Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0192
         (517 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF101305-2|AAF98594.2|  259|Caenorhabditis elegans Uncoordinated...    29   2.0  
Z81570-6|CAB04607.2|  725|Caenorhabditis elegans Hypothetical pr...    27   6.0  
AY887911-1|AAX34423.1|  737|Caenorhabditis elegans anion transpo...    27   6.0  

>AF101305-2|AAF98594.2|  259|Caenorhabditis elegans Uncoordinated
           protein 46 protein.
          Length = 259

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = -1

Query: 430 KFGNSRYGSESSPAAIFRLAKLRRSY-CNERFSGQLHSVNF 311
           KF  S    ES  +++   A L + Y C +R +  LHSVNF
Sbjct: 134 KFAGSSAVFESDNSSVIFSAPLTQKYVCEDRINVTLHSVNF 174


>Z81570-6|CAB04607.2|  725|Caenorhabditis elegans Hypothetical
           protein K12G11.2 protein.
          Length = 725

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = +2

Query: 158 LARQDPILSTYHLFIYWRDGVYPIFLKLYFFXARYEKL 271
           L+RQDPI+  Y         +YP+FL ++F  +++  L
Sbjct: 113 LSRQDPIVGLY-------TSIYPVFLYIFFGTSKHASL 143


>AY887911-1|AAX34423.1|  737|Caenorhabditis elegans anion
           transporter SULP-5 protein.
          Length = 737

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = +2

Query: 158 LARQDPILSTYHLFIYWRDGVYPIFLKLYFFXARYEKL 271
           L+RQDPI+  Y         +YP+FL ++F  +++  L
Sbjct: 125 LSRQDPIVGLY-------TSIYPVFLYIFFGTSKHASL 155


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,315,672
Number of Sequences: 27780
Number of extensions: 225979
Number of successful extensions: 521
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 461
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 521
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)