Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0190
(688 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_36653| Best HMM Match : ACBP (HMM E-Value=3.6) 33 0.16
SB_21719| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.16
SB_25596| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.22
SB_15897| Best HMM Match : DUF134 (HMM E-Value=7.5) 33 0.22
SB_8672| Best HMM Match : PKD_channel (HMM E-Value=1.4e-38) 33 0.29
SB_21967| Best HMM Match : BAG (HMM E-Value=1.7e-18) 32 0.50
SB_34257| Best HMM Match : DUF1172 (HMM E-Value=1.3) 31 0.66
SB_52001| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.87
SB_31911| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.87
SB_3878| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.87
SB_34910| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.87
SB_21591| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.87
SB_59548| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_56851| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_44902| Best HMM Match : EGF (HMM E-Value=9.6e-06) 30 1.5
SB_1693| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_52916| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_29898| Best HMM Match : Chromadorea_ALT (HMM E-Value=0.0085) 30 1.5
SB_27218| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.42) 30 1.5
SB_26379| Best HMM Match : HALZ (HMM E-Value=1.4) 30 1.5
SB_25550| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_20735| Best HMM Match : HALZ (HMM E-Value=4.6) 30 1.5
SB_37031| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_16305| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_48579| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_43512| Best HMM Match : RNA_pol_delta (HMM E-Value=4.7) 29 2.7
SB_27856| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_50158| Best HMM Match : Toxin_16 (HMM E-Value=2) 29 3.5
SB_38913| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_7016| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_646| Best HMM Match : MGAT2 (HMM E-Value=2.1) 29 3.5
SB_44749| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_59429| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_6496| Best HMM Match : Collagen (HMM E-Value=0) 29 4.7
SB_19112| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_48789| Best HMM Match : M (HMM E-Value=1.3e-10) 28 6.2
SB_46036| Best HMM Match : PSRT (HMM E-Value=1) 28 6.2
SB_37978| Best HMM Match : zf-C2H2 (HMM E-Value=0) 28 6.2
SB_32607| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_38787| Best HMM Match : Nop17p (HMM E-Value=0.34) 28 8.1
SB_29350| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_46960| Best HMM Match : Neuromodulin (HMM E-Value=3.6) 28 8.1
SB_20965| Best HMM Match : Fz (HMM E-Value=3.1) 28 8.1
SB_4274| Best HMM Match : LRV (HMM E-Value=5.7) 28 8.1
>SB_36653| Best HMM Match : ACBP (HMM E-Value=3.6)
Length = 206
Score = 33.5 bits (73), Expect = 0.16
Identities = 14/52 (26%), Positives = 29/52 (55%)
Frame = +3
Query: 33 LISLVKQNPVLYDYNNPKYMDFNAREVTWQKIGDELKRPAVDCKIRWINIRD 188
L V+ PVLYD + + D N +E W+++ ++ + K +++N+R+
Sbjct: 21 LAEAVRAFPVLYDKSIKDFKDKNKKENAWKQVAEQAGCSVDEAKRKFLNLRN 72
>SB_21719| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 424
Score = 33.5 bits (73), Expect = 0.16
Identities = 20/79 (25%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Frame = +1
Query: 298 PSPWTVVTAITKRKTMMNGTTNQGRSNKRTIVIPPMNQSRKLRGGVNQKESRKSHLTRRN 477
P+P K+ NG N+ S K+ + + S ++ Q + LT
Sbjct: 42 PAPTAASAPEEKKNKKKNGEKNKEPSQKQALAEGAKDASLEIYSSFRQVFGAQLDLTSET 101
Query: 478 LRPP-TSAILAPLQNSTPL 531
+PP TS + P+Q +TP+
Sbjct: 102 RQPPETSTPVTPIQETTPI 120
>SB_25596| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 89
Score = 33.1 bits (72), Expect = 0.22
Identities = 15/66 (22%), Positives = 37/66 (56%)
Frame = +3
Query: 45 VKQNPVLYDYNNPKYMDFNAREVTWQKIGDELKRPAVDCKIRWINIRDVHRRLWKKRLSD 224
V+ PVLYD + + D N +E W+++ ++ + K +++N+R+ + + K ++
Sbjct: 25 VRAFPVLYDKSIKDFKDKNKKENAWKQVAEQAGCSVDEAKRKFLNLRNRYSK-DKNKIKS 83
Query: 225 PNRSSK 242
++S +
Sbjct: 84 KSKSGE 89
>SB_15897| Best HMM Match : DUF134 (HMM E-Value=7.5)
Length = 311
Score = 33.1 bits (72), Expect = 0.22
Identities = 18/74 (24%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = +3
Query: 33 LISLVKQNPVLYDYNNPKYMDFNAREVTWQKIGDELKRPAVDCKIRWINIRDVH-RRLWK 209
LI+L +++ LYD + Y + R + ++ I ++L + K + N+R + + +WK
Sbjct: 28 LITLWREHEELYDLRHVDYPKRDRRRLAFKHISEQLGITVPEIKKKMTNLRTYYTKEIWK 87
Query: 210 KRLSDPNRSSKPYK 251
+R + +P K
Sbjct: 88 ERPGGKMGTDEPSK 101
>SB_8672| Best HMM Match : PKD_channel (HMM E-Value=1.4e-38)
Length = 1523
Score = 32.7 bits (71), Expect = 0.29
Identities = 17/69 (24%), Positives = 31/69 (44%)
Frame = +3
Query: 198 RLWKKRLSDPNRSSKPYKYESQMAFMKAFYKDVAIPLDSGDCDYEEKDYDEWDNESGQEQ 377
R +K R K E ++ KDV++ +D D + E D ++D+E+ +
Sbjct: 1236 RKLQKEAEKETRDIFKNKAEDSGGIGESINKDVSVDIDGKDENNEHDDDHDFDDENDDDY 1295
Query: 378 QENNSDSSD 404
+N+ D D
Sbjct: 1296 DDNDDDDGD 1304
>SB_21967| Best HMM Match : BAG (HMM E-Value=1.7e-18)
Length = 336
Score = 31.9 bits (69), Expect = 0.50
Identities = 22/89 (24%), Positives = 43/89 (48%), Gaps = 1/89 (1%)
Frame = +3
Query: 141 KRPAVDCKIRWINIRDVHRRLWKKRLSDPNRSSKPYKYESQMAFMKAFYKDVAIPLDSGD 320
K+ KI + RD + + D ++ SK + +++ + ++ AI ++ D
Sbjct: 115 KKDVKQIKIIREDSRDTNEEMAVPDFKDCSKESKQ-ETNTEIPLSEIQNEEGAITSENAD 173
Query: 321 CDYEEKDYDEWDNESGQEQQ-ENNSDSSD 404
+ E + DE DN GQ+ + + S+SSD
Sbjct: 174 SEIEYESADEGDNSDGQQMEVDGESNSSD 202
>SB_34257| Best HMM Match : DUF1172 (HMM E-Value=1.3)
Length = 304
Score = 31.5 bits (68), Expect = 0.66
Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = +1
Query: 331 KRKTMMNGTTNQGRSNKRTIVIPPMNQSRKLRGGVNQKESRKSHLTRRNLRPP-TSAILA 507
K+ NG N+ S K+ + + S ++ Q + LT +PP TS +
Sbjct: 4 KKNKKKNGEKNKEPSQKQALAEGAKDASLEIYSSFRQVFGAQLDLTSETRQPPETSTSVT 63
Query: 508 PLQNSTPL 531
P+Q +TP+
Sbjct: 64 PIQETTPI 71
>SB_52001| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 137
Score = 31.1 bits (67), Expect = 0.87
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +3
Query: 288 KDVAIPLDSGDCDYEEKDYDEWDNESGQEQQENNSDSSDE 407
KDV D DCD K + D++ G + NN D D+
Sbjct: 13 KDVGDGDDDDDCDVYYKGDGDADDDDGDDDGNNNDDDDDD 52
>SB_31911| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1312
Score = 31.1 bits (67), Expect = 0.87
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +3
Query: 249 KYESQMAFMKAFYKDVAIPLDSGDCDYEEKDYDEWDNESGQEQQEN 386
K+ES++ M+ +Y+ V S D D D+WD + E +N
Sbjct: 1077 KFESRLEMMREYYQQVETECQSTDEDPFFDPEDKWDKDFKMESPQN 1122
>SB_3878| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 243
Score = 31.1 bits (67), Expect = 0.87
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +3
Query: 309 DSGDCDYEEKDYDEWDNESGQEQQENNSDSSD 404
+ D + EE+D E DN+ G+E++E D+ D
Sbjct: 212 EDDDDEVEERDETENDNDEGEEREEMEDDNDD 243
>SB_34910| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2147
Score = 31.1 bits (67), Expect = 0.87
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Frame = +1
Query: 316 VTAITK--RKTMMNGTTNQGRSNKRTIVIPPMNQSRKLRGGVNQKESRKSHLTRRNLRPP 489
VT++T+ R + + T + RS + T V +S + +ESR S +T PP
Sbjct: 844 VTSVTQESRSSQVTSATQESRSTQVTSVT---QESHSTQVTSATQESRSSQVTSVTQEPP 900
Query: 490 TSAILAPLQNSTPLTRLTHSS 552
+S + + Q S P T++T ++
Sbjct: 901 SSQVTSVTQES-PSTQVTSAT 920
Score = 30.7 bits (66), Expect = 1.2
Identities = 23/89 (25%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Frame = +1
Query: 292 TLPSPWTVVTAITKR--KTMMNGTTNQGRSNKRTIVIPPMNQSRKLRGGVNQKESRKSHL 465
T S ++ VT++T+ + + T + RS++ T V +SR + +ESR S +
Sbjct: 1328 TQESRYSQVTSVTQEPPSSQVTSVTQESRSSQVTSVT---QESRSSQVTSVTQESRSSQV 1384
Query: 466 TRRNLRPPTSAILAPLQNSTPLTRLTHSS 552
T PP++ + + Q S P +++T ++
Sbjct: 1385 TSATQEPPSTQVTSVTQES-PSSQVTSAT 1412
Score = 30.3 bits (65), Expect = 1.5
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Frame = +1
Query: 316 VTAITKRK--TMMNGTTNQGRSNKRTIVIPPMNQSRKLRGGVNQKESRKSHLTRRNLRPP 489
VT++T+ T + T + RS++ T V +SR + +ESR S +T PP
Sbjct: 1180 VTSVTQESSSTQVTSATQESRSSQVTSVT---QESRSSQVTSVTQESRSSQVTSATQEPP 1236
Query: 490 TSAILAPLQNSTPLTRLTHSS 552
++ + Q S P T++T ++
Sbjct: 1237 STQATSVTQES-PSTQVTSAT 1256
Score = 29.9 bits (64), Expect = 2.0
Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 11/88 (12%)
Frame = +1
Query: 292 TLPSPWTVVTAITKR--KTMMNGTTNQGRSNKRTIVI--PPMNQ-------SRKLRGGVN 438
T P T VT++T+ T + T + RS++ T V PP +Q S +
Sbjct: 932 TQEPPSTQVTSVTQEPPSTQVTSATQESRSSQVTSVTQNPPSSQVTSVTQESHSTQVTSA 991
Query: 439 QKESRKSHLTRRNLRPPTSAILAPLQNS 522
+ESR S +T PP+S + + Q S
Sbjct: 992 TQESRSSQVTSVTQEPPSSQVTSVTQES 1019
Score = 28.3 bits (60), Expect = 6.2
Identities = 28/93 (30%), Positives = 41/93 (44%), Gaps = 6/93 (6%)
Frame = +1
Query: 292 TLPSPWTVVTAITKRK--TMMNGTTNQGRSNKRTIVI--PPMNQSRKLRGGVNQKESRKS 459
T SP T VT+ T+ + + T + S + T V PP Q +ESR S
Sbjct: 908 TQESPSTQVTSATQESPSSQVTSVTQEPPSTQVTSVTQEPPSTQVTSAT-----QESRSS 962
Query: 460 HLTRRNLRPPTSAILAPLQ--NSTPLTRLTHSS 552
+T PP+S + + Q +ST +T T S
Sbjct: 963 QVTSVTQNPPSSQVTSVTQESHSTQVTSATQES 995
>SB_21591| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 111
Score = 31.1 bits (67), Expect = 0.87
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +3
Query: 309 DSGDCDYEEKDYDEWDNESGQEQQENNSDSSDE 407
D D D ++ D D+ D+E +E++E N D D+
Sbjct: 47 DDDDDDDDDDDDDDDDDEEEEEEEEENDDDDDD 79
>SB_59548| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2835
Score = 30.7 bits (66), Expect = 1.2
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +3
Query: 318 DCDYEEKDYDEWDNESGQEQQENNSDSSDE 407
D D ++DYD+ DN+ + ++N D +D+
Sbjct: 64 DDDDSDEDYDDDDNDDNDDDNDDNDDDNDD 93
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Frame = +3
Query: 309 DSGDCDYEEKDYDEWD--NESGQEQQENNSDSSDE 407
D D DY++ D D+ D N+ + ++N D +D+
Sbjct: 66 DDSDEDYDDDDNDDNDDDNDDNDDDNDDNDDDNDD 100
>SB_56851| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 100
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +3
Query: 309 DSGDCDYEEKDYDEWDNESGQEQQENNSDSSDE 407
D D DY++KD D++DN+ + ++N D D+
Sbjct: 56 DDDDDDYDDKDNDDYDND--DDVDDDNDDYDDD 86
>SB_44902| Best HMM Match : EGF (HMM E-Value=9.6e-06)
Length = 335
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +3
Query: 309 DSGDCDYEEKDYDEWDNESGQEQQENNSDSSD 404
D GD + +E D D D+E E E++ DS D
Sbjct: 225 DDGDSEDDEDDGDSEDDEDDGEDDEDDGDSED 256
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +3
Query: 315 GDCDYEEKDYDEWDNESGQEQQENNSDSSDE 407
GD D EE D D D+E + +++ D D+
Sbjct: 218 GDSDDEEDDGDSEDDEDDGDSEDDEDDGEDD 248
>SB_1693| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 350
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = +1
Query: 331 KRKTMMNGTTNQGRSNKRTIVIPPMNQSRKLRGGVNQKESRKSHLTRRNLRPP-TSAILA 507
K+ NG N+ S K+ + S ++ Q + LT +PP TS +
Sbjct: 72 KKNKKKNGEKNKEPSQKQAFAEGAKDASLEIYSSFRQVFGAQLDLTSETRQPPETSTPVT 131
Query: 508 PLQNSTPL 531
P+Q +TP+
Sbjct: 132 PIQETTPI 139
>SB_52916| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 508
Score = 30.3 bits (65), Expect = 1.5
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = +3
Query: 282 FYKDVAIPLDSGDCDYEEKDYDEWDNESGQEQQENNSD 395
+Y D A + D++E+ D+WD + G ++E D
Sbjct: 390 WYTDAAFWKQQEEADFDEETVDDWDVDMGIYEEEGGGD 427
>SB_29898| Best HMM Match : Chromadorea_ALT (HMM E-Value=0.0085)
Length = 350
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 288 KDVAIPLDSGDCDYEEKDYDEWDNESGQEQQENNSDSSDE 407
KD + D G+ D E ++ E D+E G E EN ++ +E
Sbjct: 37 KDEPLQEDDGEEDEETQEEPEDDSEGGTENDENPGEAENE 76
>SB_27218| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.42)
Length = 175
Score = 30.3 bits (65), Expect = 1.5
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +3
Query: 309 DSGDCDYEEKDYDEWDNESGQEQQENNSDSSDE 407
D GD D ++ D D+ DN + N+ D++D+
Sbjct: 121 DGGDDDDDDDDNDDDDNNDDDDDDNNDDDNNDD 153
>SB_26379| Best HMM Match : HALZ (HMM E-Value=1.4)
Length = 421
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = +1
Query: 331 KRKTMMNGTTNQGRSNKRTIVIPPMNQSRKLRGGVNQKESRKSHLTRRNLRPP-TSAILA 507
K+ NG N+ S K+ + S ++ Q + LT +PP TS +
Sbjct: 72 KKNKKKNGEKNKEPSQKQAFAEGAKDASLEIYSSFRQVFGAQLDLTSETRQPPETSTPVT 131
Query: 508 PLQNSTPL 531
P+Q +TP+
Sbjct: 132 PIQETTPI 139
>SB_25550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 190
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/36 (33%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +3
Query: 285 YKDVAIP-LDSGDCDYEEKDYDEWDNESGQEQQENN 389
Y DV +D D DY++ DYD++D+ G + ++++
Sbjct: 145 YDDVDYDDVDYDDVDYDDGDYDDYDDGGGYDDKDDD 180
>SB_20735| Best HMM Match : HALZ (HMM E-Value=4.6)
Length = 259
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = +1
Query: 331 KRKTMMNGTTNQGRSNKRTIVIPPMNQSRKLRGGVNQKESRKSHLTRRNLRPP-TSAILA 507
K+ NG N+ S K+ + S ++ Q + LT +PP TS +
Sbjct: 91 KKNKKKNGEKNKEPSQKQAFAEGAKDASLEIYSSFRQVFGAQLDLTSETRQPPETSTPVT 150
Query: 508 PLQNSTPL 531
P+Q +TP+
Sbjct: 151 PIQETTPI 158
>SB_37031| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 100
Score = 29.9 bits (64), Expect = 2.0
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +3
Query: 300 IPLDSGDCDYEEKDYDEWDNESGQEQQENNSDSSDE 407
+ LD D D ++ D D+ DN+ + ++N D D+
Sbjct: 52 VVLDDDDDDDDDDDDDDDDNDDDNDDDDDNDDDDDD 87
>SB_16305| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1122
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 5/40 (12%)
Frame = +3
Query: 309 DSGDCDYEEKDYDEWDNESGQEQQEN-----NSDSSDEPI 413
D D D E+ D E D+ES ++EN NSD D+P+
Sbjct: 463 DEHDDDDEDDDDSEGDDESSNAKEENIDSDDNSDDDDKPL 502
>SB_48579| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 324
Score = 29.5 bits (63), Expect = 2.7
Identities = 10/35 (28%), Positives = 17/35 (48%)
Frame = +3
Query: 309 DSGDCDYEEKDYDEWDNESGQEQQENNSDSSDEPI 413
+ GD D DY++ D +S +NN + D +
Sbjct: 123 EDGDSDVRHDDYNDEDGDSDVRHDDNNDEDGDSDV 157
Score = 29.5 bits (63), Expect = 2.7
Identities = 10/35 (28%), Positives = 17/35 (48%)
Frame = +3
Query: 309 DSGDCDYEEKDYDEWDNESGQEQQENNSDSSDEPI 413
+ GD D +Y++ D +S +NN D D +
Sbjct: 165 EDGDSDVRHDEYNDEDGDSDVRHDDNNDDDGDSDV 199
Score = 29.5 bits (63), Expect = 2.7
Identities = 10/35 (28%), Positives = 17/35 (48%)
Frame = +3
Query: 309 DSGDCDYEEKDYDEWDNESGQEQQENNSDSSDEPI 413
+ GD D +Y++ D +S +NN D D +
Sbjct: 263 EDGDSDVRHDEYNDEDGDSDVRHDDNNDDDGDSDV 297
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/35 (31%), Positives = 16/35 (45%)
Frame = +3
Query: 309 DSGDCDYEEKDYDEWDNESGQEQQENNSDSSDEPI 413
D GD D D ++ D +S +NN D D +
Sbjct: 67 DDGDSDVRHDDNNDEDGDSDVRHDDNNDDDGDSDV 101
Score = 29.1 bits (62), Expect = 3.5
Identities = 10/35 (28%), Positives = 17/35 (48%)
Frame = +3
Query: 309 DSGDCDYEEKDYDEWDNESGQEQQENNSDSSDEPI 413
D GD D +Y++ D +S +NN + D +
Sbjct: 95 DDGDSDVRHDEYNDDDGDSDVRHDDNNDEDGDSDV 129
Score = 28.7 bits (61), Expect = 4.7
Identities = 11/35 (31%), Positives = 16/35 (45%)
Frame = +3
Query: 309 DSGDCDYEEKDYDEWDNESGQEQQENNSDSSDEPI 413
D GD D D ++ D +S +NN D D +
Sbjct: 39 DDGDSDVRHDDNNDDDGDSDVRHDDNNDDDGDSDV 73
Score = 27.9 bits (59), Expect = 8.1
Identities = 9/35 (25%), Positives = 17/35 (48%)
Frame = +3
Query: 309 DSGDCDYEEKDYDEWDNESGQEQQENNSDSSDEPI 413
+ GD D +Y++ D +S +NN + D +
Sbjct: 221 EDGDSDVRHDEYNDEDGDSDVRHDDNNDEDGDSDV 255
>SB_43512| Best HMM Match : RNA_pol_delta (HMM E-Value=4.7)
Length = 241
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 330 EEKDYDEWDNESGQEQQENNSDSSDE 407
E +D D+ D+E +E +E+ D SDE
Sbjct: 199 ESEDSDDGDDEDDEEDEEDEKDESDE 224
>SB_27856| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 277
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +3
Query: 309 DSGDCDYEEKDYDEWDNESGQEQQENNSDSSDE 407
D+G D +++DYD ++ E +N D DE
Sbjct: 229 DNGHDDDDDEDYDNGHDDDDDEDYDNGHDDEDE 261
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = +3
Query: 309 DSGDCDYEEKDYDEWDNESGQEQQENNSDSSDE 407
D+G D +++DYD ++ E +N D D+
Sbjct: 217 DNGHDDDDDEDYDNGHDDDDDEDYDNGHDDDDD 249
>SB_50158| Best HMM Match : Toxin_16 (HMM E-Value=2)
Length = 746
Score = 29.1 bits (62), Expect = 3.5
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Frame = +1
Query: 376 NKRTIVIPPMNQSRKLRGGVNQKESRKSHLTRRNLRPPTS-AILAPLQNSTPLTRLTHSS 552
N R + +NQ +K N+K+ R+ ++ N+ A L P+ + P+ R S+
Sbjct: 111 NNRNAALSRLNQLKKRFEAANRKQYREDYIQFMNIIINNGYAELVPVIETEPIARQRRST 170
Query: 553 SA*HQH*RLSHPII 594
+ H L HP I
Sbjct: 171 TWFIPHHGLYHPKI 184
>SB_38913| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 63
Score = 29.1 bits (62), Expect = 3.5
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = +3
Query: 309 DSGDCDYEEKDYDEWDNESGQEQQENNSDSSDE 407
D D D ++ D D+ D+E + +++N+D D+
Sbjct: 14 DDNDDDDDDDDNDDDDDEDDDDDEDDNNDDDDD 46
>SB_7016| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 472
Score = 29.1 bits (62), Expect = 3.5
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 9/63 (14%)
Frame = +3
Query: 192 HRRLWKKRLSDPNRSSKPY------KYESQMAF-MKAFYKDVAIPLD-SGDCDYEE-KDY 344
++ LW K SD N + KP Y S +F +A Y + +PLD + +Y E K Y
Sbjct: 103 NKSLWSKEASDVNSNEKPLIIQNGTHYGSASSFSYRAMYDVLELPLDWPAEVNYHEAKAY 162
Query: 345 DEW 353
W
Sbjct: 163 CAW 165
>SB_646| Best HMM Match : MGAT2 (HMM E-Value=2.1)
Length = 298
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/33 (33%), Positives = 22/33 (66%)
Frame = +3
Query: 309 DSGDCDYEEKDYDEWDNESGQEQQENNSDSSDE 407
D+ D D ++++YDE D+E+ EN +D+ ++
Sbjct: 206 DNDDDDDDDENYDENDDENVGNDNENENDNEND 238
>SB_44749| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2250
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/35 (31%), Positives = 16/35 (45%)
Frame = +3
Query: 309 DSGDCDYEEKDYDEWDNESGQEQQENNSDSSDEPI 413
D GD D D ++ D +S +NN D D +
Sbjct: 1802 DDGDSDVRHDDNNDEDGDSDVRHDDNNDDDGDSDV 1836
Score = 28.7 bits (61), Expect = 4.7
Identities = 11/35 (31%), Positives = 16/35 (45%)
Frame = +3
Query: 309 DSGDCDYEEKDYDEWDNESGQEQQENNSDSSDEPI 413
D GD D D ++ D +S +NN D D +
Sbjct: 1830 DDGDSDVRHDDNNDDDGDSDVRHDDNNDDDGDSDV 1864
>SB_59429| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 97
Score = 28.7 bits (61), Expect = 4.7
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = +3
Query: 309 DSGDCDYEEKDYDEWDNESGQEQQENNSDSSDE 407
D D D ++ DYD+ ++S + ++N D +D+
Sbjct: 21 DDDDDDDDDDDYDDNTDDSDDDDADHNEDDNDD 53
>SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1870
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = +3
Query: 309 DSGDCDYEEKDYDEWDNE-SGQEQQENNS-DSSD 404
D GD D +E D D W+++ SG Q N S D SD
Sbjct: 33 DDGDDDDDEDDDDGWESDSSGPAQPHNTSTDLSD 66
>SB_6496| Best HMM Match : Collagen (HMM E-Value=0)
Length = 1234
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +3
Query: 309 DSGDCDYEEKDYDEWDNESGQEQQENNSDSSDE 407
+ G+CD EE + E D+E E+ E +S+ S+E
Sbjct: 293 EEGECDSEESEEGECDSEE-SEEGECDSEESEE 324
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +3
Query: 309 DSGDCDYEEKDYDEWDNESGQEQQENNSDSSDE 407
+ G+CD EE + E D+E E+ E +S+ S+E
Sbjct: 303 EEGECDSEESEEGECDSEE-SEEGECDSEESEE 334
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +3
Query: 309 DSGDCDYEEKDYDEWDNESGQEQQENNSDSSDE 407
+ G+CD EE + E D+E E+ E +S+ S+E
Sbjct: 313 EEGECDSEESEEGECDSEE-SEEGECDSEESEE 344
Score = 27.9 bits (59), Expect = 8.1
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +3
Query: 309 DSGDCDYEEKDYDEWDNESGQEQQENNSDSSD 404
+ G+CD EE + E D+E +E + + +S +
Sbjct: 323 EEGECDSEESEEGECDSEESEEGECDTEESEE 354
>SB_19112| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 47
Score = 28.7 bits (61), Expect = 4.7
Identities = 11/34 (32%), Positives = 22/34 (64%)
Frame = +3
Query: 306 LDSGDCDYEEKDYDEWDNESGQEQQENNSDSSDE 407
+D+GD DY++ D D+ D++ + ++ D +DE
Sbjct: 13 VDNGDGDYDDDD-DDNDDDDDDDDDDDGVDGNDE 45
>SB_48789| Best HMM Match : M (HMM E-Value=1.3e-10)
Length = 2478
Score = 28.3 bits (60), Expect = 6.2
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +3
Query: 294 VAIPLDSGDCDYEEKDYDEWDNESGQEQQENNSDSSDE 407
V I D G+ D EE D +E D+E G+E E+ + +D+
Sbjct: 1788 VLIESDDGEDD-EEVD-EEMDDEEGEEMMEDEDEEADK 1823
>SB_46036| Best HMM Match : PSRT (HMM E-Value=1)
Length = 878
Score = 28.3 bits (60), Expect = 6.2
Identities = 22/74 (29%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Frame = +3
Query: 186 DVHRRLWKKRLSDPNRSSKPYKYE-SQMAFMKAFYKDVAIPLDSGDCDYEEKDYDEWDNE 362
+V RR S NRS P K S KA D+ + ++ D D D+E
Sbjct: 772 EVPRRSSHMEDSSANRSISPVKERASSKPSEKAMEAPSGKAPDTKQKERKKTDSDSDDDE 831
Query: 363 SGQEQQENNSDSSD 404
S + ++ DSSD
Sbjct: 832 SSESDSSDDEDSSD 845
>SB_37978| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 487
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +3
Query: 288 KDVAIPLDSGDCDYEEKDYDEWDNESGQEQQENNSDSSDE 407
KD D + D++E D S E+ ++SDSSDE
Sbjct: 27 KDAETQTDPEITGVDADDFEEGDYSSSGEESGSDSDSSDE 66
>SB_32607| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 131
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = +3
Query: 309 DSGDCDYEEKDYDEWDNESGQEQQENNSDSSD 404
D D + DYD DN + +NN+D D
Sbjct: 51 DENDYVGDNNDYDSGDNNDKDDGSDNNNDDDD 82
>SB_38787| Best HMM Match : Nop17p (HMM E-Value=0.34)
Length = 438
Score = 27.9 bits (59), Expect = 8.1
Identities = 15/47 (31%), Positives = 30/47 (63%), Gaps = 5/47 (10%)
Frame = +3
Query: 168 RWINIRDVHRRLW-KKRLSDPNRSS--KPY-KYES-QMAFMKAFYKD 293
RW+ + RR+W KKR + R++ +PY ++ S +A+M+ +Y++
Sbjct: 25 RWVERLNARRRIWQKKRYTKQQRTNTDEPYLRHPSYAIAWMRGYYEE 71
>SB_29350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 211
Score = 27.9 bits (59), Expect = 8.1
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +1
Query: 244 PTNMSHKWHL*RHFIKTLPSPWTVVTAITKRKTMMNGTT 360
PT +SH++H H PSP + IT T+ TT
Sbjct: 100 PTPLSHRYHHRHHHTSPSPSPPYITITITITITITTITT 138
>SB_46960| Best HMM Match : Neuromodulin (HMM E-Value=3.6)
Length = 557
Score = 27.9 bits (59), Expect = 8.1
Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = +3
Query: 288 KDVAIPLD-SGDCDYEEKDYDEWDNESGQEQQENNSDSSDE 407
KD + D + CD E+ D D+ N+ + + N D D+
Sbjct: 330 KDADMDSDHNNSCDDEDYDDDDVHNDDSENDDDENDDDDDD 370
>SB_20965| Best HMM Match : Fz (HMM E-Value=3.1)
Length = 529
Score = 27.9 bits (59), Expect = 8.1
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +3
Query: 291 DVAIPLDSGDCDYEEKDYDE 350
DV D GDCDYE+ ++D+
Sbjct: 33 DVGGDNDGGDCDYEDDNHDD 52
>SB_4274| Best HMM Match : LRV (HMM E-Value=5.7)
Length = 327
Score = 27.9 bits (59), Expect = 8.1
Identities = 19/83 (22%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Frame = +3
Query: 30 TLISLVKQNPVLYDYNNPKYMDFNAREVTWQKIGDELK--RPAVDCKIRWINIRDVHRRL 203
T I + N L+++N P+Y +++ + + ELK D +I+W ++ +R+
Sbjct: 64 TFILFYQTNESLWNHNIPEYHTNRNKDLLFNCLIKELKYRYTKQDVEIKWKSLLKFYRQE 123
Query: 204 WKKRLSDPNRSSKPYKYESQMAF 272
+K P+ Y+S F
Sbjct: 124 HEKAQHKPSGWGTDEVYQSSWEF 146
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,689,099
Number of Sequences: 59808
Number of extensions: 340411
Number of successful extensions: 1575
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 1362
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1562
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1781448916
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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