Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0190
(688 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_06_0284 + 21909758-21913645 33 0.28
01_06_0115 + 26585481-26586401,26586501-26586556,26586747-265868... 32 0.37
04_03_0786 - 19621674-19621960,19623152-19623193,19623679-19624339 31 0.65
03_05_0211 - 22020515-22020687,22020801-22020831,22022060-220221... 31 1.1
06_01_0996 + 7746358-7746493,7747102-7747262,7747586-7747647,774... 29 3.5
02_02_0346 - 9214365-9214583,9214830-9214919,9215012-9215177,921... 29 4.6
10_07_0044 + 12319382-12319532,12319978-12320163,12320247-123203... 28 6.0
03_05_0618 + 26177743-26178420,26179477-26179617 28 6.0
01_01_0284 - 2357085-2357244,2357354-2357730,2359114-2359371 28 6.0
11_06_0289 - 21969248-21973516 28 8.0
10_08_0959 - 21813756-21814097,21814462-21814570,21814688-218147... 28 8.0
07_03_0167 - 14649782-14649864,14649954-14650078,14650357-146504... 28 8.0
06_01_0983 - 7630651-7630683,7630717-7630942,7630993-7631234,763... 28 8.0
06_01_0878 + 6735266-6735340,6735946-6736041,6738610-6738720,673... 28 8.0
05_03_0373 - 13194723-13195847,13196219-13196809 28 8.0
03_05_0977 + 29355824-29357056 28 8.0
03_02_0721 - 10677286-10678018,10679293-10679373,10682516-106826... 28 8.0
02_04_0268 + 21435231-21435240,21435330-21435558,21435778-214358... 28 8.0
>11_06_0284 + 21909758-21913645
Length = 1295
Score = 32.7 bits (71), Expect = 0.28
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +3
Query: 318 DCDYEEKDYDEWDNESGQEQQENNSDSSDEPI 413
D DY++ DYD+ + E + +++ D D+PI
Sbjct: 520 DDDYDDDDYDDNEEEKKYDDDDDDDDDDDDPI 551
>01_06_0115 +
26585481-26586401,26586501-26586556,26586747-26586876,
26587396-26587506,26587606-26587674,26588125-26588198,
26588446-26588581,26588702-26588795,26588901-26589000,
26589100-26589224,26589597-26589634,26589662-26589742,
26589868-26589972,26590102-26590166,26590371-26590572,
26591073-26591159,26591238-26591294,26591369-26591458,
26591572-26591658,26592204-26592278,26592363-26592463,
26592565-26592655
Length = 964
Score = 32.3 bits (70), Expect = 0.37
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = +3
Query: 240 KPYKYESQMAFMKAFYKDVAIPLDSGDCDYEEKDYDEWDNESGQEQQENNSDSSD 404
+PY Y + MK Y D D D D ++ D D+ D E+ +E++E + +
Sbjct: 192 EPYSYYHRKGLMKRQYDD-----DDDDDDDDDDDDDDEDEEAEEEEEEEEEEEEE 241
>04_03_0786 - 19621674-19621960,19623152-19623193,19623679-19624339
Length = 329
Score = 31.5 bits (68), Expect = 0.65
Identities = 14/47 (29%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = +3
Query: 138 LKRPAVDCKIRWINIRDVHRRL--WKKRLSDPNRSSKPYKYESQMAF 272
L+R V C+ RW N+ ++++ W++ LS P+ SS +++F
Sbjct: 66 LERGPVQCRKRWSNLAGDYKKIREWERSLSSPSSSSAAAGMGKEVSF 112
>03_05_0211 -
22020515-22020687,22020801-22020831,22022060-22022169,
22022715-22023102,22023344-22023397,22023739-22023849,
22023956-22024015,22024618-22024694,22026155-22026188,
22026267-22027235
Length = 668
Score = 30.7 bits (66), Expect = 1.1
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Frame = +3
Query: 177 NIRDVHRRLWKKRLSDPNRSSKPYKYESQMAFMKAFYKDVAIPL--DSGDCDYEEKDYDE 350
NIR +KR S P SSK + + + K K + D D D + D +E
Sbjct: 414 NIRKGSNSRKRKRGSTPKSSSKKFDDDDDITPSKKRNKALEYDTDEDEDDADPMKSDSEE 473
Query: 351 WDNESGQEQ-QENNSDSSD 404
D +S +E+ ++N+SD+ D
Sbjct: 474 DDYDSEKEKAKKNSSDAKD 492
>06_01_0996 +
7746358-7746493,7747102-7747262,7747586-7747647,
7748142-7748595,7748994-7749134,7749444-7749633,
7749842-7750530,7750605-7750804,7751210-7751375,
7751850-7752046,7752162-7752396
Length = 876
Score = 29.1 bits (62), Expect = 3.5
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = +3
Query: 309 DSGDCDYEEKDYDEWDNESGQEQQENNSDSSDE 407
+ GD D +E + +E DN+ G+E + + +D+
Sbjct: 408 EDGDSDDDEDEGEEDDNDEGEEDDDEDRSENDD 440
>02_02_0346 -
9214365-9214583,9214830-9214919,9215012-9215177,
9215601-9215911,9215944-9216566,9216779-9216968,
9217096-9217197,9217285-9217425,9217815-9218411,
9219126-9219286,9220709-9220824,9221538-9221654,
9221746-9221808,9221879-9221949
Length = 988
Score = 28.7 bits (61), Expect = 4.6
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = +3
Query: 309 DSGDCDYEEKDYDEWDNESGQEQQENNSDSSDE 407
+ GD D +E + DE D++ G+E + + +D+
Sbjct: 547 EDGDSDDDEDEGDEDDDDEGEEDDDEDRSENDD 579
>10_07_0044 +
12319382-12319532,12319978-12320163,12320247-12320396,
12320495-12320644,12320728-12321417,12321641-12322033,
12322073-12322546,12322634-12323974,12324042-12324388
Length = 1293
Score = 28.3 bits (60), Expect = 6.0
Identities = 17/51 (33%), Positives = 22/51 (43%)
Frame = +1
Query: 331 KRKTMMNGTTNQGRSNKRTIVIPPMNQSRKLRGGVNQKESRKSHLTRRNLR 483
++K MN R N + I MN R+ R R +HL RRN R
Sbjct: 331 EQKQEMNARLRVARQNLPDVDIHEMNARRRSRRQNVTPGERTAHLARRNAR 381
>03_05_0618 + 26177743-26178420,26179477-26179617
Length = 272
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 315 GDCDYEEKDYDEWDNESGQEQQENNSDSS 401
GD D EE+ +E D E G+E+ E+ D +
Sbjct: 206 GDEDDEEEGDEEEDEEEGEEEAEDEEDEA 234
>01_01_0284 - 2357085-2357244,2357354-2357730,2359114-2359371
Length = 264
Score = 28.3 bits (60), Expect = 6.0
Identities = 29/117 (24%), Positives = 53/117 (45%), Gaps = 6/117 (5%)
Frame = +3
Query: 81 PKYMDFNAREVTWQKIGDELKRPAVDCKIRWINIRDVHRRLWKKRLSDPNRSSKPYKYES 260
P+ M F++ T EL R +D +I++ D H R+ + + P + S + S
Sbjct: 48 PRSMPFSSAPSTRPSSDGELLR-IIDAEIKFAEESDDHDRVEEIPDNFPFKISDEKGFNS 106
Query: 261 QMAFMKAFYKD-----VAIP-LDSGDCDYEEKDYDEWDNESGQEQQENNSDSSDEPI 413
+ + + + V++P L +GD E + DE NE QE++ + S P+
Sbjct: 107 -ITLTRTYQGENIEVLVSMPSLVTGDEPDRENEADEDRNEDDQEEETQKAPKSSIPL 162
>11_06_0289 - 21969248-21973516
Length = 1422
Score = 27.9 bits (59), Expect = 8.0
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +3
Query: 318 DCDYEEKDYDEWDNESGQEQQENNSDSSDEPI 413
D D +E D+ D+E +E++E++ D +EPI
Sbjct: 515 DADNDEDSNDDDDDE--EEEEEDDDDDEEEPI 544
>10_08_0959 - 21813756-21814097,21814462-21814570,21814688-21814740,
21814849-21815049,21815320-21815433,21815513-21815671,
21816490-21816849,21816928-21817149,21817967-21818093,
21818887-21819023,21819169-21819292,21819665-21820174,
21820255-21820436,21820812-21820862,21821114-21821266,
21821339-21821437,21821519-21821861,21821957-21822030,
21822105-21823025,21823133-21823257,21823419-21823461,
21823574-21823762,21824814-21825074,21825228-21825387,
21826200-21826363,21826523-21827009,21827090-21827431,
21827519-21827836,21828001-21828041,21828136-21828388,
21829158-21829261,21830198-21830386,21830543-21831196,
21831320-21831610,21831739-21831882,21832107-21832205,
21832549-21832657,21832739-21832923,21833008-21833121,
21833270-21833401,21833483-21833815,21833945-21834436,
21834773-21834847,21834917-21835066,21835143-21835241,
21835463-21835547,21837188-21837375,21837513-21837647,
21837729-21837849,21838127-21838194,21838275-21838370,
21838450-21838554,21838665-21838980,21839053-21839142,
21840011-21840181,21840850-21841010,21841088-21841270,
21841839-21841940,21842515-21842632,21842704-21842798,
21842972-21843022,21843107-21843241,21843333-21843436,
21844249-21844414,21844649-21844773,21845220-21845316
Length = 4181
Score = 27.9 bits (59), Expect = 8.0
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +3
Query: 24 DVTLISLVKQNPVLYDYNNPKYMDFNAREV 113
D+T S VK V+YD +P+Y + + R V
Sbjct: 1149 DITFESFVKAQIVIYDQQSPQYNNLDNRVV 1178
>07_03_0167 -
14649782-14649864,14649954-14650078,14650357-14650400,
14650873-14651003,14652469-14652559,14653335-14653445,
14653623-14653774,14653863-14654067,14654436-14654764,
14654850-14655309
Length = 576
Score = 27.9 bits (59), Expect = 8.0
Identities = 20/50 (40%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = +1
Query: 346 MNGTTNQGRSNKRTIVIPPMN-QSRKLRGGVNQKESRKSHLTRRNLRPPT 492
MN R N + I MN R R V E R +HLTRRN R T
Sbjct: 1 MNARRRVARQNLLDVKIHDMNAHCRSRRQNVTPGE-RSTHLTRRNARYAT 49
>06_01_0983 -
7630651-7630683,7630717-7630942,7630993-7631234,
7631502-7631591,7631680-7631845,7632225-7633191,
7633402-7633591,7633908-7634048,7634416-7634736
Length = 791
Score = 27.9 bits (59), Expect = 8.0
Identities = 12/34 (35%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +3
Query: 309 DSGDCDYEEKDYDEWDNESGQE-QQENNSDSSDE 407
+ GD D +E + +E D++ G+E E+ S++ DE
Sbjct: 245 EDGDSDDDEDEGEEDDDDEGEEDDDEDRSENDDE 278
>06_01_0878 +
6735266-6735340,6735946-6736041,6738610-6738720,
6738816-6739309,6739422-6739587,6739666-6739789,
6739874-6739986,6740085-6740693,6743095-6743385,
6743845-6743913,6744099-6744188,6744281-6744696,
6744882-6744969
Length = 913
Score = 27.9 bits (59), Expect = 8.0
Identities = 14/29 (48%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +3
Query: 324 DYEEKDYDEWDNESGQEQQ-ENNSDSSDE 407
D E+ D+D +S +EQ E+NSD SDE
Sbjct: 484 DSEDGDFDPAGPDSDKEQNDESNSDQSDE 512
>05_03_0373 - 13194723-13195847,13196219-13196809
Length = 571
Score = 27.9 bits (59), Expect = 8.0
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +3
Query: 78 NPKYMDFNAREVTWQKIGDELKRPAVDCKIRWINIRDVHRRL 203
NPK++DF W +ELK + + + IN RD L
Sbjct: 241 NPKFVDFFCENFDWAVFENELKWYSTEPQRGQINYRDADELL 282
>03_05_0977 + 29355824-29357056
Length = 410
Score = 27.9 bits (59), Expect = 8.0
Identities = 19/72 (26%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Frame = +3
Query: 204 WKKRLSDPNRSSKPYKYESQ-MAFMKAFYKDVAIPLDSGDCDYEEKDYDEWDNESGQEQQ 380
++K+ N + +K + Q ++ KD+ L++ +E+ DE + E QE +
Sbjct: 41 YEKKAYHENEPNDLHKDDDQNQGEIRLGRKDLPTKLEADSSTLDERIEDEENEEMEQEMK 100
Query: 381 --ENNSDSSDEP 410
EN+ D DEP
Sbjct: 101 HDENDEDPIDEP 112
>03_02_0721 -
10677286-10678018,10679293-10679373,10682516-10682645,
10682969-10683101
Length = 358
Score = 27.9 bits (59), Expect = 8.0
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = +1
Query: 385 TIVIPPMNQSRKLRGGVNQKESRKSHLTRRNLRPP--TSAILAPLQNSTP 528
TI + + + K RGG +SRK R PP T+A PL S+P
Sbjct: 159 TIDVTKLQAAGKRRGGRTAGQSRKGDKKRAEDDPPKETAAADTPLPESSP 208
>02_04_0268 +
21435231-21435240,21435330-21435558,21435778-21435898,
21435992-21436264
Length = 210
Score = 27.9 bits (59), Expect = 8.0
Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +1
Query: 286 IKTLPSPWTVVTAITKRKT-MMNGTTNQGRSNKR 384
I LP+ + VVT I K++T + NG++ +SN +
Sbjct: 87 INGLPTVYEVVTGIAKKQTKVSNGSSKSNKSNPK 120
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,146,544
Number of Sequences: 37544
Number of extensions: 299811
Number of successful extensions: 1061
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1011
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1058
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1744894544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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