Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0192
         (517 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       23   2.1  
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    21   4.9  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   4.9  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   4.9  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   4.9  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    21   6.5  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    21   6.5  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   8.6  

>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 13/48 (27%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
 Frame = -1

Query: 403 ESSPAA-IFR-LAKLRRSYCNERFSGQLHSVNFVSRCARIVKFHSHQF 266
           ES+P+  + R L ++ R+YC E  +  ++ ++ +  C   V   S  F
Sbjct: 293 ESNPSERVMRELGRIFRAYCRENHASWVNHLSNIEDCLNYVPHISTGF 340


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = +1

Query: 145 VYGLTCSPRPDSIHVPPFYILA*WRLPNIFEVI 243
           V+G T   RP  ++  P+     W LP   ++I
Sbjct: 76  VHGTTVRVRPPKVYPTPYGGRLVWTLPGKTKMI 108


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = +1

Query: 145 VYGLTCSPRPDSIHVPPFYILA*WRLPNIFEVI 243
           V+G T   RP  ++  P+     W LP   ++I
Sbjct: 390 VHGTTVRVRPPKVYPTPYGGRLVWTLPGKTKMI 422


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = +1

Query: 145 VYGLTCSPRPDSIHVPPFYILA*WRLPNIFEVI 243
           V+G T   RP  ++  P+     W LP   ++I
Sbjct: 623 VHGTTVRVRPPKVYPTPYGGRLVWTLPGKTKMI 655


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = +1

Query: 145 VYGLTCSPRPDSIHVPPFYILA*WRLPNIFEVI 243
           V+G T   RP  ++  P+     W LP   ++I
Sbjct: 623 VHGTTVRVRPPKVYPTPYGGRLVWTLPGKTKMI 655


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -2

Query: 108 GRASDPVVDSAKHCSC 61
           GR   P V++ KH SC
Sbjct: 342 GRKVSPRVNTIKHTSC 357


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -2

Query: 108 GRASDPVVDSAKHCSC 61
           GR   P V++ KH SC
Sbjct: 342 GRKVSPRVNTIKHTSC 357


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -1

Query: 361 RSYCNERFSGQLHSVN 314
           RSYC +   GQL+ +N
Sbjct: 335 RSYCIQPPCGQLNPIN 350


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,926
Number of Sequences: 336
Number of extensions: 2443
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)