Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0189
         (371 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    21   3.1  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    21   4.1  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    21   4.1  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     21   5.4  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    21   5.4  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           21   5.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    20   7.1  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    20   7.1  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    20   7.1  

>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 3.1
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +1

Query: 292 IYAWKGETDDEYIWCIEQ 345
           ++ W  ETDD + +C E+
Sbjct: 347 VFIWSIETDDMHEFCGEK 364


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.0 bits (42), Expect = 4.1
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 362 SGKINVCSIHQIYSSSVSPF 303
           +GK  +C+IHQ  S   S F
Sbjct: 268 TGKTVICTIHQPSSEVYSMF 287


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.0 bits (42), Expect = 4.1
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 362 SGKINVCSIHQIYSSSVSPF 303
           +GK  +C+IHQ  S   S F
Sbjct: 268 TGKTVICTIHQPSSEVYSMF 287


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -2

Query: 340 QYTKYTRHQFL 308
           Q T YTRHQ L
Sbjct: 236 QRTAYTRHQIL 246


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -2

Query: 340 QYTKYTRHQFL 308
           Q T YTRHQ L
Sbjct: 236 QRTAYTRHQIL 246


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -2

Query: 340 QYTKYTRHQFL 308
           Q T YTRHQ L
Sbjct: 236 QRTAYTRHQIL 246


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 20.2 bits (40), Expect = 7.1
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = -2

Query: 274  PVQLRPRLVYYKCYCW 227
            P +L+P+  Y+K  C+
Sbjct: 1388 PEELKPQSGYFKIVCY 1403


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 20.2 bits (40), Expect = 7.1
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -1

Query: 347 VCSIHQIYSSSVSPFQA*MGI 285
           +C +HQ  S SV  F    G+
Sbjct: 226 ICYLHQHLSKSVKLFNEVFGV 246



 Score = 20.2 bits (40), Expect = 7.1
 Identities = 7/22 (31%), Positives = 11/22 (50%)
 Frame = -1

Query: 347  VCSIHQIYSSSVSPFQA*MGIP 282
            +CS+H   S  +  F    G+P
Sbjct: 1304 LCSLHHHLSKLIKSFNEIYGVP 1325


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 20.2 bits (40), Expect = 7.1
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -1

Query: 347 VCSIHQIYSSSVSPFQA*MGI 285
           +C +HQ  S SV  F    G+
Sbjct: 244 ICYLHQHLSKSVKLFNEVFGV 264


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.317    0.133    0.400 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,611
Number of Sequences: 336
Number of extensions: 2044
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7722305
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)