Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0187
         (718 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68760-1|CAA92994.1|  139|Caenorhabditis elegans Hypothetical pr...   118   4e-27
AF016430-1|AAB65370.1|  261|Caenorhabditis elegans Fk506-binding...    81   8e-16
U80445-9|AAB37799.1|  264|Caenorhabditis elegans Fk506-binding p...    73   2e-13
U80445-8|AAK68259.1|  300|Caenorhabditis elegans Fk506-binding p...    73   2e-13
U27353-1|AAA68610.1|  108|Caenorhabditis elegans rotamase protein.     72   4e-13
AL034393-20|CAA22330.1|  108|Caenorhabditis elegans Hypothetical...    72   4e-13
Z92832-2|CAB07371.1|  431|Caenorhabditis elegans Hypothetical pr...    69   4e-12
AL034393-19|CAA22328.1|  290|Caenorhabditis elegans Hypothetical...    66   3e-11
Z75554-8|CAA99959.2|  259|Caenorhabditis elegans Hypothetical pr...    59   4e-09
AF067608-16|AAC17657.2|  318|Caenorhabditis elegans Fk506-bindin...    47   1e-05
AL032663-6|CAA21766.2|  349|Caenorhabditis elegans Hypothetical ...    30   1.9  

>Z68760-1|CAA92994.1|  139|Caenorhabditis elegans Hypothetical
           protein F36H1.1 protein.
          Length = 139

 Score =  118 bits (284), Expect = 4e-27
 Identities = 56/82 (68%), Positives = 60/82 (73%)
 Frame = +1

Query: 421 KLQIGIKKRPEDCSIKSRKGDLLHMHYTGTLDDGTEFDSSIPRGNPLTFKLGSGQVIKGW 600
           KLQIG+KKR E+C  KSRKGD LHMHYTGTL DGTEFDSS  R    TF LG G VIKGW
Sbjct: 26  KLQIGVKKRAENCVQKSRKGDQLHMHYTGTLLDGTEFDSSRTRNEEFTFTLGQGNVIKGW 85

Query: 601 DQGLLGMCEGEQRKLVXSTGIG 666
           DQGLL MC GE+R L     +G
Sbjct: 86  DQGLLNMCVGERRILTIPPHLG 107



 Score = 37.1 bits (82), Expect = 0.013
 Identities = 16/32 (50%), Positives = 20/32 (62%)
 Frame = +2

Query: 620 CAKENNVNLSXPPELAYGSAGAPPKIPKSATL 715
           C  E  + L+ PP L YG  GAPPKIP ++ L
Sbjct: 93  CVGERRI-LTIPPHLGYGERGAPPKIPGNSVL 123


>AF016430-1|AAB65370.1|  261|Caenorhabditis elegans Fk506-binding
           protein family protein3 protein.
          Length = 261

 Score = 81.0 bits (191), Expect = 8e-16
 Identities = 38/75 (50%), Positives = 49/75 (65%)
 Frame = +1

Query: 424 LQIGIKKRPEDCSIKSRKGDLLHMHYTGTLDDGTEFDSSIPRGNPLTFKLGSGQVIKGWD 603
           + I I    E C+ K++ GD LH  YT  L+DG+  DSS  R  P  FK+GSGQVIKG D
Sbjct: 148 VHIHITHEVEGCTEKAQAGDTLHQQYTLNLEDGSFIDSSWSRNRPFIFKMGSGQVIKGMD 207

Query: 604 QGLLGMCEGEQRKLV 648
             + GMC+GE+RK+V
Sbjct: 208 IAMEGMCQGEKRKVV 222



 Score = 54.8 bits (126), Expect = 6e-08
 Identities = 30/76 (39%), Positives = 41/76 (53%)
 Frame = +1

Query: 421 KLQIGIKKRPEDCSIKSRKGDLLHMHYTGTLDDGTEFDSSIPRGNPLTFKLGSGQVIKGW 600
           K++I  K     C IKS  GD L   Y  +  +G    S+  +  P TF LG G+VI G 
Sbjct: 29  KIEIIKKIGDSKCKIKSESGDQLEQFYKLSDKEGKVIGSNFGQ-KPYTFTLGKGEVIHGM 87

Query: 601 DQGLLGMCEGEQRKLV 648
           +  + GMC GEQRK++
Sbjct: 88  EIAMEGMCVGEQRKVI 103



 Score = 32.7 bits (71), Expect = 0.27
 Identities = 17/46 (36%), Positives = 26/46 (56%)
 Frame = +2

Query: 578 LVKLLRVGIKGYLECAKENNVNLSXPPELAYGSAGAPPKIPKSATL 715
           ++K + + ++G  +  K   V    PPELAYG  G PP IP ++ L
Sbjct: 202 VIKGMDIAMEGMCQGEKRKVV---IPPELAYGENGRPPAIPGNSYL 244


>U80445-9|AAB37799.1|  264|Caenorhabditis elegans Fk506-binding
           protein family protein5, isoform a protein.
          Length = 264

 Score = 72.9 bits (171), Expect = 2e-13
 Identities = 35/75 (46%), Positives = 45/75 (60%)
 Frame = +1

Query: 442 KRPEDCSIKSRKGDLLHMHYTGTLDDGTEFDSSIPRGNPLTFKLGSGQVIKGWDQGLLGM 621
           K  ED   KS+ GD +H  Y   L+DGT  DSS  R  P  FKL + +VIKG D  + GM
Sbjct: 159 KIDEDKCKKSKSGDTIHQQYVLHLEDGTFVDSSFSRNAPFIFKLNNNEVIKGMDIAMTGM 218

Query: 622 CEGEQRKLVXSTGIG 666
           CEGE+R++V  +  G
Sbjct: 219 CEGERRQVVIPSDFG 233



 Score = 65.3 bits (152), Expect = 4e-11
 Identities = 32/74 (43%), Positives = 45/74 (60%)
 Frame = +1

Query: 445 RPEDCSIKSRKGDLLHMHYTGTLDDGTEFDSSIPRGNPLTFKLGSGQVIKGWDQGLLGMC 624
           + E C IKS+ GD+L   Y  +  DG E  S+  +  P TF LG GQVI G ++ + GMC
Sbjct: 39  KAEKCPIKSQDGDVLDQWYKLSDKDGKEIGSNFNK-KPYTFTLGKGQVIPGMERAMTGMC 97

Query: 625 EGEQRKLVXSTGIG 666
           +GE+RK+V    +G
Sbjct: 98  KGEKRKVVIPGNLG 111


>U80445-8|AAK68259.1|  300|Caenorhabditis elegans Fk506-binding
           protein family protein5, isoform b protein.
          Length = 300

 Score = 72.9 bits (171), Expect = 2e-13
 Identities = 35/75 (46%), Positives = 45/75 (60%)
 Frame = +1

Query: 442 KRPEDCSIKSRKGDLLHMHYTGTLDDGTEFDSSIPRGNPLTFKLGSGQVIKGWDQGLLGM 621
           K  ED   KS+ GD +H  Y   L+DGT  DSS  R  P  FKL + +VIKG D  + GM
Sbjct: 195 KIDEDKCKKSKSGDTIHQQYVLHLEDGTFVDSSFSRNAPFIFKLNNNEVIKGMDIAMTGM 254

Query: 622 CEGEQRKLVXSTGIG 666
           CEGE+R++V  +  G
Sbjct: 255 CEGERRQVVIPSDFG 269



 Score = 65.3 bits (152), Expect = 4e-11
 Identities = 32/74 (43%), Positives = 45/74 (60%)
 Frame = +1

Query: 445 RPEDCSIKSRKGDLLHMHYTGTLDDGTEFDSSIPRGNPLTFKLGSGQVIKGWDQGLLGMC 624
           + E C IKS+ GD+L   Y  +  DG E  S+  +  P TF LG GQVI G ++ + GMC
Sbjct: 75  KAEKCPIKSQDGDVLDQWYKLSDKDGKEIGSNFNK-KPYTFTLGKGQVIPGMERAMTGMC 133

Query: 625 EGEQRKLVXSTGIG 666
           +GE+RK+V    +G
Sbjct: 134 KGEKRKVVIPGNLG 147


>U27353-1|AAA68610.1|  108|Caenorhabditis elegans rotamase protein.
          Length = 108

 Score = 72.1 bits (169), Expect = 4e-13
 Identities = 32/67 (47%), Positives = 42/67 (62%)
 Frame = +1

Query: 466 KSRKGDLLHMHYTGTLDDGTEFDSSIPRGNPLTFKLGSGQVIKGWDQGLLGMCEGEQRKL 645
           K + G  +  HY  TL++G + DSS  RG P  FK+G G+VIKGWDQG+  M  GE+ KL
Sbjct: 16  KPKNGQTVTCHYVLTLENGKKIDSSRDRGTPFKFKIGKGEVIKGWDQGVAQMSVGEKSKL 75

Query: 646 VXSTGIG 666
             S  +G
Sbjct: 76  TISADLG 82



 Score = 30.3 bits (65), Expect = 1.4
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = +2

Query: 605 KGYLECAKENNVNLSXPPELAYGSAGAPPKIPKSATL 715
           +G  + +      L+   +L YG  G PP+IP +ATL
Sbjct: 62  QGVAQMSVGEKSKLTISADLGYGPRGVPPQIPANATL 98


>AL034393-20|CAA22330.1|  108|Caenorhabditis elegans Hypothetical
           protein Y18D10A.19 protein.
          Length = 108

 Score = 72.1 bits (169), Expect = 4e-13
 Identities = 32/67 (47%), Positives = 42/67 (62%)
 Frame = +1

Query: 466 KSRKGDLLHMHYTGTLDDGTEFDSSIPRGNPLTFKLGSGQVIKGWDQGLLGMCEGEQRKL 645
           K + G  +  HY  TL++G + DSS  RG P  FK+G G+VIKGWDQG+  M  GE+ KL
Sbjct: 16  KPKNGQTVTCHYVLTLENGKKIDSSRDRGTPFKFKIGKGEVIKGWDQGVAQMSVGEKSKL 75

Query: 646 VXSTGIG 666
             S  +G
Sbjct: 76  TISADLG 82



 Score = 30.3 bits (65), Expect = 1.4
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = +2

Query: 605 KGYLECAKENNVNLSXPPELAYGSAGAPPKIPKSATL 715
           +G  + +      L+   +L YG  G PP+IP +ATL
Sbjct: 62  QGVAQMSVGEKSKLTISADLGYGPRGVPPQIPANATL 98


>Z92832-2|CAB07371.1|  431|Caenorhabditis elegans Hypothetical
           protein F31D4.3 protein.
          Length = 431

 Score = 68.5 bits (160), Expect = 4e-12
 Identities = 33/77 (42%), Positives = 46/77 (59%)
 Frame = +1

Query: 436 IKKRPEDCSIKSRKGDLLHMHYTGTLDDGTEFDSSIPRGNPLTFKLGSGQVIKGWDQGLL 615
           IKK  +   +K   G  + +HY GTL++GT+FDSS  RG+  +F LG G VIKGWD G+ 
Sbjct: 20  IKKEGQGV-VKPTTGTTVKVHYVGTLENGTKFDSSRDRGDQFSFNLGRGNVIKGWDLGVA 78

Query: 616 GMCEGEQRKLVXSTGIG 666
            M +GE  +    +  G
Sbjct: 79  TMTKGEVAEFTIRSDYG 95



 Score = 30.7 bits (66), Expect = 1.1
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = +2

Query: 659 ELAYGSAGAPPKIPKSATL 715
           +  YG AG+PPKIP  ATL
Sbjct: 93  DYGYGDAGSPPKIPGGATL 111


>AL034393-19|CAA22328.1|  290|Caenorhabditis elegans Hypothetical
           protein Y18D10A.25 protein.
          Length = 290

 Score = 65.7 bits (153), Expect = 3e-11
 Identities = 31/67 (46%), Positives = 39/67 (58%)
 Frame = +1

Query: 466 KSRKGDLLHMHYTGTLDDGTEFDSSIPRGNPLTFKLGSGQVIKGWDQGLLGMCEGEQRKL 645
           KS+ G  +  HY   L DGT+ DSS  R  P  FK+G G+VIKGWDQG+  M   E+ KL
Sbjct: 212 KSKNGQTVTCHYVLILVDGTKIDSSRDRETPFKFKIGKGEVIKGWDQGVAQMSVKEKSKL 271

Query: 646 VXSTGIG 666
             +   G
Sbjct: 272 TIAPAFG 278



 Score = 31.9 bits (69), Expect = 0.47
 Identities = 19/57 (33%), Positives = 27/57 (47%)
 Frame = +1

Query: 463 IKSRKGDLLHMHYTGTLDDGTEFDSSIPRGNPLTFKLGSGQVIKGWDQGLLGMCEGE 633
           +    G L+  +    L D     S+    NP+ FK+G G+VI G D G+  M  GE
Sbjct: 97  VMPENGQLVQCYIEIKLADCYTSWSNYESQNPIIFKIGFGEVIPGLDIGIPKMKVGE 153


>Z75554-8|CAA99959.2|  259|Caenorhabditis elegans Hypothetical
           protein ZC455.10 protein.
          Length = 259

 Score = 58.8 bits (136), Expect = 4e-09
 Identities = 30/71 (42%), Positives = 41/71 (57%)
 Frame = +1

Query: 454 DCSIKSRKGDLLHMHYTGTLDDGTEFDSSIPRGNPLTFKLGSGQVIKGWDQGLLGMCEGE 633
           +C IKS  GD++  +Y  T + G E  S+  +  P TF LG  QVI G D+ + GMC GE
Sbjct: 44  ECEIKSAGGDVVDQYYKLTDEKGVEIGSNFGK-KPYTFTLGRNQVIPGMDRAMRGMCIGE 102

Query: 634 QRKLVXSTGIG 666
            RK+V    +G
Sbjct: 103 IRKVVIPPKLG 113



 Score = 57.6 bits (133), Expect = 8e-09
 Identities = 30/77 (38%), Positives = 42/77 (54%)
 Frame = +1

Query: 436 IKKRPEDCSIKSRKGDLLHMHYTGTLDDGTEFDSSIPRGNPLTFKLGSGQVIKGWDQGLL 615
           I K   D   K+  GD ++  Y   L+D T  DSS  R  P  F+L + +VI G D  + 
Sbjct: 152 IHKIEADKCKKAEAGDKIYQQYVLRLEDNTLVDSSYSRNAPFVFRLRNREVIDGMDIAMD 211

Query: 616 GMCEGEQRKLVXSTGIG 666
           GMCEGE+R++V  +  G
Sbjct: 212 GMCEGERRRVVIPSEYG 228



 Score = 29.9 bits (64), Expect = 1.9
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = +2

Query: 653 PPELAYGSAGAPPKIPKSATL 715
           P E  YGS G+PP+IP  A L
Sbjct: 224 PSEYGYGSQGSPPEIPGGARL 244


>AF067608-16|AAC17657.2|  318|Caenorhabditis elegans Fk506-binding
           protein family protein7 protein.
          Length = 318

 Score = 47.2 bits (107), Expect = 1e-05
 Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
 Frame = +1

Query: 424 LQIGIKKR--PEDCSIKSRKGDLLHMHYTGTLDDGTEFDSSIPRGNPLTFKLGSGQVIKG 597
           L I I+K   P  C  ++++ D +  HY    +D  +   +   G P+T +LG+G ++ G
Sbjct: 73  LDIKIEKTFVPAKCPQQAKRLDFVTFHYKVFTEDNKKVYQTYGTG-PVTIQLGTGMIMPG 131

Query: 598 WDQGLLGMCEGEQRKL 645
            D+GL GMC  E RK+
Sbjct: 132 LDKGLKGMCAEELRKV 147


>AL032663-6|CAA21766.2|  349|Caenorhabditis elegans Hypothetical
           protein Y75B12B.7 protein.
          Length = 349

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = +2

Query: 422 NYKLALRKDLRTVPSRAAKEIFCICTTLAL*MTVQNLIVQFLE 550
           ++ + +RK LR+ P  +   + CIC  L L    QN I   LE
Sbjct: 36  HFSILIRKSLRSSPVFSMMFVICICDLLQLLTQTQNDIKYILE 78


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,050,354
Number of Sequences: 27780
Number of extensions: 249301
Number of successful extensions: 538
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 512
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 531
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1676746902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)