiens
cDNA FLJ90386 fis, clone NT2RP2005378, weakly similar to
GLYCINE-RICH CELL WALL STRUCTURAL PROTEIN 1.8 PRECURSOR.
).
Length = 519
Score = 31.5 bits (68), Expect = 2.8
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = +2
Query: 125 LFKC*RTSETSCPEETVCLENKQVFGRVCSQRGIPN 232
L K RTS S E+T C NK + GRV + G PN
Sbjct: 276 LSKILRTSSGSIREKTACAINKVLMGRVPDRGGRPN 311
>L04288-1|AAA35734.2| 1462|Homo sapiens cyclophilin-related protein
protein.
Length = 1462
Score = 31.1 bits (67), Expect = 3.7
Identities = 17/55 (30%), Positives = 32/55 (58%)
Frame = +3
Query: 135 AEEHPKPLVLKKPSAWKISKYLGECAVREEYPTATIIRASDIYGSEDRFLRSLVN 299
A EHP+ V+K+ S+ SK LGE +++ +A++ A + G ++ +S +N
Sbjct: 1167 ATEHPQAEVVKQESSMSESKVLGEVG-KQDSSSASLASAGESTGKKEVAEKSQIN 1220
>BX957215-1|CAF29506.1| 1162|Homo sapiens hypothetical protein
protein.
Length = 1162
Score = 31.1 bits (67), Expect = 3.7
Identities = 17/55 (30%), Positives = 32/55 (58%)
Frame = +3
Query: 135 AEEHPKPLVLKKPSAWKISKYLGECAVREEYPTATIIRASDIYGSEDRFLRSLVN 299
A EHP+ V+K+ S+ SK LGE +++ +A++ A + G ++ +S +N
Sbjct: 867 ATEHPQAEVVKQESSMSESKVLGEVG-KQDSSSASLASAGESTGKKEVAEKSQIN 920
>AF184110-1|AAD56402.1| 1462|Homo sapiens cyclophilin-related protein
protein.
Length = 1462
Score = 31.1 bits (67), Expect = 3.7
Identities = 17/55 (30%), Positives = 32/55 (58%)
Frame = +3
Query: 135 AEEHPKPLVLKKPSAWKISKYLGECAVREEYPTATIIRASDIYGSEDRFLRSLVN 299
A EHP+ V+K+ S+ SK LGE +++ +A++ A + G ++ +S +N
Sbjct: 1167 ATEHPQAEVVKQESSMSESKVLGEVG-KQDSSSASLASAGESTGKKEVAEKSQIN 1220
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,030,700
Number of Sequences: 237096
Number of extensions: 2003994
Number of successful extensions: 7683
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 7506
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7671
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7591280850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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