Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0189
(371 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_19018| Best HMM Match : No HMM Matches (HMM E-Value=.) 207 2e-54
SB_4195| Best HMM Match : No HMM Matches (HMM E-Value=.) 79 9e-16
SB_36748| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.91
SB_32965| Best HMM Match : Kazal_1 (HMM E-Value=3.4e-19) 29 0.91
SB_12514| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.2
SB_39834| Best HMM Match : Kazal_1 (HMM E-Value=0) 29 1.6
SB_21598| Best HMM Match : DUF1642 (HMM E-Value=9.6) 28 2.1
SB_55598| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.5
SB_42079| Best HMM Match : L_lactis_RepB_C (HMM E-Value=0.16) 26 8.5
SB_40582| Best HMM Match : Kazal_1 (HMM E-Value=0) 26 8.5
>SB_19018| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 434
Score = 207 bits (506), Expect = 2e-54
Identities = 93/121 (76%), Positives = 106/121 (87%)
Frame = +1
Query: 7 KPPYKIADEKLAEWGRKEIMLAEKEMPGLMACRRKYAPAKILKGARIAGSLHMTVQTAVL 186
K PYK+AD LAEWGRKEI+LAE EMPGLMA R++Y P+K LKGARIAG LHMT+QTAVL
Sbjct: 6 KLPYKVADISLAEWGRKEIVLAENEMPGLMALRKEYGPSKPLKGARIAGCLHMTIQTAVL 65
Query: 187 IETLIELGAEVQWSSSNIYSTQDEAAAALVAVGIPIYAWKGETDDEYIWCIEQTLIFPDG 366
IETL ELGAEVQWSS NI+STQD AAAA+ G+P+YAWKGETD+EYIWCIEQTL+F DG
Sbjct: 66 IETLTELGAEVQWSSCNIFSTQDHAAAAIAKTGVPVYAWKGETDEEYIWCIEQTLVFKDG 125
Query: 367 K 369
+
Sbjct: 126 Q 126
>SB_4195| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 344
Score = 79.4 bits (187), Expect = 9e-16
Identities = 31/57 (54%), Positives = 47/57 (82%)
Frame = +1
Query: 181 VLIETLIELGAEVQWSSSNIYSTQDEAAAALVAVGIPIYAWKGETDDEYIWCIEQTL 351
VLIETL+ LGA+++W + NIYSTQ+E AAA+ G+ I+AWKGE+++++ WCIE+ +
Sbjct: 125 VLIETLMALGAQIRWCACNIYSTQNEVAAAMAESGLSIFAWKGESEEDFWWCIEKCI 181
>SB_36748| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 329
Score = 29.5 bits (63), Expect = 0.91
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
Frame = +1
Query: 1 KMKPPYKIADEKLAEWGRKEIMLAEKEMPGLMACRR--KYAPAKILKGARIAGSLHMTVQ 174
KM P KIA +K+ + RK + E + CR K +ILK ++ G
Sbjct: 220 KMVPDKKIACDKIRDVIRKHLRFLETTEYEVNRCREISKLLSNRILKDLKLLGFPRYKFV 279
Query: 175 TAVLIETLIELGAEVQWSSSNIYSTQDE 258
++V I + LG V+ +S ++ T+ +
Sbjct: 280 SSVCIGQM--LGQSVRIASRCVWDTESD 305
>SB_32965| Best HMM Match : Kazal_1 (HMM E-Value=3.4e-19)
Length = 69
Score = 29.5 bits (63), Expect = 0.91
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = -3
Query: 354 DQCLFNTPNILVISFSLPGIDGYSYGNQCSCGLVLCTINVT 232
D+C+ P I+ + G DG +YGN+C G C N T
Sbjct: 22 DKCVRPCP---AINDPVCGTDGKTYGNECMLGAATCHSNGT 59
>SB_12514| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 113
Score = 29.1 bits (62), Expect = 1.2
Identities = 19/76 (25%), Positives = 34/76 (44%)
Frame = +1
Query: 64 MLAEKEMPGLMACRRKYAPAKILKGARIAGSLHMTVQTAVLIETLIELGAEVQWSSSNIY 243
+L++ P +RKY K +A SL T+ + +++L AE++ +N +
Sbjct: 23 ILSDTFQPFYFKLQRKYYVNTTYKFRDLACSLKYTIGVCYVRNKVLDLSAEIRTYFNNTF 82
Query: 244 STQDEAAAALVAVGIP 291
S + A L IP
Sbjct: 83 SKRQTACQMLYRYLIP 98
>SB_39834| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 293
Score = 28.7 bits (61), Expect = 1.6
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -3
Query: 300 GIDGYSYGNQCSCGLVLCTINVT 232
G DG +YGN+C G C N T
Sbjct: 57 GTDGKTYGNKCMLGAATCRSNGT 79
>SB_21598| Best HMM Match : DUF1642 (HMM E-Value=9.6)
Length = 151
Score = 28.3 bits (60), Expect = 2.1
Identities = 12/29 (41%), Positives = 20/29 (68%), Gaps = 2/29 (6%)
Frame = +1
Query: 10 PPYKIADEKLAEWG--RKEIMLAEKEMPG 90
PP+ +A +L +WG RKE++ ++MPG
Sbjct: 119 PPHNVAVTELKDWGQFRKEVVKWLEKMPG 147
>SB_55598| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 668
Score = 26.2 bits (55), Expect = 8.5
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -2
Query: 334 TKYTRHQFLPSRHRWVFLRQPVQLRPRLVYY 242
T++ R + RHR LR+ V RPR + Y
Sbjct: 127 TRFMRTPSVMDRHRLWTLRKEVAFRPRRIIY 157
>SB_42079| Best HMM Match : L_lactis_RepB_C (HMM E-Value=0.16)
Length = 641
Score = 26.2 bits (55), Expect = 8.5
Identities = 13/57 (22%), Positives = 27/57 (47%)
Frame = -3
Query: 288 YSYGNQCSCGLVLCTINVTAGPLYLCSQFY*SLNKNRCLYCHV*AAGYSGTFEYFSW 118
+SY N + G+++C + P+Y + SL K + +CH+ + + + W
Sbjct: 510 WSYDNLQNGGIIVCLVRTAQQPIYQTLKMLASL-KGKA-FCHICSEDVTDVIKENGW 564
>SB_40582| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 1568
Score = 26.2 bits (55), Expect = 8.5
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -3
Query: 300 GIDGYSYGNQCSCGLVLCTIN 238
G DG +Y N CS L CT N
Sbjct: 611 GTDGVTYDNLCSLRLKACTDN 631
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.317 0.133 0.400
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,377,837
Number of Sequences: 59808
Number of extensions: 241537
Number of successful extensions: 530
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 467
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 525
length of database: 16,821,457
effective HSP length: 74
effective length of database: 12,395,665
effective search space used: 607387585
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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